RNA–Protein interactions for RNA: YML040W

YML040W, Transcript of Retrotransposon TYA Gag gene co-transcribed with TYB Pol, yeastyeast

Gene YML040W, Length 1,323 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YML040WYML040W MET3P08536 511 aa5.17□□□□□ -1.58
YML040WYML040W MIS1P09440 975 aaKnown RBP5.17□□□□□ -1.58
YML040WYML040W HSC82P15108 705 aaKnown RBP5.17□□□□□ -1.58
YML040WYML040W CLB4P24871 460 aa5.17□□□□□ -1.58
YML040WYML040W TMN3P40071 706 aa5.17□□□□□ -1.58
YML040WYML040W PIG2P40187 538 aa5.17□□□□□ -1.58
YML040WYML040W RAD26P40352 1085 aa5.17□□□□□ -1.58
YML040WYML040W SMK1P41808 388 aa5.17□□□□□ -1.58
YML040WYML040W TIM50Q02776 476 aa5.17□□□□□ -1.58
YML040WYML040W ADY4Q05955 493 aa5.17□□□□□ -1.58
YML040WYML040W IRC13Q08630 104 aa5.17□□□□□ -1.58
YML040WYML040W YDR056CQ12025 205 aa5.17□□□□□ -1.58
YML040WYML040W YLR358CO13565 187 aa5.16□□□□□ -1.58
YML040WYML040W SNF1P06782 633 aaKnown RBP5.16□□□□□ -1.58
YML040WYML040W ADE3P07245 946 aaKnown RBP5.16□□□□□ -1.58
YML040WYML040W SEC15P22224 910 aa5.16□□□□□ -1.58
YML040WYML040W RPN12P32496 274 aa5.16□□□□□ -1.58
YML040WYML040W MAC1P35192 417 aa5.16□□□□□ -1.58
YML040WYML040W IFA38P38286 347 aa5.16□□□□□ -1.58
YML040WYML040W AXL2P38928 823 aa5.16□□□□□ -1.58
YML040WYML040W MNT3P40549 630 aa5.16□□□□□ -1.58
YML040WYML040W CTF18P49956 741 aa5.16□□□□□ -1.58
YML040WYML040W PRP43P53131 767 aaKnown RBP5.16□□□□□ -1.58
YML040WYML040W MDR1P53258 950 aa5.16□□□□□ -1.58
YML040WYML040W FHN1P53279 174 aa5.16□□□□□ -1.58
YML040WYML040W TRS31Q03337 283 aa5.16□□□□□ -1.58
YML040WYML040W VID22Q05934 901 aa5.16□□□□□ -1.58
YML040WYML040W CLF1Q12309 687 aaPredicted RBP5.16□□□□□ -1.58
YML040WYML040W NUC1P08466 329 aa5.15□□□□□ -1.59
YML040WYML040W VPS33P20795 691 aa5.15□□□□□ -1.59
YML040WYML040W RIT1P23796 513 aa5.15□□□□□ -1.59
YML040WYML040W GFD2P25370 566 aaKnown RBP5.15□□□□□ -1.59
YML040WYML040W RER1P25560 188 aa5.15□□□□□ -1.59
YML040WYML040W MVD1P32377 396 aaKnown RBP5.15□□□□□ -1.59
YML040WYML040W NPR3P38742 1146 aa5.15□□□□□ -1.59
YML040WYML040W PPE1P38796 400 aa5.15□□□□□ -1.59
YML040WYML040W YJL163CP46996 555 aa5.15□□□□□ -1.59
YML040WYML040W PAN2P53010 1115 aaPredicted RBP5.15□□□□□ -1.59
YML040WYML040W CLU1Q03690 1277 aaKnown RBP5.15□□□□□ -1.59
YML040WYML040W IZH3Q07959 543 aa5.15□□□□□ -1.59
YML040WYML040W ZRT2Q12436 422 aa5.15□□□□□ -1.59
YML040WYML040W ERG4P25340 473 aa5.14□□□□□ -1.59
YML040WYML040W IMP2'P32351 346 aa5.14□□□□□ -1.59
YML040WYML040W ARP2P32381 391 aaKnown RBP5.14□□□□□ -1.59
YML040WYML040W SET3P36124 751 aa5.14□□□□□ -1.59
YML040WYML040W BST1P43571 1029 aa5.14□□□□□ -1.59
YML040WYML040W MPS3P47069 682 aa5.14□□□□□ -1.59
YML040WYML040W YGR054WP53235 642 aaKnown RBP5.14□□□□□ -1.59
YML040WYML040W FRE5Q08908 694 aa5.14□□□□□ -1.59
YML040WYML040W TRM8Q12009 286 aa5.14□□□□□ -1.59
YML040WYML040W MLH3Q12083 715 aa5.14□□□□□ -1.59
YML040WYML040W RNQ1P25367 405 aa5.13□□□□□ -1.59
YML040WYML040W CHS3P29465 1165 aa5.13□□□□□ -1.59
YML040WYML040W EFT1P32324 842 aaKnown RBP5.13□□□□□ -1.59
YML040WYML040W ELM1P32801 640 aa5.13□□□□□ -1.59
YML040WYML040W FSH1P38777 243 aaKnown RBP5.13□□□□□ -1.59
YML040WYML040W YJL193WP39542 402 aa5.13□□□□□ -1.59
YML040WYML040W KHA1P40309 873 aa5.13□□□□□ -1.59
YML040WYML040W PSF2P40359 213 aa5.13□□□□□ -1.59
YML040WYML040W CAB2P40506 365 aa5.13□□□□□ -1.59
YML040WYML040W PHO23P50947 330 aa5.13□□□□□ -1.59
YML040WYML040W ICL2Q12031 575 aa5.13□□□□□ -1.59
YML040WYML040W YKL033W-AQ86ZR7 236 aa5.13□□□□□ -1.59
YML040WYML040W GUK1P15454 187 aaKnown RBP5.12□□□□□ -1.59
YML040WYML040W THR1P17423 357 aaKnown RBP5.12□□□□□ -1.59
YML040WYML040W BET2P20133 325 aa5.12□□□□□ -1.59
YML040WYML040W SLC1P33333 303 aa5.12□□□□□ -1.59
YML040WYML040W PHO11P35842 467 aa5.12□□□□□ -1.59
YML040WYML040W CTP1P38152 299 aa5.12□□□□□ -1.59
YML040WYML040W PHO12P38693 467 aa5.12□□□□□ -1.59
YML040WYML040W STB5P38699 743 aa5.12□□□□□ -1.59
YML040WYML040W FMP52P40008 231 aa5.12□□□□□ -1.59
YML040WYML040W KAP123P40069 1113 aaKnown RBP5.12□□□□□ -1.59
YML040WYML040W VFA1P40080 203 aa5.12□□□□□ -1.59
YML040WYML040W DPH1P40487 425 aaKnown RBP5.12□□□□□ -1.59
YML040WYML040W COS12P53053 380 aa5.12□□□□□ -1.59
YML040WYML040W CSR1Q06705 408 aaKnown RBP5.12□□□□□ -1.59
YML040WYML040W AIM6Q07716 390 aa5.12□□□□□ -1.59
YML040WYML040W LEU2P04173 364 aaPredicted RBP5.11□□□□□ -1.59
YML040WYML040W PCK1P10963 549 aa5.11□□□□□ -1.59
YML040WYML040W RPS7AP26786 190 aaKnown RBP5.11□□□□□ -1.59
YML040WYML040W CBF2P32504 956 aa5.11□□□□□ -1.59
YML040WYML040W DEF1P35732 738 aaKnown RBP5.11□□□□□ -1.59
YML040WYML040W MRPL7P36519 292 aa5.11□□□□□ -1.59
YML040WYML040W REV7P38927 245 aa5.11□□□□□ -1.59
YML040WYML040W MPT5P39016 859 aaKnown RBP RIP-Chip data5.11□□□□□ -1.59not detected
YML040WYML040W VPS64Q03944 604 aa5.11□□□□□ -1.59
YML040WYML040W MED1Q12321 566 aa5.11□□□□□ -1.59
YML040WYML040W SUL2Q12325 893 aa5.11□□□□□ -1.59
YML040WYML040W ALG7P07286 448 aa5.1□□□□□ -1.59
YML040WYML040W HRR25P29295 494 aaKnown RBP5.1□□□□□ -1.59
YML040WYML040W PRE2P30656 287 aaKnown RBP5.1□□□□□ -1.59
YML040WYML040W DSS4P32601 143 aa5.1□□□□□ -1.59
YML040WYML040W YER010CP40011 234 aa5.1□□□□□ -1.59
YML040WYML040W PSP1P50896 841 aaKnown RBP5.1□□□□□ -1.59
YML040WYML040W SNF12P53628 566 aa5.1□□□□□ -1.59
YML040WYML040W ARA2Q04212 335 aa5.1□□□□□ -1.59
YML040WYML040W YMR018WQ04364 514 aa5.1□□□□□ -1.59
YML040WYML040W IMH1Q06704 911 aaKnown RBP5.1□□□□□ -1.59
YML040WYML040W YLR040CQ07988 224 aa5.1□□□□□ -1.59
Retrieved 100 of 5,963 RNA–protein pairs in 41.4 ms