RNA–Protein interactions for RNA: ENST00000243326.9

RIF1-201, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RIF1, Length 15,003 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-201ENST00000243326 CIRBPQ14011 172 aaKnown RBP6.18□□□□□ -1.42
RIF1-201ENST00000243326 GATD1Q8NB37 220 aa6.18□□□□□ -1.42
RIF1-201ENST00000243326 USP9XQ93008 2570 aaPredicted RBP6.18□□□□□ -1.42
RIF1-201ENST00000243326 A8MWV9 139 aa6.18□□□□□ -1.42
RIF1-201ENST00000243326 GAGE12BA1L429 117 aa6.18□□□□□ -1.42
RIF1-201ENST00000243326 TNFRSF6BO95407 300 aa6.18□□□□□ -1.42
RIF1-201ENST00000243326 CD28P10747 220 aa6.18□□□□□ -1.42
RIF1-201ENST00000243326 LHFPL1Q86WI0 220 aa6.18□□□□□ -1.42
RIF1-201ENST00000243326 PHLDA1Q8WV24 401 aaPredicted RBP6.18□□□□□ -1.42
RIF1-201ENST00000243326 ZNF726P1Q15940 193 aa6.18□□□□□ -1.42
RIF1-201ENST00000243326 ARPC1AQ92747 370 aa6.18□□□□□ -1.42
RIF1-201ENST00000243326 ATP5LO75964 103 aa6.18□□□□□ -1.42
RIF1-201ENST00000243326 GLRXP35754 106 aa6.18□□□□□ -1.42
RIF1-201ENST00000243326 NUPR1O60356 82 aa6.18□□□□□ -1.42
RIF1-201ENST00000243326 ZNF703Q9H7S9 590 aaPredicted RBP6.18□□□□□ -1.42
RIF1-201ENST00000243326 LOC102723996A0A087X1L8 192 aa6.18□□□□□ -1.42
RIF1-201ENST00000243326 CFHR3Q02985 330 aa6.18□□□□□ -1.42
RIF1-201ENST00000243326 CHAC1Q9BUX1 264 aa6.18□□□□□ -1.42
RIF1-201ENST00000243326 ST20Q9HBF5 79 aa6.18□□□□□ -1.42
RIF1-201ENST00000243326 C21orf140B9A014 251 aa6.18□□□□□ -1.42
RIF1-201ENST00000243326 CEACAM8P31997 349 aaPredicted RBP6.18□□□□□ -1.42
RIF1-201ENST00000243326 TCF15Q12870 199 aa6.18□□□□□ -1.42
RIF1-201ENST00000243326 CCDC144NLQ6NUI1 221 aa6.18□□□□□ -1.42
RIF1-201ENST00000243326 JMJD1CQ15652 2540 aa6.18□□□□□ -1.42
RIF1-201ENST00000243326 DUX4L9Q6RFH8 374 aaPredicted RBP6.18□□□□□ -1.42
RIF1-201ENST00000243326 TDGF1P13385 188 aa6.17□□□□□ -1.42
RIF1-201ENST00000243326 FAM89BQ8N5H3 189 aa6.17□□□□□ -1.42
RIF1-201ENST00000243326 DUTP33316 252 aaKnown RBP6.17□□□□□ -1.42
RIF1-201ENST00000243326 IMMP1LQ96LU5 166 aa6.17□□□□□ -1.42
RIF1-201ENST00000243326 CENPVQ7Z7K6 275 aaPredicted RBP6.17□□□□□ -1.42
RIF1-201ENST00000243326 RCHY1Q96PM5 261 aa6.17□□□□□ -1.42
RIF1-201ENST00000243326 C1QTNF5Q9BXJ0 243 aa6.17□□□□□ -1.42
RIF1-201ENST00000243326 LINC00173Q6ZV60 143 aa6.17□□□□□ -1.42
RIF1-201ENST00000243326 CLPSP04118 112 aa6.17□□□□□ -1.42
RIF1-201ENST00000243326 OR4X2Q8NGF9 303 aa6.17□□□□□ -1.42
RIF1-201ENST00000243326 RNF125Q96EQ8 232 aa6.17□□□□□ -1.42
RIF1-201ENST00000243326 ADARB2-AS1A8MUL3 147 aa6.17□□□□□ -1.42
RIF1-201ENST00000243326 RAB9AP51151 201 aa6.17□□□□□ -1.42
RIF1-201ENST00000243326 RNASE13Q5GAN3 156 aaKnown RBP6.17□□□□□ -1.42
RIF1-201ENST00000243326 C9JAW5 83 aa6.17□□□□□ -1.42
RIF1-201ENST00000243326 GAGE1Q13065 139 aa6.17□□□□□ -1.42
RIF1-201ENST00000243326 CD177Q8N6Q3 437 aa6.17□□□□□ -1.42
RIF1-201ENST00000243326 NDUFA2O43678 99 aa6.17□□□□□ -1.42
RIF1-201ENST00000243326 GAGE2AQ6NT46 116 aa6.17□□□□□ -1.42
RIF1-201ENST00000243326 IGHV1-18A0A0C4DH31 117 aa6.17□□□□□ -1.42
RIF1-201ENST00000243326 ZFAND6Q6FIF0 208 aa6.17□□□□□ -1.42
RIF1-201ENST00000243326 ZNF329Q86UD4 541 aa6.17□□□□□ -1.42
RIF1-201ENST00000243326 KNCNA6PVL3 124 aa6.16□□□□□ -1.42
RIF1-201ENST00000243326 TIMM23O14925 209 aa6.16□□□□□ -1.42
RIF1-201ENST00000243326 RHOGP84095 191 aa6.16□□□□□ -1.42
RIF1-201ENST00000243326 LIME1Q9H400 295 aa6.16□□□□□ -1.42
RIF1-201ENST00000243326 NOTCH4Q99466 2003 aa6.16□□□□□ -1.42
RIF1-201ENST00000243326 GAGE2EQ4V326 116 aa6.16□□□□□ -1.42
RIF1-201ENST00000243326 TMEM101Q96IK0 257 aa6.16□□□□□ -1.42
RIF1-201ENST00000243326 GAGE2DQ9UEU5 116 aa6.16□□□□□ -1.42
RIF1-201ENST00000243326 CFHR1Q03591 330 aa6.16□□□□□ -1.42
RIF1-201ENST00000243326 CCL25O15444 150 aa6.16□□□□□ -1.42
RIF1-201ENST00000243326 EFEMP2O95967 443 aa6.16□□□□□ -1.42
RIF1-201ENST00000243326 HELZP42694 1942 aaKnown RBP6.16□□□□□ -1.42
RIF1-201ENST00000243326 ARMS2P0C7Q2 107 aa6.16□□□□□ -1.42
RIF1-201ENST00000243326 COLCA1Q6ZS62 124 aa6.16□□□□□ -1.42
RIF1-201ENST00000243326 VCX2Q9H322 139 aa6.16□□□□□ -1.42
RIF1-201ENST00000243326 CCL1P22362 96 aa6.16□□□□□ -1.42
RIF1-201ENST00000243326 ERVK11-1P61568 191 aa6.16□□□□□ -1.42
RIF1-201ENST00000243326 CLEC2AQ6UVW9 174 aa6.16□□□□□ -1.42
RIF1-201ENST00000243326 Q6ZT83 130 aa6.16□□□□□ -1.42
RIF1-201ENST00000243326 PNRC2Q9NPJ4 139 aaKnown RBP6.16□□□□□ -1.42
RIF1-201ENST00000243326 GAGE2BQ13066 116 aa6.16□□□□□ -1.42
RIF1-201ENST00000243326 AMTNQ6UX39 209 aa6.16□□□□□ -1.42
RIF1-201ENST00000243326 A0A1W2PR77 199 aa6.15□□□□□ -1.42
RIF1-201ENST00000243326 USP24Q9UPU5 2620 aa6.15□□□□□ -1.42
RIF1-201ENST00000243326 IGHV3-16A0A0C4DH30 117 aa6.15□□□□□ -1.42
RIF1-201ENST00000243326 IGKV1-6A0A0C4DH72 117 aa6.15□□□□□ -1.42
RIF1-201ENST00000243326 AZU1P20160 251 aa6.15□□□□□ -1.42
RIF1-201ENST00000243326 FAM106AQ4KMX7 169 aa6.15□□□□□ -1.42
RIF1-201ENST00000243326 SFXN3Q9BWM7 321 aa6.15□□□□□ -1.42
RIF1-201ENST00000243326 TRAV40A0A0B4J280 105 aa6.15□□□□□ -1.42
RIF1-201ENST00000243326 TP73-AS1Q9UF72 201 aa6.15□□□□□ -1.42
RIF1-201ENST00000243326 ZNF415Q09FC8 603 aa6.15□□□□□ -1.42
RIF1-201ENST00000243326 FHL1Q13642 323 aa6.15□□□□□ -1.42
RIF1-201ENST00000243326 ARTNQ5T4W7 220 aa6.15□□□□□ -1.42
RIF1-201ENST00000243326 C2orf82Q6UX34 121 aa6.15□□□□□ -1.42
RIF1-201ENST00000243326 RIPPLY2Q5TAB7 128 aa6.15□□□□□ -1.42
RIF1-201ENST00000243326 NABP1Q96AH0 204 aa6.15□□□□□ -1.42
RIF1-201ENST00000243326 THSD7AQ9UPZ6 1657 aa6.15□□□□□ -1.42
RIF1-201ENST00000243326 SLAQ13239 276 aa6.15□□□□□ -1.42
RIF1-201ENST00000243326 LRRK2Q5S007 2527 aa6.15□□□□□ -1.43
RIF1-201ENST00000243326 ERG28Q9UKR5 140 aa6.15□□□□□ -1.43
RIF1-201ENST00000243326 PSMG4Q5JS54 123 aa6.15□□□□□ -1.43
RIF1-201ENST00000243326 TMEM144Q7Z5S9 345 aa6.15□□□□□ -1.43
RIF1-201ENST00000243326 C15orf62A8K5M9 175 aa6.15□□□□□ -1.43
RIF1-201ENST00000243326 C8orf46Q8TAG6 207 aa6.15□□□□□ -1.43
RIF1-201ENST00000243326 TMEM133Q9H2Q1 129 aa6.15□□□□□ -1.43
RIF1-201ENST00000243326 WDR83OSQ9Y284 106 aa6.15□□□□□ -1.43
RIF1-201ENST00000243326 SAP30O75446 220 aa6.15□□□□□ -1.43
RIF1-201ENST00000243326 SRSF1Q07955 248 aaKnown RBP eCLIP6.15□□□□□ -1.431e-6■■■■□ 20.6
RIF1-201ENST00000243326 LYPD2Q6UXB3 125 aa6.15□□□□□ -1.43
RIF1-201ENST00000243326 GGNQ86UU5 652 aa6.15□□□□□ -1.43
RIF1-201ENST00000243326 C14orf178Q8N769 122 aaPredicted RBP6.15□□□□□ -1.43
RIF1-201ENST00000243326 WNT2P09544 360 aa6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 91.5 ms