RNA–Protein interactions for RNA: ENST00000641476.1

SRRT-219, Transcript of serrate, RNA effector molecule, humanhuman

Gene SRRT, Length 992 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-219ENST00000641476 TCP10L2B9ZVM9 353 aa18.21■□□□□ 0.51
SRRT-219ENST00000641476 ECM2O94769 699 aaPredicted RBP18.21■□□□□ 0.51
SRRT-219ENST00000641476 DPF3Q92784 378 aa18.21■□□□□ 0.51
SRRT-219ENST00000641476 RBM27Q9P2N5 1060 aaKnown RBP18.21■□□□□ 0.51
SRRT-219ENST00000641476 FBXO3Q9UK99 471 aa18.21■□□□□ 0.51
SRRT-219ENST00000641476 KIF22Q14807 665 aa18.2■□□□□ 0.5
SRRT-219ENST00000641476 ATP2B3Q16720 1220 aa18.2■□□□□ 0.5
SRRT-219ENST00000641476 ZDHHC15Q96MV8 337 aa18.2■□□□□ 0.5
SRRT-219ENST00000641476 TMEM39BQ9GZU3 492 aa18.2■□□□□ 0.5
SRRT-219ENST00000641476 PA2G4Q9UQ80 394 aaKnown RBP18.2■□□□□ 0.5
SRRT-219ENST00000641476 SUGT1Q9Y2Z0 365 aa18.2■□□□□ 0.5
SRRT-219ENST00000641476 CSADQ9Y600 493 aa18.2■□□□□ 0.5
SRRT-219ENST00000641476 WDHD1O75717 1129 aaPredicted RBP18.19■□□□□ 0.5
SRRT-219ENST00000641476 TNNI2P48788 182 aa18.19■□□□□ 0.5
SRRT-219ENST00000641476 CACNB3P54284 484 aa18.19■□□□□ 0.5
SRRT-219ENST00000641476 MAP3K9P80192 1104 aa18.19■□□□□ 0.5
SRRT-219ENST00000641476 LACTBP83111 547 aaPredicted RBP18.19■□□□□ 0.5
SRRT-219ENST00000641476 ARHGAP45Q92619 1136 aa18.19■□□□□ 0.5
SRRT-219ENST00000641476 RPAP1Q9BWH6 1393 aaPredicted RBP18.18■□□□□ 0.5
SRRT-219ENST00000641476 TLR2O60603 784 aa18.18■□□□□ 0.5
SRRT-219ENST00000641476 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.18■□□□□ 0.5
SRRT-219ENST00000641476 SHISA4Q96DD7 197 aa18.18■□□□□ 0.5
SRRT-219ENST00000641476 HDAC5Q9UQL6 1122 aa18.18■□□□□ 0.5
SRRT-219ENST00000641476 CEP290O15078 2479 aa18.18■□□□□ 0.5
SRRT-219ENST00000641476 DLL1O00548 723 aa18.17■□□□□ 0.5
SRRT-219ENST00000641476 IL15P40933 162 aaPredicted RBP18.17■□□□□ 0.5
SRRT-219ENST00000641476 MTFR1Q15390 333 aa18.17■□□□□ 0.5
SRRT-219ENST00000641476 APOBEC3HQ6NTF7 200 aaKnown RBP18.17■□□□□ 0.5
SRRT-219ENST00000641476 WDR66Q8TBY9 1149 aa18.17■□□□□ 0.5
SRRT-219ENST00000641476 COPRSQ9NQ92 184 aa18.17■□□□□ 0.5
SRRT-219ENST00000641476 TMOD2Q9NZR1 351 aa18.17■□□□□ 0.5
SRRT-219ENST00000641476 CEP126Q9P2H0 1117 aa18.17■□□□□ 0.5
SRRT-219ENST00000641476 RANBP2P49792 3224 aaKnown RBP18.17■□□□□ 0.5
SRRT-219ENST00000641476 CETPP11597 493 aa18.16■□□□□ 0.5
SRRT-219ENST00000641476 TRIM27P14373 513 aa18.16■□□□□ 0.5
SRRT-219ENST00000641476 DIEXFQ68CQ4 756 aaKnown RBP18.16■□□□□ 0.5
SRRT-219ENST00000641476 SLC17A8Q8NDX2 589 aa18.16■□□□□ 0.5
SRRT-219ENST00000641476 TNNQ9UQP3 1299 aa18.16■□□□□ 0.5
SRRT-219ENST00000641476 SPDYE5A6NIY4 337 aa18.15■□□□□ 0.5
SRRT-219ENST00000641476 BTBD19C9JJ37 291 aa18.15■□□□□ 0.5
SRRT-219ENST00000641476 GNRH1P01148 92 aa18.15■□□□□ 0.5
SRRT-219ENST00000641476 GNAI3P08754 354 aa18.15■□□□□ 0.5
SRRT-219ENST00000641476 PRDX5P30044 214 aa18.15■□□□□ 0.5
SRRT-219ENST00000641476 PHKA1P46020 1223 aa18.15■□□□□ 0.5
SRRT-219ENST00000641476 HHIPL2Q6UWX4 724 aa18.15■□□□□ 0.5
SRRT-219ENST00000641476 MRIQ9BWK5 157 aa18.15■□□□□ 0.5
SRRT-219ENST00000641476 DOCK2Q92608 1830 aa18.14■□□□□ 0.5
SRRT-219ENST00000641476 ADORA1P30542 326 aa18.14■□□□□ 0.49
SRRT-219ENST00000641476 PRMT2P55345 433 aa18.14■□□□□ 0.49
SRRT-219ENST00000641476 MTX1Q13505 466 aa18.14■□□□□ 0.49
SRRT-219ENST00000641476 DIXDC1Q155Q3 683 aa18.14■□□□□ 0.49
SRRT-219ENST00000641476 FKBP1CQ5VVH2 108 aa18.14■□□□□ 0.49
SRRT-219ENST00000641476 FAM83AQ86UY5 434 aa18.14■□□□□ 0.49
SRRT-219ENST00000641476 GNL3LQ9NVN8 582 aaKnown RBP18.14■□□□□ 0.49
SRRT-219ENST00000641476 DAGLAQ9Y4D2 1042 aa18.14■□□□□ 0.49
SRRT-219ENST00000641476 SNCAIPQ9Y6H5 919 aa18.14■□□□□ 0.49
SRRT-219ENST00000641476 ZSWIM8A7E2V4 1837 aa18.14■□□□□ 0.49
SRRT-219ENST00000641476 MYH2Q9UKX2 1941 aa18.13■□□□□ 0.49
SRRT-219ENST00000641476 IRF6O14896 467 aa18.13■□□□□ 0.49
SRRT-219ENST00000641476 SEMA3EO15041 775 aa18.13■□□□□ 0.49
SRRT-219ENST00000641476 SRGAP3O43295 1099 aa18.13■□□□□ 0.49
SRRT-219ENST00000641476 BCAR3O75815 825 aa18.13■□□□□ 0.49
SRRT-219ENST00000641476 SNAPC2Q13487 334 aa18.13■□□□□ 0.49
SRRT-219ENST00000641476 ATF7IPQ6VMQ6 1270 aa18.13■□□□□ 0.49
SRRT-219ENST00000641476 ERO1BQ86YB8 467 aa18.13■□□□□ 0.49
SRRT-219ENST00000641476 WRNIP1Q96S55 665 aa18.13■□□□□ 0.49
SRRT-219ENST00000641476 SALL1Q9NSC2 1324 aa18.13■□□□□ 0.49
SRRT-219ENST00000641476 IPO8O15397 1037 aaKnown RBP18.12■□□□□ 0.49
SRRT-219ENST00000641476 CTGFP29279 349 aa18.12■□□□□ 0.49
SRRT-219ENST00000641476 NKX2-3Q8TAU0 364 aa18.12■□□□□ 0.49
SRRT-219ENST00000641476 RAET1EQ8TD07 263 aa18.12■□□□□ 0.49
SRRT-219ENST00000641476 FRAT1Q92837 279 aaPredicted RBP18.12■□□□□ 0.49
SRRT-219ENST00000641476 ZKSCAN4Q969J2 545 aaPredicted RBP18.12■□□□□ 0.49
SRRT-219ENST00000641476 HTATIP2Q9BUP3 242 aa18.12■□□□□ 0.49
SRRT-219ENST00000641476 ZCCHC17Q9NP64 241 aaKnown RBP18.12■□□□□ 0.49
SRRT-219ENST00000641476 SRRDQ9UH36 339 aa18.12■□□□□ 0.49
SRRT-219ENST00000641476 CPA4Q9UI42 421 aa18.12■□□□□ 0.49
SRRT-219ENST00000641476 DENND2AQ9ULE3 1009 aa18.12■□□□□ 0.49
SRRT-219ENST00000641476 LDHBP07195 334 aaKnown RBP18.11■□□□□ 0.49
SRRT-219ENST00000641476 PSMC4P43686 418 aa18.11■□□□□ 0.49
SRRT-219ENST00000641476 CCDC102BQ68D86 513 aa18.11■□□□□ 0.49
SRRT-219ENST00000641476 TRIM47Q96LD4 638 aa18.11■□□□□ 0.49
SRRT-219ENST00000641476 RFX7Q2KHR2 1363 aa18.1■□□□□ 0.49
SRRT-219ENST00000641476 PDS5AQ29RF7 1337 aaKnown RBP18.1■□□□□ 0.49
SRRT-219ENST00000641476 ZBTB22O15209 634 aa18.1■□□□□ 0.49
SRRT-219ENST00000641476 CCL5P13501 91 aa18.1■□□□□ 0.49
SRRT-219ENST00000641476 GRK4P32298 578 aa18.1■□□□□ 0.49
SRRT-219ENST00000641476 HNRNPUQ00839 825 aaKnown RBP eCLIP18.1■□□□□ 0.49
SRRT-219ENST00000641476 RASGRF1Q13972 1273 aa18.1■□□□□ 0.49
SRRT-219ENST00000641476 C17orf99Q6UX52 265 aa18.1■□□□□ 0.49
SRRT-219ENST00000641476 CLUAP1Q96AJ1 413 aa18.1■□□□□ 0.49
SRRT-219ENST00000641476 HOOK2Q96ED9 719 aa18.1■□□□□ 0.49
SRRT-219ENST00000641476 BIN2Q9UBW5 565 aaPredicted RBP18.1■□□□□ 0.49
SRRT-219ENST00000641476 NR2E3Q9Y5X4 410 aa18.1■□□□□ 0.49
SRRT-219ENST00000641476 MYPNQ86TC9 1320 aa18.09■□□□□ 0.49
SRRT-219ENST00000641476 A0A1B0GUL7 405 aa18.09■□□□□ 0.49
SRRT-219ENST00000641476 FMNL1O95466 1100 aaPredicted RBP18.09■□□□□ 0.49
SRRT-219ENST00000641476 GNAI2P04899 355 aa18.09■□□□□ 0.49
SRRT-219ENST00000641476 OSBPP22059 807 aa18.09■□□□□ 0.49
SRRT-219ENST00000641476 GJA8P48165 433 aa18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms