RNA–Protein interactions for RNA: ENST00000248139.7

RAB40C-201, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB40C, Length 2,699 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-201ENST00000248139 K7EIM0 57 aa20.21■□□□□ 0.83
RAB40C-201ENST00000248139 FMC1Q96HJ9 113 aa20.21■□□□□ 0.83
RAB40C-201ENST00000248139 HES1Q14469 280 aa20.21■□□□□ 0.83
RAB40C-201ENST00000248139 OR4B1Q8NGF8 309 aa20.21■□□□□ 0.83
RAB40C-201ENST00000248139 CCL21O00585 134 aa20.2■□□□□ 0.82
RAB40C-201ENST00000248139 CA7P43166 264 aa20.2■□□□□ 0.82
RAB40C-201ENST00000248139 SPATA12Q7Z6I5 190 aa20.2■□□□□ 0.82
RAB40C-201ENST00000248139 OR8B3Q8NGG8 313 aa20.2■□□□□ 0.82
RAB40C-201ENST00000248139 OR8B2Q96RD0 313 aa20.2■□□□□ 0.82
RAB40C-201ENST00000248139 ZNF138P52744 262 aa20.2■□□□□ 0.82
RAB40C-201ENST00000248139 PLP1P60201 277 aa20.2■□□□□ 0.82
RAB40C-201ENST00000248139 HBBP68871 147 aa20.2■□□□□ 0.82
RAB40C-201ENST00000248139 RASL11AQ6T310 242 aa20.2■□□□□ 0.82
RAB40C-201ENST00000248139 CHRDL1Q9BU40 450 aa20.2■□□□□ 0.82
RAB40C-201ENST00000248139 COL12A1Q99715 3063 aa20.2■□□□□ 0.82
RAB40C-201ENST00000248139 IGLV2-11P01706 119 aa20.2■□□□□ 0.82
RAB40C-201ENST00000248139 COL8A1P27658 744 aa20.2■□□□□ 0.82
RAB40C-201ENST00000248139 Q86TA4 180 aa20.2■□□□□ 0.82
RAB40C-201ENST00000248139 MRPL27Q9P0M9 148 aaKnown RBP20.2■□□□□ 0.82
RAB40C-201ENST00000248139 FAM181BA6NEQ2 426 aa20.19■□□□□ 0.82
RAB40C-201ENST00000248139 A8MWL6 223 aa20.19■□□□□ 0.82
RAB40C-201ENST00000248139 CYB5R2Q6BCY4 276 aa20.19■□□□□ 0.82
RAB40C-201ENST00000248139 ZNF785A8K8V0 405 aa20.19■□□□□ 0.82
RAB40C-201ENST00000248139 M0R3E3 92 aa20.19■□□□□ 0.82
RAB40C-201ENST00000248139 IGHV3-23P01764 117 aa20.19■□□□□ 0.82
RAB40C-201ENST00000248139 LINC00173Q6ZV60 143 aa20.19■□□□□ 0.82
RAB40C-201ENST00000248139 RBM14Q96PK6 669 aaKnown RBP20.18■□□□□ 0.82
RAB40C-201ENST00000248139 OR2J3O76001 311 aa20.18■□□□□ 0.82
RAB40C-201ENST00000248139 IL4P05112 153 aa20.18■□□□□ 0.82
RAB40C-201ENST00000248139 LIPFP07098 398 aa20.18■□□□□ 0.82
RAB40C-201ENST00000248139 CELSR1Q9NYQ6 3014 aa20.18■□□□□ 0.82
RAB40C-201ENST00000248139 TP73-AS1Q9UF72 201 aa20.18■□□□□ 0.82
RAB40C-201ENST00000248139 SPTBN4Q9H254 2564 aa20.17■□□□□ 0.82
RAB40C-201ENST00000248139 HTR1DP28221 377 aa20.17■□□□□ 0.82
RAB40C-201ENST00000248139 VPS13CQ709C8 3753 aa20.17■□□□□ 0.82
RAB40C-201ENST00000248139 RPLP1P05386 114 aaKnown RBP20.17■□□□□ 0.82
RAB40C-201ENST00000248139 FCGR2BP31994 310 aaPredicted RBP20.17■□□□□ 0.82
RAB40C-201ENST00000248139 OTORQ9NRC9 128 aa20.17■□□□□ 0.82
RAB40C-201ENST00000248139 KLF5Q13887 457 aaPredicted RBP20.16■□□□□ 0.82
RAB40C-201ENST00000248139 TXN2Q99757 166 aa20.16■□□□□ 0.82
RAB40C-201ENST00000248139 IGLC2P0DOY2 106 aa20.16■□□□□ 0.82
RAB40C-201ENST00000248139 IGLC3P0DOY3 106 aa20.16■□□□□ 0.82
RAB40C-201ENST00000248139 Q6ZN92 141 aa20.16■□□□□ 0.82
RAB40C-201ENST00000248139 TIMM8BQ9Y5J9 83 aaPredicted RBP20.16■□□□□ 0.82
RAB40C-201ENST00000248139 ZC2HC1AQ96GY0 325 aa20.15■□□□□ 0.82
RAB40C-201ENST00000248139 ATP5L2Q7Z4Y8 100 aa20.15■□□□□ 0.82
RAB40C-201ENST00000248139 ZNF491Q8N8L2 437 aa20.15■□□□□ 0.82
RAB40C-201ENST00000248139 MCRIP2Q9BUT9 160 aaKnown RBP20.15■□□□□ 0.82
RAB40C-201ENST00000248139 DPM3Q9P2X0 92 aa20.15■□□□□ 0.82
RAB40C-201ENST00000248139 NBR2O15453 112 aa20.14■□□□□ 0.82
RAB40C-201ENST00000248139 TPPP3Q9BW30 176 aa20.14■□□□□ 0.82
RAB40C-201ENST00000248139 CHD8Q9HCK8 2581 aa20.14■□□□□ 0.81
RAB40C-201ENST00000248139 IGHV3OR16-8A0A075B7F1 116 aa20.14■□□□□ 0.81
RAB40C-201ENST00000248139 RBPMS2Q6ZRY4 209 aaKnown RBP20.14■□□□□ 0.81
RAB40C-201ENST00000248139 DYNAPQ8N1N2 210 aa20.14■□□□□ 0.81
RAB40C-201ENST00000248139 C2orf70A6NJV1 201 aa20.13■□□□□ 0.81
RAB40C-201ENST00000248139 CFHR4Q92496 578 aa20.13■□□□□ 0.81
RAB40C-201ENST00000248139 NCOR2Q9Y618 2525 aa20.13■□□□□ 0.81
RAB40C-201ENST00000248139 TRBV19A0A075B6N1 114 aa20.13■□□□□ 0.81
RAB40C-201ENST00000248139 LPAR2Q9HBW0 351 aa20.13■□□□□ 0.81
RAB40C-201ENST00000248139 CSN3P07498 182 aa20.12■□□□□ 0.81
RAB40C-201ENST00000248139 LY6G5BQ8NDX9 201 aa20.12■□□□□ 0.81
RAB40C-201ENST00000248139 RNF125Q96EQ8 232 aa20.12■□□□□ 0.81
RAB40C-201ENST00000248139 SHANK2-AS3Q9BTD1 123 aa20.12■□□□□ 0.81
RAB40C-201ENST00000248139 TMEM208Q9BTX3 173 aa20.12■□□□□ 0.81
RAB40C-201ENST00000248139 ZNF492Q9P255 531 aa20.12■□□□□ 0.81
RAB40C-201ENST00000248139 NCBP2LA6PVI3 153 aaKnown RBP20.12■□□□□ 0.81
RAB40C-201ENST00000248139 NDPQ00604 133 aa20.12■□□□□ 0.81
RAB40C-201ENST00000248139 IGHV3-35A0A0C4DH35 117 aa20.11■□□□□ 0.81
RAB40C-201ENST00000248139 M0QZK8 103 aa20.11■□□□□ 0.81
RAB40C-201ENST00000248139 ZNF124Q15973 351 aa20.11■□□□□ 0.81
RAB40C-201ENST00000248139 BPIFA4PQ86YQ2 179 aa20.11■□□□□ 0.81
RAB40C-201ENST00000248139 SMIM12Q96EX1 92 aa20.11■□□□□ 0.81
RAB40C-201ENST00000248139 CHEK1O14757 476 aa20.11■□□□□ 0.81
RAB40C-201ENST00000248139 SIGLEC15Q6ZMC9 328 aa20.11■□□□□ 0.81
RAB40C-201ENST00000248139 TMEM14CQ9P0S9 112 aa20.11■□□□□ 0.81
RAB40C-201ENST00000248139 HLA-DRB1P01911 266 aa20.1■□□□□ 0.81
RAB40C-201ENST00000248139 NPSP0C0P6 89 aa20.1■□□□□ 0.81
RAB40C-201ENST00000248139 ARMS2P0C7Q2 107 aa20.1■□□□□ 0.81
RAB40C-201ENST00000248139 BTF3P20290 206 aaKnown RBP20.1■□□□□ 0.81
RAB40C-201ENST00000248139 ADORA2A-AS1P86434 159 aa20.1■□□□□ 0.81
RAB40C-201ENST00000248139 OR4F17Q8NGA8 305 aa20.1■□□□□ 0.81
RAB40C-201ENST00000248139 UQCR10Q9UDW1 63 aa20.1■□□□□ 0.81
RAB40C-201ENST00000248139 H0Y8G0 127 aa20.1■□□□□ 0.81
RAB40C-201ENST00000248139 H3BRN7 92 aa20.1■□□□□ 0.81
RAB40C-201ENST00000248139 NDUFS7O75251 213 aa20.1■□□□□ 0.81
RAB40C-201ENST00000248139 CRIP1P50238 77 aa20.1■□□□□ 0.81
RAB40C-201ENST00000248139 PAX2Q02962 417 aa20.1■□□□□ 0.81
RAB40C-201ENST00000248139 FAM120AOSQ5T036 256 aa20.1■□□□□ 0.81
RAB40C-201ENST00000248139 TMSB15BA0A087X1C1 80 aa20.09■□□□□ 0.81
RAB40C-201ENST00000248139 GNG7O60262 68 aa20.09■□□□□ 0.81
RAB40C-201ENST00000248139 HNRNPA3P51991 378 aaKnown RBP20.09■□□□□ 0.81
RAB40C-201ENST00000248139 STPG4Q8N801 248 aa20.09■□□□□ 0.81
RAB40C-201ENST00000248139 C8orf49Q96NF6 230 aa20.09■□□□□ 0.81
RAB40C-201ENST00000248139 SPTAN1Q13813 2472 aaKnown RBP20.09■□□□□ 0.81
RAB40C-201ENST00000248139 IGHV1-24A0A0C4DH33 117 aa20.09■□□□□ 0.81
RAB40C-201ENST00000248139 MUC21A0A0G2JKD1 596 aa20.09■□□□□ 0.81
RAB40C-201ENST00000248139 MUC21A0A140T8X8 626 aa20.09■□□□□ 0.81
RAB40C-201ENST00000248139 OVOL3O00110 214 aa20.09■□□□□ 0.81
RAB40C-201ENST00000248139 MUC21Q5SSG8 566 aa20.09■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 114.3 ms