RNA–Protein interactions for RNA: ENST00000640341.1

SCARB2-221, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 3,403 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-221ENST00000640341 ERVV-2B6SEH9 535 aa16.86■□□□□ 0.29
SCARB2-221ENST00000640341 DMTNQ08495 405 aa16.86■□□□□ 0.29
SCARB2-221ENST00000640341 MIGA1Q8NAN2 632 aa16.86■□□□□ 0.29
SCARB2-221ENST00000640341 UTP14AQ9BVJ6 771 aaKnown RBP16.86■□□□□ 0.29
SCARB2-221ENST00000640341 NBPF3Q9H094 633 aa16.86■□□□□ 0.29
SCARB2-221ENST00000640341 NAPBQ9H115 298 aa16.86■□□□□ 0.29
SCARB2-221ENST00000640341 NEDD4P46934 1319 aa16.85■□□□□ 0.29
SCARB2-221ENST00000640341 NYAP1Q6ZVC0 841 aa16.85■□□□□ 0.29
SCARB2-221ENST00000640341 MAGEB6Q8N7X4 407 aa16.85■□□□□ 0.29
SCARB2-221ENST00000640341 ARMT1Q9H993 441 aa16.85■□□□□ 0.29
SCARB2-221ENST00000640341 SLC12A7Q9Y666 1083 aa16.85■□□□□ 0.29
SCARB2-221ENST00000640341 SPATA31A3Q5VYP0 1347 aa16.85■□□□□ 0.29
SCARB2-221ENST00000640341 CDK11BP21127 795 aaKnown RBP16.85■□□□□ 0.29
SCARB2-221ENST00000640341 CMA1P23946 247 aa16.85■□□□□ 0.29
SCARB2-221ENST00000640341 KMT5BQ4FZB7 885 aa16.85■□□□□ 0.29
SCARB2-221ENST00000640341 CCDC102BQ68D86 513 aa16.85■□□□□ 0.29
SCARB2-221ENST00000640341 SHC4Q6S5L8 630 aa16.85■□□□□ 0.29
SCARB2-221ENST00000640341 ZBTB38Q8NAP3 1195 aaPredicted RBP16.85■□□□□ 0.29
SCARB2-221ENST00000640341 PPP1R13BQ96KQ4 1090 aa16.85■□□□□ 0.29
SCARB2-221ENST00000640341 WDR17Q8IZU2 1322 aa16.85■□□□□ 0.29
SCARB2-221ENST00000640341 hCG_1642624A0A1W2PR95 340 aa16.84■□□□□ 0.29
SCARB2-221ENST00000640341 ADD2P35612 726 aa16.84■□□□□ 0.29
SCARB2-221ENST00000640341 SLC39A14Q15043 492 aa16.84■□□□□ 0.29
SCARB2-221ENST00000640341 LONRF3Q496Y0 759 aa16.84■□□□□ 0.29
SCARB2-221ENST00000640341 TTLL11Q8NHH1 800 aa16.84■□□□□ 0.29
SCARB2-221ENST00000640341 BTBD18B2RXH4 712 aa16.84■□□□□ 0.29
SCARB2-221ENST00000640341 TMEM232C9JQI7 657 aa16.84■□□□□ 0.29
SCARB2-221ENST00000640341 PRKAB2O43741 272 aa16.84■□□□□ 0.29
SCARB2-221ENST00000640341 MBD4O95243 580 aa16.84■□□□□ 0.29
SCARB2-221ENST00000640341 PDE6AP16499 860 aa16.84■□□□□ 0.29
SCARB2-221ENST00000640341 TRMT44Q8IYL2 757 aaKnown RBP16.84■□□□□ 0.29
SCARB2-221ENST00000640341 GRAMD1CQ8IYS0 662 aa16.84■□□□□ 0.29
SCARB2-221ENST00000640341 FANCLQ9NW38 375 aa16.84■□□□□ 0.29
SCARB2-221ENST00000640341 SLU7O95391 586 aaKnown RBP16.84■□□□□ 0.29
SCARB2-221ENST00000640341 STARD3NLO95772 234 aa16.84■□□□□ 0.29
SCARB2-221ENST00000640341 FBXO38Q6PIJ6 1188 aa16.84■□□□□ 0.29
SCARB2-221ENST00000640341 OLFM4Q6UX06 510 aa16.84■□□□□ 0.29
SCARB2-221ENST00000640341 PCCAP05165 728 aaPredicted RBP16.83■□□□□ 0.29
SCARB2-221ENST00000640341 GUCY1A2P33402 732 aa16.83■□□□□ 0.29
SCARB2-221ENST00000640341 TDO2P48775 406 aa16.83■□□□□ 0.29
SCARB2-221ENST00000640341 CREBRFQ8IUR6 639 aa16.83■□□□□ 0.29
SCARB2-221ENST00000640341 PIGBQ92521 554 aa16.83■□□□□ 0.29
SCARB2-221ENST00000640341 ATG3Q9NT62 314 aa16.83■□□□□ 0.29
SCARB2-221ENST00000640341 SIPA1L3O60292 1781 aaPredicted RBP16.83■□□□□ 0.28
SCARB2-221ENST00000640341 CDKL5O76039 1030 aa16.83■□□□□ 0.28
SCARB2-221ENST00000640341 URI1O94763 535 aaPredicted RBP16.83■□□□□ 0.28
SCARB2-221ENST00000640341 GRIN1Q05586 938 aa16.83■□□□□ 0.28
SCARB2-221ENST00000640341 NCAPHQ15003 741 aa16.83■□□□□ 0.28
SCARB2-221ENST00000640341 JMYQ8N9B5 988 aa16.83■□□□□ 0.28
SCARB2-221ENST00000640341 RIPOR2Q9Y4F9 1068 aa16.83■□□□□ 0.28
SCARB2-221ENST00000640341 PCDHA5Q9Y5H7 936 aa16.83■□□□□ 0.28
SCARB2-221ENST00000640341 ZMYM6O95789 1325 aa16.83■□□□□ 0.28
SCARB2-221ENST00000640341 ST7Q9NRC1 585 aa16.82■□□□□ 0.28
SCARB2-221ENST00000640341 OGFRQ9NZT2 677 aa16.82■□□□□ 0.28
SCARB2-221ENST00000640341 ZSWIM5Q9P217 1185 aa16.82■□□□□ 0.28
SCARB2-221ENST00000640341 SCN11AQ9UI33 1791 aa16.82■□□□□ 0.28
SCARB2-221ENST00000640341 SH2B2O14492 632 aaPredicted RBP16.82■□□□□ 0.28
SCARB2-221ENST00000640341 RANBP6O60518 1105 aaKnown RBP16.82■□□□□ 0.28
SCARB2-221ENST00000640341 TOP1P11387 765 aaKnown RBP16.82■□□□□ 0.28
SCARB2-221ENST00000640341 CCDC150Q8NCX0 1101 aa16.82■□□□□ 0.28
SCARB2-221ENST00000640341 KCNH3Q9ULD8 1083 aa16.82■□□□□ 0.28
SCARB2-221ENST00000640341 MINDY4BA8MYZ0 360 aa16.82■□□□□ 0.28
SCARB2-221ENST00000640341 CTSWP56202 376 aa16.82■□□□□ 0.28
SCARB2-221ENST00000640341 EVCP57679 992 aa16.82■□□□□ 0.28
SCARB2-221ENST00000640341 ZBTB1Q9Y2K1 713 aa16.82■□□□□ 0.28
SCARB2-221ENST00000640341 ARFGEF2Q9Y6D5 1785 aa16.81■□□□□ 0.28
SCARB2-221ENST00000640341 MYL5Q02045 173 aa16.81■□□□□ 0.28
SCARB2-221ENST00000640341 SSRP1Q08945 709 aaKnown RBP16.81■□□□□ 0.28
SCARB2-221ENST00000640341 KLHL10Q6JEL2 608 aa16.81■□□□□ 0.28
SCARB2-221ENST00000640341 NLRP10Q86W26 655 aa16.81■□□□□ 0.28
SCARB2-221ENST00000640341 ABCF2Q9UG63 623 aa16.81■□□□□ 0.28
SCARB2-221ENST00000640341 MST1RQ04912 1400 aa16.81■□□□□ 0.28
SCARB2-221ENST00000640341 NR5A1Q13285 461 aa16.81■□□□□ 0.28
SCARB2-221ENST00000640341 FEZ1Q99689 392 aa16.81■□□□□ 0.28
SCARB2-221ENST00000640341 TNS3Q68CZ2 1445 aa16.81■□□□□ 0.28
SCARB2-221ENST00000640341 PDE8BO95263 885 aa16.8■□□□□ 0.28
SCARB2-221ENST00000640341 OSBPL5Q9H0X9 879 aaPredicted RBP16.8■□□□□ 0.28
SCARB2-221ENST00000640341 PHRF1Q9P1Y6 1649 aaKnown RBP16.8■□□□□ 0.28
SCARB2-221ENST00000640341 POLR2DO15514 142 aaKnown RBP16.8■□□□□ 0.28
SCARB2-221ENST00000640341 SAFBQ15424 915 aaKnown RBP eCLIP16.8■□□□□ 0.28
SCARB2-221ENST00000640341 BRINP3Q76B58 766 aa16.8■□□□□ 0.28
SCARB2-221ENST00000640341 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.8■□□□□ 0.28
SCARB2-221ENST00000640341 MPHOSPH8Q99549 860 aa16.8■□□□□ 0.28
SCARB2-221ENST00000640341 IMPACTQ9P2X3 320 aa16.8■□□□□ 0.28
SCARB2-221ENST00000640341 UBN2Q6ZU65 1347 aa16.8■□□□□ 0.28
SCARB2-221ENST00000640341 GIGYF2Q6Y7W6 1299 aaKnown RBP16.8■□□□□ 0.28
SCARB2-221ENST00000640341 FOXP4Q8IVH2 680 aaPredicted RBP16.8■□□□□ 0.28
SCARB2-221ENST00000640341 DIS3L2Q8IYB7 885 aaKnown RBP16.8■□□□□ 0.28
SCARB2-221ENST00000640341 ZNF397Q8NF99 534 aaPredicted RBP16.8■□□□□ 0.28
SCARB2-221ENST00000640341 ERO1AQ96HE7 468 aa16.8■□□□□ 0.28
SCARB2-221ENST00000640341 ADKP55263 362 aaKnown RBP16.79■□□□□ 0.28
SCARB2-221ENST00000640341 PDE4BQ07343 736 aa16.79■□□□□ 0.28
SCARB2-221ENST00000640341 METTL16Q86W50 562 aaKnown RBP16.79■□□□□ 0.28
SCARB2-221ENST00000640341 EPC1Q9H2F5 836 aa16.79■□□□□ 0.28
SCARB2-221ENST00000640341 LAMA4Q16363 1823 aa16.79■□□□□ 0.28
SCARB2-221ENST00000640341 TTF1Q15361 905 aaPredicted RBP16.79■□□□□ 0.28
SCARB2-221ENST00000640341 ARHGAP29Q52LW3 1261 aa16.79■□□□□ 0.28
SCARB2-221ENST00000640341 IFNL3Q8IZI9 196 aa16.79■□□□□ 0.28
SCARB2-221ENST00000640341 MNS1Q8NEH6 495 aa16.79■□□□□ 0.28
SCARB2-221ENST00000640341 CPLX3Q8WVH0 158 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms