RNA–Protein interactions for RNA: ENST00000252108.7

UBE4A-201, Transcript of ubiquitination factor E4A, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE4A, Length 6,103 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4A-201ENST00000252108 SPATA31B1PQ5VZV4 182 aa3.36□□□□□ -1.87
UBE4A-201ENST00000252108 UNQ5815/PRO19632Q6UWF5 114 aa3.36□□□□□ -1.87
UBE4A-201ENST00000252108 SPACA3Q8IXA5 215 aa3.36□□□□□ -1.87
UBE4A-201ENST00000252108 TPRX1Q8N7U7 411 aa3.36□□□□□ -1.87
UBE4A-201ENST00000252108 DUX5Q96PT3 197 aa3.36□□□□□ -1.87
UBE4A-201ENST00000252108 SSBP3Q9BWW4 388 aaPredicted RBP3.36□□□□□ -1.87
UBE4A-201ENST00000252108 CST9LQ9H4G1 147 aa3.36□□□□□ -1.87
UBE4A-201ENST00000252108 CSMD1Q96PZ7 3565 aa3.36□□□□□ -1.87
UBE4A-201ENST00000252108 MBD3L4A6NDZ8 208 aaPredicted RBP3.36□□□□□ -1.87
UBE4A-201ENST00000252108 MBD3L3A6NE82 208 aaPredicted RBP3.36□□□□□ -1.87
UBE4A-201ENST00000252108 MBD3L5A6NJ08 208 aaPredicted RBP3.36□□□□□ -1.87
UBE4A-201ENST00000252108 TCRAP04437 139 aa3.36□□□□□ -1.87
UBE4A-201ENST00000252108 LDLRAD2Q5SZI1 272 aa3.36□□□□□ -1.87
UBE4A-201ENST00000252108 CCDC144NLQ6NUI1 221 aa3.36□□□□□ -1.87
UBE4A-201ENST00000252108 C22orf34Q6ZV56 151 aa3.36□□□□□ -1.87
UBE4A-201ENST00000252108 PRNTQ86SH4 94 aa3.36□□□□□ -1.87
UBE4A-201ENST00000252108 TTC9CQ8N5M4 171 aa3.36□□□□□ -1.87
UBE4A-201ENST00000252108 CD177Q8N6Q3 437 aa3.36□□□□□ -1.87
UBE4A-201ENST00000252108 STPG4Q8N801 248 aa3.36□□□□□ -1.87
UBE4A-201ENST00000252108 MBD3L2Q8NHZ7 208 aaPredicted RBP3.36□□□□□ -1.87
UBE4A-201ENST00000252108 FAM168AQ92567 244 aa3.36□□□□□ -1.87
UBE4A-201ENST00000252108 IGF2BP2-AS1Q96M15 143 aa3.36□□□□□ -1.87
UBE4A-201ENST00000252108 OTOGLQ3ZCN5 2332 aa3.36□□□□□ -1.87
UBE4A-201ENST00000252108 RBP4P02753 201 aa3.36□□□□□ -1.87
UBE4A-201ENST00000252108 CEACAM8P31997 349 aaPredicted RBP3.36□□□□□ -1.87
UBE4A-201ENST00000252108 SRSF12Q8WXF0 261 aaKnown RBP3.36□□□□□ -1.87
UBE4A-201ENST00000252108 RAX2Q96IS3 184 aa3.36□□□□□ -1.87
UBE4A-201ENST00000252108 PRELID3AQ96N28 172 aa3.36□□□□□ -1.87
UBE4A-201ENST00000252108 PRRC2CQ9Y520 2896 aaKnown RBP3.35□□□□□ -1.87
UBE4A-201ENST00000252108 IGHV3-64DA0A0J9YX35 117 aa3.35□□□□□ -1.87
UBE4A-201ENST00000252108 PSMB11A5LHX3 300 aa3.35□□□□□ -1.87
UBE4A-201ENST00000252108 TMEM262E9PQX1 116 aa3.35□□□□□ -1.87
UBE4A-201ENST00000252108 C16orf97H3BN30 126 aa3.35□□□□□ -1.87
UBE4A-201ENST00000252108 CKS2P33552 79 aa3.35□□□□□ -1.87
UBE4A-201ENST00000252108 RHOGP84095 191 aa3.35□□□□□ -1.87
UBE4A-201ENST00000252108 TAL2Q16559 108 aa3.35□□□□□ -1.87
UBE4A-201ENST00000252108 SPRNQ5BIV9 151 aa3.35□□□□□ -1.87
UBE4A-201ENST00000252108 SPATA12Q7Z6I5 190 aa3.35□□□□□ -1.87
UBE4A-201ENST00000252108 ATOH7Q8N100 152 aa3.35□□□□□ -1.87
UBE4A-201ENST00000252108 TMEM75Q8N9X5 138 aa3.35□□□□□ -1.87
UBE4A-201ENST00000252108 OR8A1Q8NGG7 326 aa3.35□□□□□ -1.87
UBE4A-201ENST00000252108 ARPC1AQ92747 370 aa3.35□□□□□ -1.87
UBE4A-201ENST00000252108 MRAP2Q96G30 205 aa3.35□□□□□ -1.87
UBE4A-201ENST00000252108 NDUFA4L2Q9NRX3 87 aa3.35□□□□□ -1.87
UBE4A-201ENST00000252108 KLF12Q9Y4X4 402 aa3.35□□□□□ -1.87
UBE4A-201ENST00000252108 GGTLC3B5MD39 225 aa3.35□□□□□ -1.87
UBE4A-201ENST00000252108 F2Z2F3 143 aa3.35□□□□□ -1.87
UBE4A-201ENST00000252108 PRSS1P07477 247 aa3.35□□□□□ -1.87
UBE4A-201ENST00000252108 PAX2Q02962 417 aa3.35□□□□□ -1.87
UBE4A-201ENST00000252108 ZNF833PQ6ZTB9 187 aa3.35□□□□□ -1.87
UBE4A-201ENST00000252108 VKORC1L1Q8N0U8 176 aa3.35□□□□□ -1.87
UBE4A-201ENST00000252108 INSIG2Q9Y5U4 225 aa3.35□□□□□ -1.87
UBE4A-201ENST00000252108 C9orf118A6NHY6 69 aa3.35□□□□□ -1.87
UBE4A-201ENST00000252108 FOXH1O75593 365 aa3.35□□□□□ -1.87
UBE4A-201ENST00000252108 CDK2AP2O75956 126 aa3.35□□□□□ -1.87
UBE4A-201ENST00000252108 CSN3P07498 182 aa3.35□□□□□ -1.87
UBE4A-201ENST00000252108 IGLL1P15814 213 aa3.35□□□□□ -1.87
UBE4A-201ENST00000252108 MFAP4P55083 255 aa3.35□□□□□ -1.87
UBE4A-201ENST00000252108 BVES-AS1Q5T3Y7 98 aa3.35□□□□□ -1.87
UBE4A-201ENST00000252108 TMEM116Q8NCL8 245 aa3.35□□□□□ -1.87
UBE4A-201ENST00000252108 FAM215AQ9Y5M1 114 aa3.35□□□□□ -1.87
UBE4A-201ENST00000252108 SPCS1Q9Y6A9 102 aa3.35□□□□□ -1.87
UBE4A-201ENST00000252108 SVEP1Q4LDE5 3571 aa3.35□□□□□ -1.87
UBE4A-201ENST00000252108 IGHV3OR15-7A0A075B7D8 119 aa3.35□□□□□ -1.87
UBE4A-201ENST00000252108 IGHV3OR16-10A0A075B7F0 116 aa3.35□□□□□ -1.87
UBE4A-201ENST00000252108 ZNHIT1O43257 154 aa3.35□□□□□ -1.87
UBE4A-201ENST00000252108 GNG7O60262 68 aa3.35□□□□□ -1.87
UBE4A-201ENST00000252108 GNLYP22749 145 aa3.35□□□□□ -1.87
UBE4A-201ENST00000252108 ZNF137PP52743 207 aa3.35□□□□□ -1.87
UBE4A-201ENST00000252108 RPL24P83731 157 aaKnown RBP3.35□□□□□ -1.87
UBE4A-201ENST00000252108 PRSS8Q16651 343 aa3.35□□□□□ -1.87
UBE4A-201ENST00000252108 MPV17L2Q567V2 206 aa3.35□□□□□ -1.87
UBE4A-201ENST00000252108 PAPPA-AS1Q5QFB9 102 aa3.35□□□□□ -1.87
UBE4A-201ENST00000252108 YLPM1P49750 1951 aaKnown RBP3.35□□□□□ -1.87
UBE4A-201ENST00000252108 TRBV20OR9-2A0A075B6H5 130 aa3.35□□□□□ -1.87
UBE4A-201ENST00000252108 GAGE12BA1L429 117 aa3.35□□□□□ -1.87
UBE4A-201ENST00000252108 PLPPR2Q96GM1 343 aa3.35□□□□□ -1.87
UBE4A-201ENST00000252108 SLC25A15Q9Y619 301 aa3.35□□□□□ -1.87
UBE4A-201ENST00000252108 SDK1Q7Z5N4 2213 aa3.34□□□□□ -1.87
UBE4A-201ENST00000252108 IGKV1D-17A0A075B6S4 117 aa3.34□□□□□ -1.87
UBE4A-201ENST00000252108 NUPR1O60356 82 aa3.34□□□□□ -1.87
UBE4A-201ENST00000252108 EMP1P54849 157 aa3.34□□□□□ -1.87
UBE4A-201ENST00000252108 SRSF6Q13247 344 aaKnown RBP3.34□□□□□ -1.87
UBE4A-201ENST00000252108 AMMECR1LQ6DCA0 310 aa3.34□□□□□ -1.87
UBE4A-201ENST00000252108 C16orf54Q6UWD8 224 aa3.34□□□□□ -1.87
UBE4A-201ENST00000252108 Q86TA4 180 aa3.34□□□□□ -1.87
UBE4A-201ENST00000252108 IFI27L1Q96BM0 104 aa3.34□□□□□ -1.87
UBE4A-201ENST00000252108 CCL13Q99616 98 aa3.34□□□□□ -1.87
UBE4A-201ENST00000252108 MRPL20Q9BYC9 149 aaKnown RBP3.34□□□□□ -1.87
UBE4A-201ENST00000252108 USF3Q68DE3 2245 aa3.34□□□□□ -1.87
UBE4A-201ENST00000252108 IGHV1-18A0A0C4DH31 117 aa3.34□□□□□ -1.87
UBE4A-201ENST00000252108 GOLT1AQ6ZVE7 132 aa3.34□□□□□ -1.87
UBE4A-201ENST00000252108 K7EP34 96 aa3.34□□□□□ -1.87
UBE4A-201ENST00000252108 LTAP01374 205 aa3.34□□□□□ -1.87
UBE4A-201ENST00000252108 ZNF134P52741 427 aa3.34□□□□□ -1.87
UBE4A-201ENST00000252108 CACNG7P62955 275 aa3.34□□□□□ -1.87
UBE4A-201ENST00000252108 SLAQ13239 276 aa3.34□□□□□ -1.87
UBE4A-201ENST00000252108 LINC01545Q5VT33 79 aa3.34□□□□□ -1.87
UBE4A-201ENST00000252108 SAMD13Q5VXD3 122 aa3.34□□□□□ -1.87
UBE4A-201ENST00000252108 ZNRF1Q8ND25 227 aa3.34□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms