RNA–Protein interactions for RNA: YDR409W

SIZ1, Transcript of SUMO/Smt3 ligase, yeastyeast

Gene SIZ1, Length 2,715 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SIZ1YDR409W CAF16P43569 289 aa3.48□□□□□ -1.85
SIZ1YDR409W CCM1P48237 864 aaPredicted RBP3.48□□□□□ -1.85
SIZ1YDR409W AIM14P53109 570 aa3.48□□□□□ -1.85
SIZ1YDR409W NCE103P53615 221 aa3.48□□□□□ -1.85
SIZ1YDR409W ISU1Q03020 165 aa3.48□□□□□ -1.85
SIZ1YDR409W USA1Q03714 838 aa3.48□□□□□ -1.85
SIZ1YDR409W ARO80Q04052 950 aa3.48□□□□□ -1.85
SIZ1YDR409W HFD1Q04458 532 aa3.48□□□□□ -1.85
SIZ1YDR409W YMR114CQ04471 368 aaKnown RBP3.48□□□□□ -1.85
SIZ1YDR409W ECI1Q05871 280 aa3.48□□□□□ -1.85
SIZ1YDR409W OPY2Q06810 360 aa3.48□□□□□ -1.85
SIZ1YDR409W YOL075CQ08234 1294 aa3.48□□□□□ -1.85
SIZ1YDR409W GPN2Q08726 347 aaPredicted RBP3.48□□□□□ -1.85
SIZ1YDR409W GNT1Q12096 491 aa3.48□□□□□ -1.85
SIZ1YDR409W RIB2Q12362 591 aaKnown RBP3.48□□□□□ -1.85
SIZ1YDR409W NCA2Q12374 616 aa3.48□□□□□ -1.85
SIZ1YDR409W YOL159C-AQ3E769 90 aa3.48□□□□□ -1.85
SIZ1YDR409W POM152P39685 1337 aa3.48□□□□□ -1.85
SIZ1YDR409W SCP160P06105 1222 aaKnown RBP RIP-Chip data3.47□□□□□ -1.85not detected
SIZ1YDR409W YMR085WP0CF18 432 aa3.47□□□□□ -1.85
SIZ1YDR409W GLK1P17709 500 aaKnown RBP3.47□□□□□ -1.85
SIZ1YDR409W PYC2P32327 1180 aaKnown RBP3.47□□□□□ -1.85
SIZ1YDR409W YBR062CP38239 180 aa3.47□□□□□ -1.85
SIZ1YDR409W YBR225WP38321 900 aa3.47□□□□□ -1.85
SIZ1YDR409W RTS1P38903 757 aa3.47□□□□□ -1.85
SIZ1YDR409W CCT2P39076 527 aaKnown RBP3.47□□□□□ -1.85
SIZ1YDR409W TDA10P42938 290 aa3.47□□□□□ -1.85
SIZ1YDR409W SIP4P46954 829 aa3.47□□□□□ -1.85
SIZ1YDR409W MNN11P46985 422 aaKnown RBP3.47□□□□□ -1.85
SIZ1YDR409W SET2P46995 733 aaKnown RBP3.47□□□□□ -1.85
SIZ1YDR409W MDR1P53258 950 aa3.47□□□□□ -1.85
SIZ1YDR409W HDA1P53973 706 aa3.47□□□□□ -1.85
SIZ1YDR409W RSA3Q05942 220 aaKnown RBP3.47□□□□□ -1.85
SIZ1YDR409W YLH47Q06493 454 aa3.47□□□□□ -1.85
SIZ1YDR409W MLH2Q07980 695 aa3.47□□□□□ -1.85
SIZ1YDR409W APL5Q08951 932 aaKnown RBP3.47□□□□□ -1.85
SIZ1YDR409W OCA6Q12454 224 aa3.47□□□□□ -1.85
SIZ1YDR409W TUS1Q06412 1307 aa3.47□□□□□ -1.85
SIZ1YDR409W RIM15P43565 1770 aa3.47□□□□□ -1.85
SIZ1YDR409W CHO2P05374 869 aaKnown RBP3.47□□□□□ -1.85
SIZ1YDR409W TY1A-LR4P0C2I8 440 aaKnown RBP3.47□□□□□ -1.85
SIZ1YDR409W TY1A-DR6P0CX70 440 aa3.47□□□□□ -1.85
SIZ1YDR409W TY1A-ER1P0CX71 440 aa3.47□□□□□ -1.85
SIZ1YDR409W TY1A-LR2P0CX72 440 aa3.47□□□□□ -1.85
SIZ1YDR409W TY1A-PLP0CX73 440 aa3.47□□□□□ -1.85
SIZ1YDR409W TY1A-JR1P0CX74 440 aa3.47□□□□□ -1.85
SIZ1YDR409W TY1A-LR3P0CX75 440 aa3.47□□□□□ -1.85
SIZ1YDR409W TY1A-ML2P0CX76 440 aa3.47□□□□□ -1.85
SIZ1YDR409W PRP4P20053 465 aaKnown RBP3.47□□□□□ -1.85
SIZ1YDR409W SRO9P25567 434 aaKnown RBP3.47□□□□□ -1.85
SIZ1YDR409W YBR138CP38277 524 aa3.47□□□□□ -1.85
SIZ1YDR409W BEM4P39011 633 aa3.47□□□□□ -1.85
SIZ1YDR409W THI6P41835 540 aa3.47□□□□□ -1.85
SIZ1YDR409W SUM1P46676 1062 aa3.47□□□□□ -1.85
SIZ1YDR409W NOP9P47077 666 aaKnown RBP3.47□□□□□ -1.85
SIZ1YDR409W PTK2P47116 818 aaKnown RBP3.47□□□□□ -1.85
SIZ1YDR409W TSR2Q06672 205 aaKnown RBP3.47□□□□□ -1.85
SIZ1YDR409W TY1A-GR1Q12085 440 aa3.47□□□□□ -1.85
SIZ1YDR409W NBL1Q3E7Y6 73 aa3.47□□□□□ -1.85
SIZ1YDR409W TY1A-PR3Q6Q5H1 440 aaKnown RBP3.47□□□□□ -1.85
SIZ1YDR409W TY1A-OLQ92392 440 aaKnown RBP3.47□□□□□ -1.85
SIZ1YDR409W APM4Q99186 491 aa3.47□□□□□ -1.85
SIZ1YDR409W JIP3O13555 125 aa3.46□□□□□ -1.86
SIZ1YDR409W HTA1P04911 132 aaKnown RBP3.46□□□□□ -1.86
SIZ1YDR409W HTA2P04912 132 aa3.46□□□□□ -1.86
SIZ1YDR409W ERG11P10614 530 aa3.46□□□□□ -1.86
SIZ1YDR409W TAL1P15019 335 aaKnown RBP3.46□□□□□ -1.86
SIZ1YDR409W DAL80P26343 269 aa3.46□□□□□ -1.86
SIZ1YDR409W SEC21P32074 935 aaKnown RBP3.46□□□□□ -1.86
SIZ1YDR409W SMC1P32908 1225 aa3.46□□□□□ -1.86
SIZ1YDR409W NPP2P39997 493 aa3.46□□□□□ -1.86
SIZ1YDR409W SET4P42948 560 aa3.46□□□□□ -1.86
SIZ1YDR409W GUS1P46655 708 aaKnown RBP RIP-Chip data3.46□□□□□ -1.86not detected
SIZ1YDR409W RNR4P49723 345 aaKnown RBP3.46□□□□□ -1.86
SIZ1YDR409W ERV25P54837 211 aaKnown RBP3.46□□□□□ -1.86
SIZ1YDR409W BET4Q00618 327 aa3.46□□□□□ -1.86
SIZ1YDR409W RPS15Q01855 142 aaKnown RBP3.46□□□□□ -1.86
SIZ1YDR409W ESC8Q08119 714 aa3.46□□□□□ -1.86
SIZ1YDR409W YOR296WQ08748 1289 aa3.46□□□□□ -1.86
SIZ1YDR409W TMA46Q12000 345 aaKnown RBP3.46□□□□□ -1.86
SIZ1YDR409W YTM1Q12024 460 aaPredicted RBP3.46□□□□□ -1.86
SIZ1YDR409W HFI1Q12060 488 aa3.46□□□□□ -1.86
SIZ1YDR409W CFT2Q12102 859 aaPredicted RBP3.46□□□□□ -1.86
SIZ1YDR409W PHM7Q12252 991 aa3.46□□□□□ -1.86
SIZ1YDR409W YER152CP10356 443 aa3.46□□□□□ -1.86
SIZ1YDR409W RAD18P10862 487 aa3.46□□□□□ -1.86
SIZ1YDR409W ADP1P25371 1049 aa3.46□□□□□ -1.86
SIZ1YDR409W ILV6P25605 309 aaKnown RBP3.46□□□□□ -1.86
SIZ1YDR409W PRP45P28004 379 aaPredicted RBP3.46□□□□□ -1.86
SIZ1YDR409W NAM7P30771 971 aaKnown RBP3.46□□□□□ -1.86
SIZ1YDR409W MVD1P32377 396 aaKnown RBP3.46□□□□□ -1.86
SIZ1YDR409W UBC6P33296 250 aaPredicted RBP3.46□□□□□ -1.86
SIZ1YDR409W PXA2P34230 853 aa3.46□□□□□ -1.86
SIZ1YDR409W ATG19P35193 415 aa3.46□□□□□ -1.86
SIZ1YDR409W MTH1P35198 433 aa3.46□□□□□ -1.86
SIZ1YDR409W KSP1P38691 1029 aaKnown RBP3.46□□□□□ -1.86
SIZ1YDR409W SIP3P38717 1229 aa3.46□□□□□ -1.86
SIZ1YDR409W PEX28P38848 579 aa3.46□□□□□ -1.86
SIZ1YDR409W SMC2P38989 1170 aaKnown RBP3.46□□□□□ -1.86
SIZ1YDR409W SMX2P40204 77 aaKnown RBP3.46□□□□□ -1.86
Retrieved 100 of 5,963 RNA–protein pairs in 19.8 ms