RNA–Protein interactions for RNA: ENST00000639715.1

SCARB2-218, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 4,355 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-218ENST00000639715 USP16Q9Y5T5 823 aa6.45□□□□□ -1.38
SCARB2-218ENST00000639715 TNKS1BP1Q9C0C2 1729 aaKnown RBP6.45□□□□□ -1.38
SCARB2-218ENST00000639715 ZSCAN12O43309 604 aa6.45□□□□□ -1.38
SCARB2-218ENST00000639715 RPS6KB1P23443 525 aa6.45□□□□□ -1.38
SCARB2-218ENST00000639715 RANBP1P43487 201 aa6.45□□□□□ -1.38
SCARB2-218ENST00000639715 DDX46Q7L014 1031 aaKnown RBP6.45□□□□□ -1.38
SCARB2-218ENST00000639715 KCNG4Q8TDN1 519 aa6.45□□□□□ -1.38
SCARB2-218ENST00000639715 GOLGA1Q92805 767 aa6.45□□□□□ -1.38
SCARB2-218ENST00000639715 LLPHQ9BRT6 129 aaKnown RBP6.45□□□□□ -1.38
SCARB2-218ENST00000639715 UBAC1Q9BSL1 405 aa6.45□□□□□ -1.38
SCARB2-218ENST00000639715 ORC3Q9UBD5 711 aaPredicted RBP6.45□□□□□ -1.38
SCARB2-218ENST00000639715 RGS17Q9UGC6 210 aaPredicted RBP6.45□□□□□ -1.38
SCARB2-218ENST00000639715 FAN1Q9Y2M0 1017 aa6.45□□□□□ -1.38
SCARB2-218ENST00000639715 NLRP1Q9C000 1473 aa6.44□□□□□ -1.38
SCARB2-218ENST00000639715 ARHGAP23Q9P227 1491 aa6.44□□□□□ -1.38
SCARB2-218ENST00000639715 GOLGA8BA8MQT2 603 aa6.44□□□□□ -1.38
SCARB2-218ENST00000639715 POTEB2H3BUK9 544 aa6.44□□□□□ -1.38
SCARB2-218ENST00000639715 RBM5P52756 815 aaKnown RBP eCLIP6.44□□□□□ -1.38
SCARB2-218ENST00000639715 CCT2P78371 535 aaKnown RBP6.44□□□□□ -1.38
SCARB2-218ENST00000639715 MAP3K12Q12852 859 aa6.44□□□□□ -1.38
SCARB2-218ENST00000639715 SLC39A6Q13433 755 aa6.44□□□□□ -1.38
SCARB2-218ENST00000639715 BEND3Q5T5X7 828 aa6.44□□□□□ -1.38
SCARB2-218ENST00000639715 MFSD4BQ5TF39 518 aa6.44□□□□□ -1.38
SCARB2-218ENST00000639715 ZNF790Q6PG37 636 aa6.44□□□□□ -1.38
SCARB2-218ENST00000639715 Q6ZUG5 572 aa6.44□□□□□ -1.38
SCARB2-218ENST00000639715 TMC6Q7Z403 805 aa6.44□□□□□ -1.38
SCARB2-218ENST00000639715 MIEF2Q96C03 454 aa6.44□□□□□ -1.38
SCARB2-218ENST00000639715 RBM33Q96EV2 1170 aaKnown RBP6.44□□□□□ -1.38
SCARB2-218ENST00000639715 C19orf44Q9H6X5 657 aa6.44□□□□□ -1.38
SCARB2-218ENST00000639715 HELLSQ9NRZ9 838 aa6.44□□□□□ -1.38
SCARB2-218ENST00000639715 ETAA1Q9NY74 926 aa6.44□□□□□ -1.38
SCARB2-218ENST00000639715 BIN2Q9UBW5 565 aaPredicted RBP6.44□□□□□ -1.38
SCARB2-218ENST00000639715 ANKRD18BA2A2Z9 1011 aa6.44□□□□□ -1.38
SCARB2-218ENST00000639715 ENO4A6NNW6 628 aa6.44□□□□□ -1.38
SCARB2-218ENST00000639715 SLC27A2O14975 620 aa6.44□□□□□ -1.38
SCARB2-218ENST00000639715 GCFC2P16383 781 aaKnown RBP6.44□□□□□ -1.38
SCARB2-218ENST00000639715 POLD1P28340 1107 aa6.44□□□□□ -1.38
SCARB2-218ENST00000639715 PPFIBP1Q86W92 1011 aa6.44□□□□□ -1.38
SCARB2-218ENST00000639715 GPR161Q8N6U8 529 aaKnown RBP6.44□□□□□ -1.38
SCARB2-218ENST00000639715 NFATC2IPQ8NCF5 419 aa6.44□□□□□ -1.38
SCARB2-218ENST00000639715 TBC1D22AQ8WUA7 517 aa6.44□□□□□ -1.38
SCARB2-218ENST00000639715 ITFG2Q969R8 447 aa6.44□□□□□ -1.38
SCARB2-218ENST00000639715 SPDL1Q96EA4 605 aa6.44□□□□□ -1.38
SCARB2-218ENST00000639715 TCEANC2Q96MN5 208 aa6.44□□□□□ -1.38
SCARB2-218ENST00000639715 NAPBQ9H115 298 aa6.44□□□□□ -1.38
SCARB2-218ENST00000639715 CBX8Q9HC52 389 aa6.44□□□□□ -1.38
SCARB2-218ENST00000639715 PAG1Q9NWQ8 432 aa6.44□□□□□ -1.38
SCARB2-218ENST00000639715 PALD1Q9ULE6 856 aa6.44□□□□□ -1.38
SCARB2-218ENST00000639715 PLEKHG2Q9H7P9 1386 aa6.44□□□□□ -1.38
SCARB2-218ENST00000639715 USP32Q8NFA0 1604 aa6.44□□□□□ -1.38
SCARB2-218ENST00000639715 GIGYF1O75420 1035 aaPredicted RBP6.43□□□□□ -1.38
SCARB2-218ENST00000639715 UQCRFS1P1P0C7P4 283 aa6.43□□□□□ -1.38
SCARB2-218ENST00000639715 E2F5Q15329 346 aa6.43□□□□□ -1.38
SCARB2-218ENST00000639715 LRRC8AQ8IWT6 810 aa6.43□□□□□ -1.38
SCARB2-218ENST00000639715 RNF41Q9H4P4 317 aaPredicted RBP6.43□□□□□ -1.38
SCARB2-218ENST00000639715 ZBTB3Q9H5J0 574 aa6.43□□□□□ -1.38
SCARB2-218ENST00000639715 BSDC1Q9NW68 430 aaPredicted RBP6.43□□□□□ -1.38
SCARB2-218ENST00000639715 KDRP35968 1356 aa6.43□□□□□ -1.38
SCARB2-218ENST00000639715 COL16A1Q07092 1604 aaPredicted RBP6.43□□□□□ -1.38
SCARB2-218ENST00000639715 EFCAB8A8MWE9 144 aa6.43□□□□□ -1.38
SCARB2-218ENST00000639715 RNF113AO15541 343 aaKnown RBP6.43□□□□□ -1.38
SCARB2-218ENST00000639715 ATP2C2O75185 946 aa6.43□□□□□ -1.38
SCARB2-218ENST00000639715 IGHMBP2P38935 993 aaKnown RBP6.43□□□□□ -1.38
SCARB2-218ENST00000639715 LONRF2Q1L5Z9 754 aa6.43□□□□□ -1.38
SCARB2-218ENST00000639715 CFAP100Q494V2 611 aa6.43□□□□□ -1.38
SCARB2-218ENST00000639715 B4GALNT4Q76KP1 1039 aa6.43□□□□□ -1.38
SCARB2-218ENST00000639715 MRPS27Q92552 414 aaKnown RBP6.43□□□□□ -1.38
SCARB2-218ENST00000639715 ZSWIM6Q9HCJ5 1215 aa6.43□□□□□ -1.38
SCARB2-218ENST00000639715 NDUFAB1O14561 156 aa6.43□□□□□ -1.38
SCARB2-218ENST00000639715 GUCY1B3Q02153 619 aa6.43□□□□□ -1.38
SCARB2-218ENST00000639715 KIF4BQ2VIQ3 1234 aa6.43□□□□□ -1.38
SCARB2-218ENST00000639715 LDHAL6AQ6ZMR3 332 aa6.43□□□□□ -1.38
SCARB2-218ENST00000639715 STK11IPQ8N1F8 1099 aa6.43□□□□□ -1.38
SCARB2-218ENST00000639715 CCDC150Q8NCX0 1101 aa6.43□□□□□ -1.38
SCARB2-218ENST00000639715 PLBD2Q8NHP8 589 aa6.43□□□□□ -1.38
SCARB2-218ENST00000639715 ZCRB1Q8TBF4 217 aaKnown RBP6.43□□□□□ -1.38
SCARB2-218ENST00000639715 ZBTB10Q96DT7 871 aa6.43□□□□□ -1.38
SCARB2-218ENST00000639715 ANAPC4Q9UJX5 808 aa6.43□□□□□ -1.38
SCARB2-218ENST00000639715 SLC5A1P13866 664 aa6.43□□□□□ -1.38
SCARB2-218ENST00000639715 ATP5JP18859 108 aa6.43□□□□□ -1.38
SCARB2-218ENST00000639715 IARSP41252 1262 aaKnown RBP6.43□□□□□ -1.38
SCARB2-218ENST00000639715 GSCP56915 257 aaPredicted RBP6.43□□□□□ -1.38
SCARB2-218ENST00000639715 ACTN3Q08043 901 aaPredicted RBP6.43□□□□□ -1.38
SCARB2-218ENST00000639715 TFCP2Q12800 502 aa6.43□□□□□ -1.38
SCARB2-218ENST00000639715 GCKRQ14397 625 aa6.43□□□□□ -1.38
SCARB2-218ENST00000639715 TNNI3KQ59H18 835 aa6.43□□□□□ -1.38
SCARB2-218ENST00000639715 PCMTD1Q96MG8 357 aaPredicted RBP6.43□□□□□ -1.38
SCARB2-218ENST00000639715 PSD3Q9NYI0 1048 aa6.43□□□□□ -1.38
SCARB2-218ENST00000639715 LRP2BPQ9P2M1 347 aa6.43□□□□□ -1.38
SCARB2-218ENST00000639715 SLC12A7Q9Y666 1083 aa6.43□□□□□ -1.38
SCARB2-218ENST00000639715 FPGT-TNNI3KV9GXZ4 949 aa6.43□□□□□ -1.38
SCARB2-218ENST00000639715 AP1G2O75843 785 aa6.42□□□□□ -1.38
SCARB2-218ENST00000639715 PDCD2Q16342 344 aaPredicted RBP6.42□□□□□ -1.38
SCARB2-218ENST00000639715 FAM76AQ8TAV0 307 aa6.42□□□□□ -1.38
SCARB2-218ENST00000639715 BCAS4Q8TDM0 211 aa6.42□□□□□ -1.38
SCARB2-218ENST00000639715 CCDC12Q8WUD4 166 aaPredicted RBP6.42□□□□□ -1.38
SCARB2-218ENST00000639715 SUCLG2Q96I99 432 aa6.42□□□□□ -1.38
SCARB2-218ENST00000639715 LSG1Q9H089 658 aaKnown RBP6.42□□□□□ -1.38
SCARB2-218ENST00000639715 FAM204AQ9H8W3 233 aa6.42□□□□□ -1.38
SCARB2-218ENST00000639715 FAM169AQ9Y6X4 670 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms