RNA–Protein interactions for RNA: ENST00000216492.9

CHGA-201, Transcript of chromogranin A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHGA, Length 2,063 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHGA-201ENST00000216492 LINC00479Q96M42 142 aa13.4□□□□□ -0.26
CHGA-201ENST00000216492 NDUFAF3Q9BU61 184 aa13.4□□□□□ -0.26
CHGA-201ENST00000216492 SAMD10Q9BYL1 202 aa13.4□□□□□ -0.26
CHGA-201ENST00000216492 NCBP2LA6PVI3 153 aaKnown RBP13.4□□□□□ -0.27
CHGA-201ENST00000216492 OR10J3Q5JRS4 329 aa13.4□□□□□ -0.27
CHGA-201ENST00000216492 RASL11AQ6T310 242 aa13.4□□□□□ -0.27
CHGA-201ENST00000216492 PRSS57Q6UWY2 283 aa13.4□□□□□ -0.27
CHGA-201ENST00000216492 BRD3OSQ6XYD6 125 aa13.4□□□□□ -0.27
CHGA-201ENST00000216492 ZNF331Q9NQX6 463 aaPredicted RBP13.4□□□□□ -0.27
CHGA-201ENST00000216492 CNIH1O95406 144 aa13.39□□□□□ -0.27
CHGA-201ENST00000216492 FRMD6-AS1P0C7T7 363 aa13.39□□□□□ -0.27
CHGA-201ENST00000216492 TMEM11P17152 192 aa13.39□□□□□ -0.27
CHGA-201ENST00000216492 MYCNOSP40205 109 aa13.39□□□□□ -0.27
CHGA-201ENST00000216492 USF2Q15853 346 aaPredicted RBP13.39□□□□□ -0.27
CHGA-201ENST00000216492 FAM120AOSQ5T036 256 aa13.39□□□□□ -0.27
CHGA-201ENST00000216492 Q8N6K4 173 aa13.39□□□□□ -0.27
CHGA-201ENST00000216492 GRAMD2BQ96HH9 432 aa13.39□□□□□ -0.27
CHGA-201ENST00000216492 EPDR1Q9UM22 224 aa13.39□□□□□ -0.27
CHGA-201ENST00000216492 TGFAP01135 160 aa13.38□□□□□ -0.27
CHGA-201ENST00000216492 SLC25A5P05141 298 aaKnown RBP13.38□□□□□ -0.27
CHGA-201ENST00000216492 IGHV4-38-2P0DP08 117 aa13.38□□□□□ -0.27
CHGA-201ENST00000216492 HIST1H1EP10412 219 aaKnown RBP13.38□□□□□ -0.27
CHGA-201ENST00000216492 RAB4AP20338 218 aa13.38□□□□□ -0.27
CHGA-201ENST00000216492 LINC00310P59036 64 aa13.38□□□□□ -0.27
CHGA-201ENST00000216492 PLP1P60201 277 aa13.38□□□□□ -0.27
CHGA-201ENST00000216492 SLC35B1P78383 322 aa13.38□□□□□ -0.27
CHGA-201ENST00000216492 C5orf64Q2M2E5 130 aa13.38□□□□□ -0.27
CHGA-201ENST00000216492 MRPL54Q6P161 138 aaKnown RBP13.38□□□□□ -0.27
CHGA-201ENST00000216492 BLNKQ8WV28 456 aa13.38□□□□□ -0.27
CHGA-201ENST00000216492 SRSF8Q9BRL6 282 aaKnown RBP13.38□□□□□ -0.27
CHGA-201ENST00000216492 APCP25054 2843 aa13.38□□□□□ -0.27
CHGA-201ENST00000216492 CSMD1Q96PZ7 3565 aa13.38□□□□□ -0.27
CHGA-201ENST00000216492 ZNF705FA8MVS1 300 aaPredicted RBP13.38□□□□□ -0.27
CHGA-201ENST00000216492 TEX22C9J3V5 150 aa13.38□□□□□ -0.27
CHGA-201ENST00000216492 ZNF705DP0CH99 300 aaPredicted RBP13.38□□□□□ -0.27
CHGA-201ENST00000216492 ZNF705BP0CI00 300 aaPredicted RBP13.38□□□□□ -0.27
CHGA-201ENST00000216492 APELAP0DMC3 54 aa13.38□□□□□ -0.27
CHGA-201ENST00000216492 Q96MF0 132 aa13.38□□□□□ -0.27
CHGA-201ENST00000216492 TRAV34A0A0B4J273 112 aa13.37□□□□□ -0.27
CHGA-201ENST00000216492 AVPP01185 164 aa13.37□□□□□ -0.27
CHGA-201ENST00000216492 NBEAP1P0C6P0 100 aa13.37□□□□□ -0.27
CHGA-201ENST00000216492 SIGLECL1Q8N7X8 197 aa13.37□□□□□ -0.27
CHGA-201ENST00000216492 WIPF2Q8TF74 440 aaPredicted RBP13.37□□□□□ -0.27
CHGA-201ENST00000216492 SRSF12Q8WXF0 261 aaKnown RBP13.37□□□□□ -0.27
CHGA-201ENST00000216492 HSPB9Q9BQS6 159 aa13.37□□□□□ -0.27
CHGA-201ENST00000216492 GNB4Q9HAV0 340 aa13.37□□□□□ -0.27
CHGA-201ENST00000216492 PLXNB1O43157 2135 aa13.37□□□□□ -0.27
CHGA-201ENST00000216492 PGPA6NDG6 321 aa13.36□□□□□ -0.27
CHGA-201ENST00000216492 APCSP02743 223 aa13.36□□□□□ -0.27
CHGA-201ENST00000216492 C1orf194Q5T5A4 169 aa13.36□□□□□ -0.27
CHGA-201ENST00000216492 Q6ZWC4 215 aa13.36□□□□□ -0.27
CHGA-201ENST00000216492 C1RLQ9NZP8 487 aa13.36□□□□□ -0.27
CHGA-201ENST00000216492 HIGD1AQ9Y241 93 aa13.36□□□□□ -0.27
CHGA-201ENST00000216492 NAV3Q8IVL0 2385 aa13.36□□□□□ -0.27
CHGA-201ENST00000216492 CA1P00915 261 aaPredicted RBP13.36□□□□□ -0.27
CHGA-201ENST00000216492 NUTF2P61970 127 aaKnown RBP13.36□□□□□ -0.27
CHGA-201ENST00000216492 GNG5P63218 68 aa13.36□□□□□ -0.27
CHGA-201ENST00000216492 C5orf17Q8NAS9 161 aa13.36□□□□□ -0.27
CHGA-201ENST00000216492 ATG101Q9BSB4 218 aa13.36□□□□□ -0.27
CHGA-201ENST00000216492 IGHV3-21A0A0B4J1V1 117 aa13.35□□□□□ -0.27
CHGA-201ENST00000216492 GP9P14770 177 aa13.35□□□□□ -0.27
CHGA-201ENST00000216492 PRR27Q6MZM9 219 aa13.35□□□□□ -0.27
CHGA-201ENST00000216492 TOMM20LQ6UXN7 152 aa13.35□□□□□ -0.27
CHGA-201ENST00000216492 ZNF562Q6V9R5 426 aa13.35□□□□□ -0.27
CHGA-201ENST00000216492 C19orf35Q6ZS72 473 aa13.35□□□□□ -0.27
CHGA-201ENST00000216492 NUDT10Q8NFP7 164 aa13.35□□□□□ -0.27
CHGA-201ENST00000216492 NUDT11Q96G61 164 aa13.35□□□□□ -0.27
CHGA-201ENST00000216492 FMC1Q96HJ9 113 aa13.35□□□□□ -0.27
CHGA-201ENST00000216492 GPR82Q96P67 336 aa13.35□□□□□ -0.27
CHGA-201ENST00000216492 MEGF9Q9H1U4 602 aa13.35□□□□□ -0.27
CHGA-201ENST00000216492 CBY1Q9Y3M2 126 aa13.35□□□□□ -0.27
CHGA-201ENST00000216492 KLF12Q9Y4X4 402 aa13.35□□□□□ -0.27
CHGA-201ENST00000216492 KIR2DL5BA0A0G2JN68 375 aa13.35□□□□□ -0.27
CHGA-201ENST00000216492 KIR2DL5BA0A0G2JPC4 375 aa13.35□□□□□ -0.27
CHGA-201ENST00000216492 KLF17Q5JT82 389 aaPredicted RBP13.35□□□□□ -0.27
CHGA-201ENST00000216492 KRTAP1-3Q8IUG1 177 aa13.35□□□□□ -0.27
CHGA-201ENST00000216492 KIR2DL5AQ8N109 375 aa13.35□□□□□ -0.27
CHGA-201ENST00000216492 TSKUQ8WUA8 353 aa13.35□□□□□ -0.27
CHGA-201ENST00000216492 KCNS1Q96KK3 526 aa13.35□□□□□ -0.27
CHGA-201ENST00000216492 ZNF586Q9NXT0 402 aa13.35□□□□□ -0.27
CHGA-201ENST00000216492 F2Z2F3 143 aa13.34□□□□□ -0.27
CHGA-201ENST00000216492 BMPR1BO00238 502 aa13.34□□□□□ -0.27
CHGA-201ENST00000216492 ZNF253O75346 499 aa13.34□□□□□ -0.27
CHGA-201ENST00000216492 IGHV4-31P0DP07 118 aa13.34□□□□□ -0.27
CHGA-201ENST00000216492 SRIP30626 198 aa13.34□□□□□ -0.27
CHGA-201ENST00000216492 KIAA1644Q3SXP7 199 aa13.34□□□□□ -0.27
CHGA-201ENST00000216492 TMEM190Q8WZ59 177 aa13.34□□□□□ -0.27
CHGA-201ENST00000216492 RASL11BQ9BPW5 248 aa13.34□□□□□ -0.27
CHGA-201ENST00000216492 J3QLI3 93 aa13.33□□□□□ -0.27
CHGA-201ENST00000216492 SNRPCP09234 159 aaKnown RBP13.33□□□□□ -0.27
CHGA-201ENST00000216492 IGLC1P0CG04 106 aa13.33□□□□□ -0.27
CHGA-201ENST00000216492 LYZP61626 148 aa13.33□□□□□ -0.27
CHGA-201ENST00000216492 ARL6IP6Q8N6S5 226 aa13.33□□□□□ -0.27
CHGA-201ENST00000216492 Q8N9W7 124 aa13.33□□□□□ -0.27
CHGA-201ENST00000216492 RPH3ALQ9UNE2 315 aa13.33□□□□□ -0.27
CHGA-201ENST00000216492 I3L2K1 104 aa13.33□□□□□ -0.28
CHGA-201ENST00000216492 TOMM40O96008 361 aa13.33□□□□□ -0.28
CHGA-201ENST00000216492 GPX1P07203 203 aa13.33□□□□□ -0.28
CHGA-201ENST00000216492 PSG1P11464 419 aa13.33□□□□□ -0.28
CHGA-201ENST00000216492 NUP35Q8NFH5 326 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 108.6 ms