RNA–Protein interactions for RNA: ENST00000219334.9

SMPD3-201, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPD3, Length 5,453 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-201ENST00000219334 TMEM170AQ8WVE7 144 aa15.4■□□□□ 0.06
SMPD3-201ENST00000219334 GNB1LQ9BYB4 327 aa15.4■□□□□ 0.06
SMPD3-201ENST00000219334 LINC01619G3V211 115 aa15.4■□□□□ 0.06
SMPD3-201ENST00000219334 CEACAM8P31997 349 aaPredicted RBP15.4■□□□□ 0.06
SMPD3-201ENST00000219334 NMSQ5H8A3 153 aa15.4■□□□□ 0.06
SMPD3-201ENST00000219334 J3QLI3 93 aa15.4■□□□□ 0.06
SMPD3-201ENST00000219334 SEC11AP67812 179 aa15.4■□□□□ 0.06
SMPD3-201ENST00000219334 Q71RC1 249 aaPredicted RBP15.4■□□□□ 0.06
SMPD3-201ENST00000219334 LYPD1Q8N2G4 141 aa15.4■□□□□ 0.06
SMPD3-201ENST00000219334 NYNRINQ9P2P1 1898 aaKnown RBP15.4■□□□□ 0.06
SMPD3-201ENST00000219334 SUPT4H1P63272 117 aaKnown RBP15.39■□□□□ 0.05
SMPD3-201ENST00000219334 TMEM14EPQ6UXP3 125 aa15.39■□□□□ 0.05
SMPD3-201ENST00000219334 IFI27L1Q96BM0 104 aa15.39■□□□□ 0.05
SMPD3-201ENST00000219334 DOCK7Q96N67 2140 aa15.39■□□□□ 0.05
SMPD3-201ENST00000219334 A8MXK9 166 aa15.39■□□□□ 0.05
SMPD3-201ENST00000219334 TYMSP04818 313 aa15.39■□□□□ 0.05
SMPD3-201ENST00000219334 CD300EQ496F6 205 aaPredicted RBP15.39■□□□□ 0.05
SMPD3-201ENST00000219334 IGKCP01834 107 aa15.39■□□□□ 0.05
SMPD3-201ENST00000219334 Q8TAT8 98 aa15.39■□□□□ 0.05
SMPD3-201ENST00000219334 IGHV3-64A0A075B6Q5 118 aa15.39■□□□□ 0.05
SMPD3-201ENST00000219334 IGHV2-70DA0A0C4DH43 119 aa15.38■□□□□ 0.05
SMPD3-201ENST00000219334 LYZL1Q6UWQ5 148 aa15.38■□□□□ 0.05
SMPD3-201ENST00000219334 CHCHD1Q96BP2 118 aaKnown RBP15.38■□□□□ 0.05
SMPD3-201ENST00000219334 AGMATQ9BSE5 352 aa15.38■□□□□ 0.05
SMPD3-201ENST00000219334 E9PQ18 207 aa15.38■□□□□ 0.05
SMPD3-201ENST00000219334 VCYO14598 125 aa15.38■□□□□ 0.05
SMPD3-201ENST00000219334 TEX43Q6ZNM6 134 aa15.38■□□□□ 0.05
SMPD3-201ENST00000219334 ATP6V0E1O15342 81 aa15.38■□□□□ 0.05
SMPD3-201ENST00000219334 PRSS33Q8NF86 280 aa15.38■□□□□ 0.05
SMPD3-201ENST00000219334 PSG3Q16557 428 aa15.37■□□□□ 0.05
SMPD3-201ENST00000219334 C1QL4Q86Z23 238 aa15.37■□□□□ 0.05
SMPD3-201ENST00000219334 FAM110DQ8TAY7 271 aaPredicted RBP15.37■□□□□ 0.05
SMPD3-201ENST00000219334 SBF1O95248 1867 aa15.37■□□□□ 0.05
SMPD3-201ENST00000219334 C1orf159Q96HA4 380 aa15.37■□□□□ 0.05
SMPD3-201ENST00000219334 LY6G6EA0A0G2JKS1 128 aa15.37■□□□□ 0.05
SMPD3-201ENST00000219334 ITGB1BP1O14713 200 aa15.37■□□□□ 0.05
SMPD3-201ENST00000219334 AMBPP02760 352 aa15.37■□□□□ 0.05
SMPD3-201ENST00000219334 LINC01559Q495D7 138 aa15.37■□□□□ 0.05
SMPD3-201ENST00000219334 IGFL4Q6B9Z1 124 aa15.37■□□□□ 0.05
SMPD3-201ENST00000219334 U3KQA8 63 aa15.37■□□□□ 0.05
SMPD3-201ENST00000219334 SH2D1AO60880 128 aa15.37■□□□□ 0.05
SMPD3-201ENST00000219334 ERCC8Q13216 396 aa15.37■□□□□ 0.05
SMPD3-201ENST00000219334 NIT1Q86X76 327 aa15.37■□□□□ 0.05
SMPD3-201ENST00000219334 Q8TCH9 128 aa15.37■□□□□ 0.05
SMPD3-201ENST00000219334 MCRIP2Q9BUT9 160 aaKnown RBP15.37■□□□□ 0.05
SMPD3-201ENST00000219334 RNASE2P10153 161 aaKnown RBP15.36■□□□□ 0.05
SMPD3-201ENST00000219334 C6orf226Q5I0X4 101 aa15.36■□□□□ 0.05
SMPD3-201ENST00000219334 NCR2O95944 276 aa15.36■□□□□ 0.05
SMPD3-201ENST00000219334 IGKV1-16P04430 117 aa15.36■□□□□ 0.05
SMPD3-201ENST00000219334 RASL10AQ92737 203 aa15.36■□□□□ 0.05
SMPD3-201ENST00000219334 SPCS1Q9Y6A9 102 aa15.36■□□□□ 0.05
SMPD3-201ENST00000219334 C5orf24Q7Z6I8 188 aa15.36■□□□□ 0.05
SMPD3-201ENST00000219334 SMPXQ9UHP9 88 aa15.36■□□□□ 0.05
SMPD3-201ENST00000219334 GGTLC3B5MD39 225 aa15.36■□□□□ 0.05
SMPD3-201ENST00000219334 PAX4O43316 350 aa15.36■□□□□ 0.05
SMPD3-201ENST00000219334 FOXL1Q12952 345 aa15.36■□□□□ 0.05
SMPD3-201ENST00000219334 Q6ZS49 121 aa15.36■□□□□ 0.05
SMPD3-201ENST00000219334 CFHR2P36980 270 aa15.35■□□□□ 0.05
SMPD3-201ENST00000219334 GATA4P43694 442 aa15.35■□□□□ 0.05
SMPD3-201ENST00000219334 FER1L5A0AVI2 2057 aa15.35■□□□□ 0.05
SMPD3-201ENST00000219334 WNK2Q9Y3S1 2297 aa15.35■□□□□ 0.05
SMPD3-201ENST00000219334 IGHV4-39P01824 125 aa15.35■□□□□ 0.05
SMPD3-201ENST00000219334 NTF4P34130 210 aa15.35■□□□□ 0.05
SMPD3-201ENST00000219334 SLC25A2Q9BXI2 301 aa15.35■□□□□ 0.05
SMPD3-201ENST00000219334 NHP2Q9NX24 153 aaKnown RBP15.35■□□□□ 0.05
SMPD3-201ENST00000219334 LSM4Q9Y4Z0 139 aaKnown RBP15.35■□□□□ 0.05
SMPD3-201ENST00000219334 LINC00205P59089 165 aa15.35■□□□□ 0.05
SMPD3-201ENST00000219334 TMEM95Q3KNT9 176 aa15.34■□□□□ 0.05
SMPD3-201ENST00000219334 C14orf178Q8N769 122 aaPredicted RBP15.34■□□□□ 0.05
SMPD3-201ENST00000219334 D6R8Y8 96 aa15.34■□□□□ 0.05
SMPD3-201ENST00000219334 DAD1P61803 113 aa15.34■□□□□ 0.05
SMPD3-201ENST00000219334 OR2K2Q8NGT1 345 aa15.34■□□□□ 0.05
SMPD3-201ENST00000219334 C5orf30Q96GV9 206 aa15.34■□□□□ 0.05
SMPD3-201ENST00000219334 XCL2Q9UBD3 114 aa15.34■□□□□ 0.05
SMPD3-201ENST00000219334 NOTCH3Q9UM47 2321 aa15.34■□□□□ 0.05
SMPD3-201ENST00000219334 SS18Q15532 418 aa15.33■□□□□ 0.05
SMPD3-201ENST00000219334 RPP25LQ8N5L8 163 aaKnown RBP15.33■□□□□ 0.05
SMPD3-201ENST00000219334 F5H768 121 aa15.33■□□□□ 0.04
SMPD3-201ENST00000219334 CREBBPQ92793 2442 aa15.33■□□□□ 0.04
SMPD3-201ENST00000219334 SFTA2Q6UW10 78 aa15.33■□□□□ 0.04
SMPD3-201ENST00000219334 RNF144BQ7Z419 303 aa15.33■□□□□ 0.04
SMPD3-201ENST00000219334 REG4Q9BYZ8 158 aa15.33■□□□□ 0.04
SMPD3-201ENST00000219334 FGF16O43320 207 aa15.33■□□□□ 0.04
SMPD3-201ENST00000219334 PIP4P1Q86T03 277 aa15.33■□□□□ 0.04
SMPD3-201ENST00000219334 PLEKHB2Q96CS7 222 aa15.33■□□□□ 0.04
SMPD3-201ENST00000219334 TRAV1-1A0A0B4J248 108 aa15.32■□□□□ 0.04
SMPD3-201ENST00000219334 A0A1W2PPI3 338 aa15.32■□□□□ 0.04
SMPD3-201ENST00000219334 TMEM238C9JI98 176 aa15.32■□□□□ 0.04
SMPD3-201ENST00000219334 SHANK2-AS3Q9BTD1 123 aa15.32■□□□□ 0.04
SMPD3-201ENST00000219334 ARFGEF3Q5TH69 2177 aa15.32■□□□□ 0.04
SMPD3-201ENST00000219334 CDK2AP2O75956 126 aa15.32■□□□□ 0.04
SMPD3-201ENST00000219334 DEFB104AQ8WTQ1 72 aa15.32■□□□□ 0.04
SMPD3-201ENST00000219334 THSD7BQ9C0I4 1608 aa15.32■□□□□ 0.04
SMPD3-201ENST00000219334 HOXA3O43365 443 aaPredicted RBP15.31■□□□□ 0.04
SMPD3-201ENST00000219334 MST1LQ2TV78 715 aa15.31■□□□□ 0.04
SMPD3-201ENST00000219334 C15orf62A8K5M9 175 aa15.31■□□□□ 0.04
SMPD3-201ENST00000219334 FAM90A2PQ658T7 463 aa15.31■□□□□ 0.04
SMPD3-201ENST00000219334 TRAV9-2A0A087WT02 112 aa15.31■□□□□ 0.04
SMPD3-201ENST00000219334 FNDC10F2Z333 226 aa15.31■□□□□ 0.04
SMPD3-201ENST00000219334 M0R2P5 195 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms