RNA–Protein interactions for RNA: ENST00000222402.7

UBE2D4-201, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE2D4, Length 3,974 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-201ENST00000222402 M0R3E3 92 aa11.95□□□□□ -0.5
UBE2D4-201ENST00000222402 FAM106CPP0CH98 169 aa11.94□□□□□ -0.5
UBE2D4-201ENST00000222402 RPL7P18124 248 aaKnown RBP11.94□□□□□ -0.5
UBE2D4-201ENST00000222402 NBL1P41271 181 aa11.94□□□□□ -0.5
UBE2D4-201ENST00000222402 PVRIGQ6DKI7 326 aa11.94□□□□□ -0.5
UBE2D4-201ENST00000222402 NIT1Q86X76 327 aa11.94□□□□□ -0.5
UBE2D4-201ENST00000222402 C8orf31Q8N9H6 132 aa11.94□□□□□ -0.5
UBE2D4-201ENST00000222402 TMEM70Q9BUB7 260 aa11.94□□□□□ -0.5
UBE2D4-201ENST00000222402 TDRG1Q3Y452 100 aa11.94□□□□□ -0.5
UBE2D4-201ENST00000222402 IGF2BP2-AS1Q96M15 143 aa11.94□□□□□ -0.5
UBE2D4-201ENST00000222402 HIF1ANQ9NWT6 349 aa11.94□□□□□ -0.5
UBE2D4-201ENST00000222402 PSG8Q9UQ74 426 aa11.94□□□□□ -0.5
UBE2D4-201ENST00000222402 SMIM15Q7Z3B0 74 aa11.94□□□□□ -0.5
UBE2D4-201ENST00000222402 NEU4Q8WWR8 484 aaPredicted RBP11.94□□□□□ -0.5
UBE2D4-201ENST00000222402 AP1S3Q96PC3 154 aa11.94□□□□□ -0.5
UBE2D4-201ENST00000222402 TOMM40O96008 361 aa11.93□□□□□ -0.5
UBE2D4-201ENST00000222402 ATP5L2Q7Z4Y8 100 aa11.93□□□□□ -0.5
UBE2D4-201ENST00000222402 RABAC1Q9UI14 185 aa11.93□□□□□ -0.5
UBE2D4-201ENST00000222402 IGKV1D-37A0A075B6S9 117 aa11.93□□□□□ -0.5
UBE2D4-201ENST00000222402 OR5AL1P0C617 328 aa11.93□□□□□ -0.5
UBE2D4-201ENST00000222402 IGLC1P0CG04 106 aa11.93□□□□□ -0.5
UBE2D4-201ENST00000222402 RELQ04864 619 aaPredicted RBP11.93□□□□□ -0.5
UBE2D4-201ENST00000222402 CHD8Q9HCK8 2581 aa11.93□□□□□ -0.5
UBE2D4-201ENST00000222402 C5orf64Q2M2E5 130 aa11.93□□□□□ -0.5
UBE2D4-201ENST00000222402 RASL11AQ6T310 242 aa11.93□□□□□ -0.5
UBE2D4-201ENST00000222402 FAM231DQ6ZW35 169 aa11.93□□□□□ -0.5
UBE2D4-201ENST00000222402 OR8A1Q8NGG7 326 aa11.93□□□□□ -0.5
UBE2D4-201ENST00000222402 IGHV3-49A0A0A0MS15 119 aa11.92□□□□□ -0.5
UBE2D4-201ENST00000222402 NUTF2P61970 127 aaKnown RBP11.92□□□□□ -0.5
UBE2D4-201ENST00000222402 RNF5Q99942 180 aa11.92□□□□□ -0.5
UBE2D4-201ENST00000222402 SOX21Q9Y651 276 aaPredicted RBP11.92□□□□□ -0.5
UBE2D4-201ENST00000222402 DMDP11532 3685 aa11.92□□□□□ -0.5
UBE2D4-201ENST00000222402 NHLH1Q02575 133 aa11.92□□□□□ -0.5
UBE2D4-201ENST00000222402 HSPB8Q9UJY1 196 aa11.92□□□□□ -0.5
UBE2D4-201ENST00000222402 CACNA1AO00555 2505 aa11.92□□□□□ -0.5
UBE2D4-201ENST00000222402 IGHV3-66A0A0C4DH42 116 aa11.92□□□□□ -0.5
UBE2D4-201ENST00000222402 CGB1A6NKQ9 187 aa11.92□□□□□ -0.5
UBE2D4-201ENST00000222402 A6NNC1 897 aa11.92□□□□□ -0.5
UBE2D4-201ENST00000222402 GOSR1O95249 250 aa11.92□□□□□ -0.5
UBE2D4-201ENST00000222402 GPR183P32249 361 aa11.92□□□□□ -0.5
UBE2D4-201ENST00000222402 TFPI2P48307 235 aa11.92□□□□□ -0.5
UBE2D4-201ENST00000222402 IGHV3OR16-10A0A075B7F0 116 aa11.91□□□□□ -0.5
UBE2D4-201ENST00000222402 IGLV2-8P01709 118 aa11.91□□□□□ -0.5
UBE2D4-201ENST00000222402 Q86TA4 180 aa11.91□□□□□ -0.5
UBE2D4-201ENST00000222402 OR4C46A6NHA9 309 aa11.91□□□□□ -0.5
UBE2D4-201ENST00000222402 IGLV1-47P01700 117 aa11.91□□□□□ -0.5
UBE2D4-201ENST00000222402 TCTAP57738 103 aa11.91□□□□□ -0.5
UBE2D4-201ENST00000222402 C11orf42Q8N5U0 333 aa11.91□□□□□ -0.5
UBE2D4-201ENST00000222402 AP5S1Q9NUS5 200 aa11.91□□□□□ -0.5
UBE2D4-201ENST00000222402 INS-IGF2F8WCM5 200 aa11.91□□□□□ -0.5
UBE2D4-201ENST00000222402 ZNF138P52744 262 aa11.91□□□□□ -0.5
UBE2D4-201ENST00000222402 VAMP3Q15836 100 aa11.91□□□□□ -0.5
UBE2D4-201ENST00000222402 LOC400499M0QZD8 3231 aa11.9□□□□□ -0.5
UBE2D4-201ENST00000222402 SH2D7A6NKC9 451 aaPredicted RBP11.9□□□□□ -0.5
UBE2D4-201ENST00000222402 TWIST1Q15672 202 aa11.9□□□□□ -0.5
UBE2D4-201ENST00000222402 MRPL27Q9P0M9 148 aaKnown RBP11.9□□□□□ -0.5
UBE2D4-201ENST00000222402 VMO1Q7Z5L0 202 aa11.9□□□□□ -0.5
UBE2D4-201ENST00000222402 PMCHL2Q9BQD1 86 aa11.9□□□□□ -0.5
UBE2D4-201ENST00000222402 GOLT1BQ9Y3E0 138 aa11.9□□□□□ -0.5
UBE2D4-201ENST00000222402 FAM181BA6NEQ2 426 aa11.9□□□□□ -0.5
UBE2D4-201ENST00000222402 J3KRW8 73 aa11.9□□□□□ -0.5
UBE2D4-201ENST00000222402 DMRTC2Q8IXT2 367 aaPredicted RBP11.9□□□□□ -0.5
UBE2D4-201ENST00000222402 C20orf144Q9BQM9 153 aa11.9□□□□□ -0.5
UBE2D4-201ENST00000222402 ZFP30Q9Y2G7 519 aa11.9□□□□□ -0.5
UBE2D4-201ENST00000222402 ZNF207O43670 478 aaKnown RBP11.89□□□□□ -0.51
UBE2D4-201ENST00000222402 APOHP02749 345 aaPredicted RBP11.89□□□□□ -0.51
UBE2D4-201ENST00000222402 LINC00614P0C842 121 aa11.89□□□□□ -0.51
UBE2D4-201ENST00000222402 PSG9Q00887 426 aa11.89□□□□□ -0.51
UBE2D4-201ENST00000222402 CYB5R2Q6BCY4 276 aa11.89□□□□□ -0.51
UBE2D4-201ENST00000222402 DLX6P56179 175 aa11.89□□□□□ -0.51
UBE2D4-201ENST00000222402 LY6DQ14210 128 aa11.89□□□□□ -0.51
UBE2D4-201ENST00000222402 C17orf77Q96MU5 243 aa11.89□□□□□ -0.51
UBE2D4-201ENST00000222402 SHANK2-AS3Q9BTD1 123 aa11.89□□□□□ -0.51
UBE2D4-201ENST00000222402 PRTN3P24158 256 aa11.89□□□□□ -0.51
UBE2D4-201ENST00000222402 TP53TG3Q9ULZ0 132 aa11.89□□□□□ -0.51
UBE2D4-201ENST00000222402 ACACBO00763 2458 aa11.89□□□□□ -0.51
UBE2D4-201ENST00000222402 IGKV3-7A0A075B6H7 116 aa11.88□□□□□ -0.51
UBE2D4-201ENST00000222402 IGFL4Q6B9Z1 124 aa11.88□□□□□ -0.51
UBE2D4-201ENST00000222402 TEX43Q6ZNM6 134 aa11.88□□□□□ -0.51
UBE2D4-201ENST00000222402 ALKBH7Q9BT30 221 aaPredicted RBP11.88□□□□□ -0.51
UBE2D4-201ENST00000222402 CKS2P33552 79 aa11.88□□□□□ -0.51
UBE2D4-201ENST00000222402 JKAMPQ9P055 326 aa11.88□□□□□ -0.51
UBE2D4-201ENST00000222402 LAMTOR2Q9Y2Q5 125 aa11.88□□□□□ -0.51
UBE2D4-201ENST00000222402 COL27A1Q8IZC6 1860 aaPredicted RBP11.88□□□□□ -0.51
UBE2D4-201ENST00000222402 IGKV2-40A0A087WW87 121 aaPredicted RBP11.88□□□□□ -0.51
UBE2D4-201ENST00000222402 IGKV2D-40P01614 121 aaPredicted RBP11.88□□□□□ -0.51
UBE2D4-201ENST00000222402 GP9P14770 177 aa11.88□□□□□ -0.51
UBE2D4-201ENST00000222402 KIR2DL5BA0A0G2JN68 375 aa11.87□□□□□ -0.51
UBE2D4-201ENST00000222402 KIR2DL5BA0A0G2JPC4 375 aa11.87□□□□□ -0.51
UBE2D4-201ENST00000222402 IGKV1-17P01599 117 aa11.87□□□□□ -0.51
UBE2D4-201ENST00000222402 CLEC3BP05452 202 aa11.87□□□□□ -0.51
UBE2D4-201ENST00000222402 BMI1P35226 326 aa11.87□□□□□ -0.51
UBE2D4-201ENST00000222402 KIR2DL5AQ8N109 375 aa11.87□□□□□ -0.51
UBE2D4-201ENST00000222402 PTTG1IPP53801 180 aa11.87□□□□□ -0.51
UBE2D4-201ENST00000222402 FAM208BQ5VWN6 2430 aa11.87□□□□□ -0.51
UBE2D4-201ENST00000222402 TRBV19A0A075B6N1 114 aa11.87□□□□□ -0.51
UBE2D4-201ENST00000222402 TRAV9-2A0A087WT02 112 aa11.87□□□□□ -0.51
UBE2D4-201ENST00000222402 RAI1Q7Z5J4 1906 aaPredicted RBP11.87□□□□□ -0.51
UBE2D4-201ENST00000222402 ZNF292O60281 2723 aa11.87□□□□□ -0.51
UBE2D4-201ENST00000222402 TEX22C9J3V5 150 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 337.9 ms