RNA–Protein interactions for RNA: ENST00000075430.11

CTDP1-201, Transcript of CTD phosphatase subunit 1, humanhuman

TSL 1 (best) BASIC

Gene CTDP1, Length 3,538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1-201ENST00000075430 CACNG7P62955 275 aa13.43□□□□□ -0.26
CTDP1-201ENST00000075430 ZNF474Q6S9Z5 364 aaPredicted RBP13.43□□□□□ -0.26
CTDP1-201ENST00000075430 RBPMS2Q6ZRY4 209 aaKnown RBP13.43□□□□□ -0.26
CTDP1-201ENST00000075430 PNKDQ8N490 385 aa13.43□□□□□ -0.26
CTDP1-201ENST00000075430 TMEM213A2RRL7 107 aa13.43□□□□□ -0.26
CTDP1-201ENST00000075430 TOMM40O96008 361 aa13.43□□□□□ -0.26
CTDP1-201ENST00000075430 ZNF714Q96N38 554 aa13.43□□□□□ -0.26
CTDP1-201ENST00000075430 FBXL15Q9H469 300 aa13.43□□□□□ -0.26
CTDP1-201ENST00000075430 NDUFA4L2Q9NRX3 87 aa13.43□□□□□ -0.26
CTDP1-201ENST00000075430 TCRAP04437 139 aa13.42□□□□□ -0.26
CTDP1-201ENST00000075430 NCOR2Q9Y618 2525 aa13.42□□□□□ -0.26
CTDP1-201ENST00000075430 FCER1GP30273 86 aa13.42□□□□□ -0.26
CTDP1-201ENST00000075430 S100A7AQ86SG5 101 aa13.42□□□□□ -0.26
CTDP1-201ENST00000075430 SLC25A15Q9Y619 301 aa13.42□□□□□ -0.26
CTDP1-201ENST00000075430 IGKV1D-37A0A075B6S9 117 aa13.42□□□□□ -0.26
CTDP1-201ENST00000075430 LIPFP07098 398 aa13.42□□□□□ -0.26
CTDP1-201ENST00000075430 ANKRD39Q53RE8 183 aa13.42□□□□□ -0.26
CTDP1-201ENST00000075430 SLC25A48Q6ZT89 311 aaKnown RBP13.42□□□□□ -0.26
CTDP1-201ENST00000075430 OR4C13Q8NGP0 309 aa13.42□□□□□ -0.26
CTDP1-201ENST00000075430 ITGB1BP1O14713 200 aa13.41□□□□□ -0.26
CTDP1-201ENST00000075430 SMIM15Q7Z3B0 74 aa13.41□□□□□ -0.26
CTDP1-201ENST00000075430 IGHV3OR16-13A0A075B7E8 117 aa13.41□□□□□ -0.26
CTDP1-201ENST00000075430 IGHV3-74A0A0B4J1X5 117 aa13.41□□□□□ -0.26
CTDP1-201ENST00000075430 DEFB104AQ8WTQ1 72 aa13.41□□□□□ -0.26
CTDP1-201ENST00000075430 ST20Q9HBF5 79 aa13.41□□□□□ -0.26
CTDP1-201ENST00000075430 AARDQ4LEZ3 155 aa13.4□□□□□ -0.26
CTDP1-201ENST00000075430 TMEM200BQ69YZ2 307 aa13.4□□□□□ -0.26
CTDP1-201ENST00000075430 IGHG3P01860 377 aa13.4□□□□□ -0.26
CTDP1-201ENST00000075430 FAM120AOSQ5T036 256 aa13.4□□□□□ -0.26
CTDP1-201ENST00000075430 MBNL2Q5VZF2 373 aaKnown RBP13.4□□□□□ -0.26
CTDP1-201ENST00000075430 AMN1Q8IY45 258 aa13.4□□□□□ -0.26
CTDP1-201ENST00000075430 DKK4Q9UBT3 224 aa13.4□□□□□ -0.26
CTDP1-201ENST00000075430 GCSHP23434 173 aa13.4□□□□□ -0.26
CTDP1-201ENST00000075430 VMA21Q3ZAQ7 101 aa13.4□□□□□ -0.26
CTDP1-201ENST00000075430 COL12A1Q99715 3063 aa13.4□□□□□ -0.26
CTDP1-201ENST00000075430 K7ERU9 68 aa13.39□□□□□ -0.27
CTDP1-201ENST00000075430 FCGR2BP31994 310 aaPredicted RBP13.39□□□□□ -0.27
CTDP1-201ENST00000075430 C5orf17Q8NAS9 161 aa13.39□□□□□ -0.27
CTDP1-201ENST00000075430 HSPB8Q9UJY1 196 aa13.39□□□□□ -0.27
CTDP1-201ENST00000075430 D6R8Y8 96 aa13.39□□□□□ -0.27
CTDP1-201ENST00000075430 CGB3P0DN86 165 aa13.39□□□□□ -0.27
CTDP1-201ENST00000075430 CGB7P0DN87 165 aa13.39□□□□□ -0.27
CTDP1-201ENST00000075430 GLRXP35754 106 aa13.39□□□□□ -0.27
CTDP1-201ENST00000075430 RPL27AP46776 148 aaKnown RBP13.39□□□□□ -0.27
CTDP1-201ENST00000075430 C19orf24Q9BVV8 132 aa13.39□□□□□ -0.27
CTDP1-201ENST00000075430 RAB9BQ9NP90 201 aa13.39□□□□□ -0.27
CTDP1-201ENST00000075430 DYNLRB1Q9NP97 96 aa13.39□□□□□ -0.27
CTDP1-201ENST00000075430 PLSCR4Q9NRQ2 329 aa13.39□□□□□ -0.27
CTDP1-201ENST00000075430 TMEM97Q5BJF2 176 aa13.39□□□□□ -0.27
CTDP1-201ENST00000075430 CACNG8Q8WXS5 425 aa13.39□□□□□ -0.27
CTDP1-201ENST00000075430 HIGD1AQ9Y241 93 aa13.39□□□□□ -0.27
CTDP1-201ENST00000075430 PTPRQQ9UMZ3 2332 aa13.38□□□□□ -0.27
CTDP1-201ENST00000075430 A0A1B0GUT8 65 aa13.38□□□□□ -0.27
CTDP1-201ENST00000075430 CGB1A6NKQ9 187 aa13.38□□□□□ -0.27
CTDP1-201ENST00000075430 PCP2Q8IVA1 136 aa13.38□□□□□ -0.27
CTDP1-201ENST00000075430 C8orf49Q96NF6 230 aa13.38□□□□□ -0.27
CTDP1-201ENST00000075430 HES1Q14469 280 aa13.38□□□□□ -0.27
CTDP1-201ENST00000075430 TIMM23BQ5SRD1 257 aa13.38□□□□□ -0.27
CTDP1-201ENST00000075430 LCNL1Q6ZST4 164 aa13.38□□□□□ -0.27
CTDP1-201ENST00000075430 SEM1Q6ZVN7 128 aa13.38□□□□□ -0.27
CTDP1-201ENST00000075430 DEFB125Q8N687 156 aa13.38□□□□□ -0.27
CTDP1-201ENST00000075430 Q8TAT8 98 aa13.38□□□□□ -0.27
CTDP1-201ENST00000075430 OSR1Q8TAX0 266 aaPredicted RBP13.38□□□□□ -0.27
CTDP1-201ENST00000075430 RABAC1Q9UI14 185 aa13.38□□□□□ -0.27
CTDP1-201ENST00000075430 PSMB11A5LHX3 300 aa13.38□□□□□ -0.27
CTDP1-201ENST00000075430 CSN1S1P47710 185 aa13.38□□□□□ -0.27
CTDP1-201ENST00000075430 BCL6BQ8N143 479 aaPredicted RBP13.38□□□□□ -0.27
CTDP1-201ENST00000075430 SPTBN4Q9H254 2564 aa13.37□□□□□ -0.27
CTDP1-201ENST00000075430 CHD8Q9HCK8 2581 aa13.37□□□□□ -0.27
CTDP1-201ENST00000075430 TMEM75Q8N9X5 138 aa13.37□□□□□ -0.27
CTDP1-201ENST00000075430 PEF1Q9UBV8 284 aaKnown RBP13.37□□□□□ -0.27
CTDP1-201ENST00000075430 NDUFB3O43676 98 aa13.37□□□□□ -0.27
CTDP1-201ENST00000075430 EVI2AP22794 236 aa13.37□□□□□ -0.27
CTDP1-201ENST00000075430 SFTA2Q6UW10 78 aa13.37□□□□□ -0.27
CTDP1-201ENST00000075430 ZNF788Q6ZQV5 615 aa13.37□□□□□ -0.27
CTDP1-201ENST00000075430 ARL6IP6Q8N6S5 226 aa13.37□□□□□ -0.27
CTDP1-201ENST00000075430 RASL11BQ9BPW5 248 aa13.37□□□□□ -0.27
CTDP1-201ENST00000075430 KLF5Q13887 457 aaPredicted RBP13.36□□□□□ -0.27
CTDP1-201ENST00000075430 VSTM2AQ8TAG5 236 aa13.36□□□□□ -0.27
CTDP1-201ENST00000075430 J3KRW8 73 aa13.36□□□□□ -0.27
CTDP1-201ENST00000075430 CT45A10P0DMU9 189 aa13.36□□□□□ -0.27
CTDP1-201ENST00000075430 TMEM133Q9H2Q1 129 aa13.36□□□□□ -0.27
CTDP1-201ENST00000075430 SORL1Q92673 2214 aa13.36□□□□□ -0.27
CTDP1-201ENST00000075430 A0A1B0GXF2 115 aa13.36□□□□□ -0.27
CTDP1-201ENST00000075430 PRRG2O14669 202 aa13.36□□□□□ -0.27
CTDP1-201ENST00000075430 GNG7O60262 68 aa13.36□□□□□ -0.27
CTDP1-201ENST00000075430 OR2J3O76001 311 aa13.36□□□□□ -0.27
CTDP1-201ENST00000075430 FAM231DQ6ZW35 169 aa13.36□□□□□ -0.27
CTDP1-201ENST00000075430 K7ERJ3 54 aa13.35□□□□□ -0.27
CTDP1-201ENST00000075430 IL4P05112 153 aa13.35□□□□□ -0.27
CTDP1-201ENST00000075430 C1orf185Q5T7R7 199 aa13.35□□□□□ -0.27
CTDP1-201ENST00000075430 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.35□□□□□ -0.27
CTDP1-201ENST00000075430 NEU4Q8WWR8 484 aaPredicted RBP13.35□□□□□ -0.27
CTDP1-201ENST00000075430 SCRT2Q9NQ03 307 aa13.35□□□□□ -0.27
CTDP1-201ENST00000075430 C1RLQ9NZP8 487 aa13.35□□□□□ -0.27
CTDP1-201ENST00000075430 INSIG2Q9Y5U4 225 aa13.35□□□□□ -0.27
CTDP1-201ENST00000075430 IGLV1-44P01699 117 aa13.35□□□□□ -0.27
CTDP1-201ENST00000075430 HIST1H1AQ02539 215 aaPredicted RBP13.35□□□□□ -0.27
CTDP1-201ENST00000075430 GFRALQ6UXV0 394 aa13.35□□□□□ -0.27
CTDP1-201ENST00000075430 OR10AG1Q8NH19 301 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 123.8 ms