RNA–Protein interactions for RNA: ENST00000219302.7

NME3-201, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NME3, Length 1,069 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-201ENST00000219302 ATG101Q9BSB4 218 aa11.04□□□□□ -0.64
NME3-201ENST00000219302 DUXBA0A1W2PPF3 345 aa11.03□□□□□ -0.64
NME3-201ENST00000219302 DEFB130BP0DP73 79 aa11.03□□□□□ -0.64
NME3-201ENST00000219302 DEFB130AP0DP74 79 aa11.03□□□□□ -0.64
NME3-201ENST00000219302 SLC25A6P12236 298 aa11.03□□□□□ -0.64
NME3-201ENST00000219302 B2MP61769 119 aa11.03□□□□□ -0.64
NME3-201ENST00000219302 GPR141Q7Z602 305 aa11.03□□□□□ -0.64
NME3-201ENST00000219302 LRTM2Q8N967 370 aa11.03□□□□□ -0.64
NME3-201ENST00000219302 APOBP04114 4563 aaKnown RBP11.02□□□□□ -0.64
NME3-201ENST00000219302 INSP01308 110 aa11.02□□□□□ -0.65
NME3-201ENST00000219302 ORM2P19652 201 aa11.02□□□□□ -0.65
NME3-201ENST00000219302 RNF182Q8N6D2 247 aa11.02□□□□□ -0.65
NME3-201ENST00000219302 GPR82Q96P67 336 aa11.02□□□□□ -0.65
NME3-201ENST00000219302 MCUBQ9NWR8 336 aa11.02□□□□□ -0.65
NME3-201ENST00000219302 PAIP2BQ9ULR5 123 aaKnown RBP11.02□□□□□ -0.65
NME3-201ENST00000219302 LINC00588Q9Y4M8 146 aa11.02□□□□□ -0.65
NME3-201ENST00000219302 PIGBOS1A0A0B4J2F0 54 aa11.01□□□□□ -0.65
NME3-201ENST00000219302 CBY3A6NI87 242 aa11.01□□□□□ -0.65
NME3-201ENST00000219302 F5H768 121 aa11.01□□□□□ -0.65
NME3-201ENST00000219302 TMEM128Q5BJH2 165 aa11.01□□□□□ -0.65
NME3-201ENST00000219302 BAP18Q8IXM2 172 aa11.01□□□□□ -0.65
NME3-201ENST00000219302 BPIFCQ8NFQ6 507 aa11.01□□□□□ -0.65
NME3-201ENST00000219302 DYNC2LI1Q8TCX1 351 aa11.01□□□□□ -0.65
NME3-201ENST00000219302 RSL24D1Q9UHA3 163 aaKnown RBP11.01□□□□□ -0.65
NME3-201ENST00000219302 DNAH5Q8TE73 4624 aa11.01□□□□□ -0.65
NME3-201ENST00000219302 TRAV12-2A0A075B6T6 113 aa11□□□□□ -0.65
NME3-201ENST00000219302 SYNGR2O43760 224 aa11□□□□□ -0.65
NME3-201ENST00000219302 MED6O75586 246 aa11□□□□□ -0.65
NME3-201ENST00000219302 NUDT3O95989 172 aa11□□□□□ -0.65
NME3-201ENST00000219302 ATP5G1P05496 136 aa11□□□□□ -0.65
NME3-201ENST00000219302 ATP5G3P48201 142 aa11□□□□□ -0.65
NME3-201ENST00000219302 CCL18P55774 89 aa11□□□□□ -0.65
NME3-201ENST00000219302 MAPKAPK5-AS1Q8N8E1 139 aa11□□□□□ -0.65
NME3-201ENST00000219302 CIB3Q96Q77 187 aaPredicted RBP11□□□□□ -0.65
NME3-201ENST00000219302 TMEM147Q9BVK8 224 aa11□□□□□ -0.65
NME3-201ENST00000219302 SLC25A39Q9BZJ4 359 aaPredicted RBP11□□□□□ -0.65
NME3-201ENST00000219302 H3BRN7 92 aa10.99□□□□□ -0.65
NME3-201ENST00000219302 WRBO00258 174 aa10.99□□□□□ -0.65
NME3-201ENST00000219302 RPP30P78346 268 aaKnown RBP10.99□□□□□ -0.65
NME3-201ENST00000219302 RNF141Q8WVD5 230 aa10.99□□□□□ -0.65
NME3-201ENST00000219302 SHANK2-AS3Q9BTD1 123 aa10.99□□□□□ -0.65
NME3-201ENST00000219302 CCDC59Q9P031 241 aaKnown RBP10.99□□□□□ -0.65
NME3-201ENST00000219302 BOLA2-SMG1P6H3BVE0 249 aa10.98□□□□□ -0.65
NME3-201ENST00000219302 CXCL3P19876 107 aa10.98□□□□□ -0.65
NME3-201ENST00000219302 S100A7P31151 101 aa10.98□□□□□ -0.65
NME3-201ENST00000219302 TNFSF8P32971 234 aa10.98□□□□□ -0.65
NME3-201ENST00000219302 TAS2R60P59551 318 aa10.98□□□□□ -0.65
NME3-201ENST00000219302 FGL1Q08830 312 aa10.98□□□□□ -0.65
NME3-201ENST00000219302 TMEM144Q7Z5S9 345 aa10.98□□□□□ -0.65
NME3-201ENST00000219302 TMED4Q7Z7H5 227 aa10.98□□□□□ -0.65
NME3-201ENST00000219302 TMEM256Q8N2U0 113 aa10.98□□□□□ -0.65
NME3-201ENST00000219302 ZNF738Q8NE65 137 aa10.98□□□□□ -0.65
NME3-201ENST00000219302 OR8A1Q8NGG7 326 aa10.98□□□□□ -0.65
NME3-201ENST00000219302 LINC01587Q99440 93 aa10.98□□□□□ -0.65
NME3-201ENST00000219302 FABP12A6NFH5 140 aa10.97□□□□□ -0.65
NME3-201ENST00000219302 PLP1P60201 277 aa10.97□□□□□ -0.65
NME3-201ENST00000219302 SPANXN5Q5MJ07 72 aa10.97□□□□□ -0.65
NME3-201ENST00000219302 ACOT7LQ6ZUV0 252 aa10.97□□□□□ -0.65
NME3-201ENST00000219302 Q8N1X5 172 aa10.97□□□□□ -0.65
NME3-201ENST00000219302 SLIRPQ9GZT3 109 aaKnown RBP10.97□□□□□ -0.65
NME3-201ENST00000219302 SFT2D2O95562 160 aa10.96□□□□□ -0.65
NME3-201ENST00000219302 RPL7P18124 248 aaKnown RBP10.96□□□□□ -0.65
NME3-201ENST00000219302 VAMP1P23763 118 aa10.96□□□□□ -0.65
NME3-201ENST00000219302 HIST1H1AQ02539 215 aaPredicted RBP10.96□□□□□ -0.65
NME3-201ENST00000219302 AKR1C1Q04828 323 aa10.96□□□□□ -0.65
NME3-201ENST00000219302 PSG3Q16557 428 aa10.96□□□□□ -0.65
NME3-201ENST00000219302 CYP2G1PQ6ZSU1 146 aa10.96□□□□□ -0.65
NME3-201ENST00000219302 SSX7Q7RTT5 188 aa10.96□□□□□ -0.65
NME3-201ENST00000219302 MRPS26Q9BYN8 205 aaKnown RBP10.96□□□□□ -0.65
NME3-201ENST00000219302 Q9H8V8 135 aa10.96□□□□□ -0.65
NME3-201ENST00000219302 TIMM8BQ9Y5J9 83 aaPredicted RBP10.96□□□□□ -0.65
NME3-201ENST00000219302 A0A087X0K7 114 aa10.95□□□□□ -0.66
NME3-201ENST00000219302 PMS2P5A8MQ11 134 aa10.95□□□□□ -0.66
NME3-201ENST00000219302 H3BP45 60 aa10.95□□□□□ -0.66
NME3-201ENST00000219302 MRPS12O15235 138 aaKnown RBP10.95□□□□□ -0.66
NME3-201ENST00000219302 HYPMO75409 117 aa10.95□□□□□ -0.66
NME3-201ENST00000219302 IL5P05113 134 aa10.95□□□□□ -0.66
NME3-201ENST00000219302 HOXB5P09067 269 aa10.95□□□□□ -0.66
NME3-201ENST00000219302 RHOBP62745 196 aa10.95□□□□□ -0.66
NME3-201ENST00000219302 ID3Q02535 119 aa10.95□□□□□ -0.66
NME3-201ENST00000219302 PPP1R1AQ13522 171 aa10.95□□□□□ -0.66
NME3-201ENST00000219302 RNASE8Q8TDE3 154 aaKnown RBP10.95□□□□□ -0.66
NME3-201ENST00000219302 RAB2BQ8WUD1 216 aa10.95□□□□□ -0.66
NME3-201ENST00000219302 TRIM63Q969Q1 353 aa10.95□□□□□ -0.66
NME3-201ENST00000219302 C16orf74Q96GX8 76 aa10.95□□□□□ -0.66
NME3-201ENST00000219302 KRTAP1-5Q9BYS1 174 aa10.95□□□□□ -0.66
NME3-201ENST00000219302 HIGD1AQ9Y241 93 aa10.95□□□□□ -0.66
NME3-201ENST00000219302 STRAPQ9Y3F4 350 aaKnown RBP10.95□□□□□ -0.66
NME3-201ENST00000219302 HTN1P15515 57 aa10.94□□□□□ -0.66
NME3-201ENST00000219302 FAUP35544 74 aaKnown RBP10.94□□□□□ -0.66
NME3-201ENST00000219302 TMBIM6P55061 237 aa10.94□□□□□ -0.66
NME3-201ENST00000219302 RAP2BP61225 183 aa10.94□□□□□ -0.66
NME3-201ENST00000219302 PATE2Q6UY27 113 aa10.94□□□□□ -0.66
NME3-201ENST00000219302 ZNF493Q6ZR52 646 aa10.94□□□□□ -0.66
NME3-201ENST00000219302 SPATA12Q7Z6I5 190 aa10.94□□□□□ -0.66
NME3-201ENST00000219302 LINC00612Q8N6U2 182 aa10.94□□□□□ -0.66
NME3-201ENST00000219302 UHRF2Q96PU4 802 aa10.94□□□□□ -0.66
NME3-201ENST00000219302 BCL7BQ9BQE9 202 aa10.94□□□□□ -0.66
NME3-201ENST00000219302 SLC25A21Q9BQT8 299 aaPredicted RBP10.94□□□□□ -0.66
NME3-201ENST00000219302 NOP10Q9NPE3 64 aaKnown RBP10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 108.4 ms