RNA–Protein interactions for RNA: ENST00000641811.1

PHGDH-227, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,031 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-227ENST00000641811 SMARCA5O60264 1052 aaPredicted RBP21.2■□□□□ 0.98
PHGDH-227ENST00000641811 TNNI2P48788 182 aa21.2■□□□□ 0.98
PHGDH-227ENST00000641811 SUPT20HL1Q3ZLR7 823 aa21.2■□□□□ 0.98
PHGDH-227ENST00000641811 USP40Q9NVE5 1235 aa21.2■□□□□ 0.98
PHGDH-227ENST00000641811 LRP2BPQ9P2M1 347 aa21.2■□□□□ 0.98
PHGDH-227ENST00000641811 ANGEL1Q9UNK9 670 aaKnown RBP21.2■□□□□ 0.98
PHGDH-227ENST00000641811 GAKO14976 1311 aa21.2■□□□□ 0.98
PHGDH-227ENST00000641811 MYH2Q9UKX2 1941 aa21.19■□□□□ 0.98
PHGDH-227ENST00000641811 IFIT2P09913 472 aaKnown RBP21.19■□□□□ 0.98
PHGDH-227ENST00000641811 ARMC9Q7Z3E5 817 aa21.19■□□□□ 0.98
PHGDH-227ENST00000641811 NSUN4Q96CB9 384 aaKnown RBP21.19■□□□□ 0.98
PHGDH-227ENST00000641811 PIH1D3Q9NQM4 214 aaKnown RBP21.19■□□□□ 0.98
PHGDH-227ENST00000641811 NFIAQ12857 509 aa21.18■□□□□ 0.98
PHGDH-227ENST00000641811 FKBP1CQ5VVH2 108 aa21.18■□□□□ 0.98
PHGDH-227ENST00000641811 SLF2Q8IX21 1173 aa21.18■□□□□ 0.98
PHGDH-227ENST00000641811 FAM163AQ96GL9 167 aaPredicted RBP21.18■□□□□ 0.98
PHGDH-227ENST00000641811 DCTPP1Q9H773 170 aa21.18■□□□□ 0.98
PHGDH-227ENST00000641811 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.18■□□□□ 0.98
PHGDH-227ENST00000641811 SUPT16HQ9Y5B9 1047 aaKnown RBP21.18■□□□□ 0.98
PHGDH-227ENST00000641811 MROH7-TTC4A0A0A0MT08 1334 aa21.18■□□□□ 0.98
PHGDH-227ENST00000641811 SLC10A3P09131 477 aa21.17■□□□□ 0.98
PHGDH-227ENST00000641811 MAP2K2P36507 400 aa21.17■□□□□ 0.98
PHGDH-227ENST00000641811 BTDP43251 543 aa21.17■□□□□ 0.98
PHGDH-227ENST00000641811 TCP10Q12799 353 aa21.17■□□□□ 0.98
PHGDH-227ENST00000641811 CCDC102AQ96A19 550 aa21.17■□□□□ 0.98
PHGDH-227ENST00000641811 LRRCC1Q9C099 1032 aa21.17■□□□□ 0.98
PHGDH-227ENST00000641811 WBP1LQ9NX94 342 aa21.17■□□□□ 0.98
PHGDH-227ENST00000641811 THSD7BQ9C0I4 1608 aa21.17■□□□□ 0.98
PHGDH-227ENST00000641811 PPP1R12BO60237 982 aaPredicted RBP21.16■□□□□ 0.98
PHGDH-227ENST00000641811 USP2O75604 605 aaPredicted RBP21.16■□□□□ 0.98
PHGDH-227ENST00000641811 NOGQ13253 232 aa21.16■□□□□ 0.98
PHGDH-227ENST00000641811 LDLRAD1Q5T700 205 aa21.16■□□□□ 0.98
PHGDH-227ENST00000641811 FAM83AQ86UY5 434 aa21.16■□□□□ 0.98
PHGDH-227ENST00000641811 RASAL3Q86YV0 1011 aa21.16■□□□□ 0.98
PHGDH-227ENST00000641811 ANTXR1Q9H6X2 564 aa21.16■□□□□ 0.98
PHGDH-227ENST00000641811 FAM198AQ9UFP1 575 aa21.16■□□□□ 0.98
PHGDH-227ENST00000641811 GPR75-ASB3A0A0A6YYF3 556 aa21.15■□□□□ 0.98
PHGDH-227ENST00000641811 GSTO1P78417 241 aa21.15■□□□□ 0.98
PHGDH-227ENST00000641811 ZFPM1Q8IX07 1006 aa21.15■□□□□ 0.98
PHGDH-227ENST00000641811 CLMNQ96JQ2 1002 aa21.15■□□□□ 0.98
PHGDH-227ENST00000641811 FOXN1O15353 648 aa21.14■□□□□ 0.97
PHGDH-227ENST00000641811 LDHCP07864 332 aa21.14■□□□□ 0.97
PHGDH-227ENST00000641811 KIF23Q02241 960 aaPredicted RBP21.14■□□□□ 0.97
PHGDH-227ENST00000641811 MAP2K1Q02750 393 aaPredicted RBP21.14■□□□□ 0.97
PHGDH-227ENST00000641811 MAP3K11Q16584 847 aa21.14■□□□□ 0.97
PHGDH-227ENST00000641811 FAM151AQ8WW52 585 aa21.14■□□□□ 0.97
PHGDH-227ENST00000641811 MYO5AQ9Y4I1 1855 aaKnown RBP21.13■□□□□ 0.97
PHGDH-227ENST00000641811 RGS3P49796 1198 aa21.13■□□□□ 0.97
PHGDH-227ENST00000641811 RHBDL3P58872 404 aa21.13■□□□□ 0.97
PHGDH-227ENST00000641811 NAA16Q6N069 864 aaPredicted RBP21.13■□□□□ 0.97
PHGDH-227ENST00000641811 EXOC6Q8TAG9 804 aa21.13■□□□□ 0.97
PHGDH-227ENST00000641811 WDHD1O75717 1129 aaPredicted RBP21.12■□□□□ 0.97
PHGDH-227ENST00000641811 IDH1O75874 414 aaKnown RBP21.12■□□□□ 0.97
PHGDH-227ENST00000641811 IREB2P48200 963 aaKnown RBP21.12■□□□□ 0.97
PHGDH-227ENST00000641811 MKRN3Q13064 507 aaKnown RBP21.12■□□□□ 0.97
PHGDH-227ENST00000641811 ADGRA1Q86SQ6 560 aa21.12■□□□□ 0.97
PHGDH-227ENST00000641811 AIDAQ96BJ3 306 aa21.12■□□□□ 0.97
PHGDH-227ENST00000641811 DDX4Q9NQI0 724 aaKnown RBP21.12■□□□□ 0.97
PHGDH-227ENST00000641811 RFX7Q2KHR2 1363 aa21.11■□□□□ 0.97
PHGDH-227ENST00000641811 PICALMQ13492 652 aa21.11■□□□□ 0.97
PHGDH-227ENST00000641811 SLC10A4Q96EP9 437 aa21.11■□□□□ 0.97
PHGDH-227ENST00000641811 DNAJC2Q99543 621 aaKnown RBP21.11■□□□□ 0.97
PHGDH-227ENST00000641811 IDI2Q9BXS1 227 aa21.11■□□□□ 0.97
PHGDH-227ENST00000641811 MIGA2Q7L4E1 593 aa21.1■□□□□ 0.97
PHGDH-227ENST00000641811 EDC3Q96F86 508 aaKnown RBP21.1■□□□□ 0.97
PHGDH-227ENST00000641811 BOLA2Q9H3K6 86 aa21.1■□□□□ 0.97
PHGDH-227ENST00000641811 RPAP1Q9BWH6 1393 aaPredicted RBP21.1■□□□□ 0.97
PHGDH-227ENST00000641811 GOLIM4O00461 696 aa21.09■□□□□ 0.97
PHGDH-227ENST00000641811 CYP7A1P22680 504 aa21.09■□□□□ 0.97
PHGDH-227ENST00000641811 SH3BP5LQ7L8J4 393 aa21.09■□□□□ 0.97
PHGDH-227ENST00000641811 SH3RF3Q8TEJ3 882 aaPredicted RBP21.09■□□□□ 0.97
PHGDH-227ENST00000641811 PPIL4Q8WUA2 492 aaKnown RBP eCLIP21.09■□□□□ 0.97
PHGDH-227ENST00000641811 CSRNP1Q96S65 589 aa21.09■□□□□ 0.97
PHGDH-227ENST00000641811 AATFQ9NY61 560 aaKnown RBP eCLIP21.09■□□□□ 0.97
PHGDH-227ENST00000641811 MAST2Q6P0Q8 1798 aa21.09■□□□□ 0.97
PHGDH-227ENST00000641811 ENTPD3O75355 529 aa21.08■□□□□ 0.97
PHGDH-227ENST00000641811 ATP5JP18859 108 aa21.08■□□□□ 0.97
PHGDH-227ENST00000641811 IRX6P78412 446 aaPredicted RBP21.08■□□□□ 0.97
PHGDH-227ENST00000641811 PPP1R3FQ6ZSY5 799 aaPredicted RBP21.08■□□□□ 0.97
PHGDH-227ENST00000641811 ANKRD13AQ8IZ07 590 aa21.08■□□□□ 0.97
PHGDH-227ENST00000641811 MAGEB6Q8N7X4 407 aa21.08■□□□□ 0.97
PHGDH-227ENST00000641811 NOL10Q9BSC4 688 aaKnown RBP21.08■□□□□ 0.97
PHGDH-227ENST00000641811 BEGAINQ9BUH8 593 aa21.08■□□□□ 0.97
PHGDH-227ENST00000641811 TSKSQ9UJT2 592 aa21.08■□□□□ 0.97
PHGDH-227ENST00000641811 DDTLA6NHG4 134 aaPredicted RBP21.07■□□□□ 0.96
PHGDH-227ENST00000641811 MAP3K9P80192 1104 aa21.07■□□□□ 0.96
PHGDH-227ENST00000641811 SPRYD7Q5W111 196 aa21.07■□□□□ 0.96
PHGDH-227ENST00000641811 ZSCAN29Q8IWY8 852 aaPredicted RBP21.07■□□□□ 0.96
PHGDH-227ENST00000641811 TEX11Q8IYF3 940 aa21.07■□□□□ 0.96
PHGDH-227ENST00000641811 DDX55Q8NHQ9 600 aaKnown RBP eCLIP21.07■□□□□ 0.962e-7■■□□□ 13.6
PHGDH-227ENST00000641811 ELP3Q9H9T3 547 aa21.07■□□□□ 0.96
PHGDH-227ENST00000641811 OTOFQ9HC10 1997 aa21.06■□□□□ 0.96
PHGDH-227ENST00000641811 UNCXA6NJT0 531 aa21.06■□□□□ 0.96
PHGDH-227ENST00000641811 SLURP2P0DP57 97 aa21.06■□□□□ 0.96
PHGDH-227ENST00000641811 CTCFP49711 727 aaPredicted RBP21.06■□□□□ 0.96
PHGDH-227ENST00000641811 DYNLL1P63167 89 aaKnown RBP21.06■□□□□ 0.96
PHGDH-227ENST00000641811 MAP3K12Q12852 859 aa21.06■□□□□ 0.96
PHGDH-227ENST00000641811 HDAC1Q13547 482 aaPredicted RBP21.06■□□□□ 0.96
PHGDH-227ENST00000641811 VGLL4Q14135 290 aa21.06■□□□□ 0.96
PHGDH-227ENST00000641811 TTF1Q15361 905 aaPredicted RBP21.06■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 130.4 ms