RNA–Protein interactions for RNA: ENST00000639470.1

COLCA2-207, Transcript of colorectal cancer associated 2, humanhuman

TSL 1 (best)

Gene COLCA2, Length 1,207 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA2-207ENST00000639470 TMOD2Q9NZR1 351 aa20.28■□□□□ 0.84
COLCA2-207ENST00000639470 ABCF2Q9UG63 623 aa20.28■□□□□ 0.84
COLCA2-207ENST00000639470 SALL1Q9NSC2 1324 aa20.27■□□□□ 0.84
COLCA2-207ENST00000639470 MANSC4A6NHS7 340 aaPredicted RBP20.27■□□□□ 0.84
COLCA2-207ENST00000639470 ZBTB48P10074 688 aaPredicted RBP20.27■□□□□ 0.84
COLCA2-207ENST00000639470 FTSJ3Q8IY81 847 aaKnown RBP20.27■□□□□ 0.84
COLCA2-207ENST00000639470 OTUD5Q96G74 571 aa20.27■□□□□ 0.84
COLCA2-207ENST00000639470 USP40Q9NVE5 1235 aa20.27■□□□□ 0.84
COLCA2-207ENST00000639470 HMG20BQ9P0W2 317 aa20.27■□□□□ 0.84
COLCA2-207ENST00000639470 SNCAIPQ9Y6H5 919 aa20.27■□□□□ 0.84
COLCA2-207ENST00000639470 MYH13Q9UKX3 1938 aa20.26■□□□□ 0.83
COLCA2-207ENST00000639470 ZBTB7BO15156 539 aaPredicted RBP20.26■□□□□ 0.83
COLCA2-207ENST00000639470 INPP5BP32019 993 aa20.26■□□□□ 0.83
COLCA2-207ENST00000639470 MAP3K9P80192 1104 aa20.26■□□□□ 0.83
COLCA2-207ENST00000639470 CAP1Q01518 475 aa20.26■□□□□ 0.83
COLCA2-207ENST00000639470 CTU1Q7Z7A3 348 aaKnown RBP20.26■□□□□ 0.83
COLCA2-207ENST00000639470 MS4A4AQ96JQ5 239 aa20.26■□□□□ 0.83
COLCA2-207ENST00000639470 WRNIP1Q96S55 665 aa20.26■□□□□ 0.83
COLCA2-207ENST00000639470 SEMA3EO15041 775 aa20.25■□□□□ 0.83
COLCA2-207ENST00000639470 G3BP1Q13283 466 aaKnown RBP eCLIP20.25■□□□□ 0.83
COLCA2-207ENST00000639470 FAM83AQ86UY5 434 aa20.25■□□□□ 0.83
COLCA2-207ENST00000639470 BRI3BPQ8WY22 251 aa20.25■□□□□ 0.83
COLCA2-207ENST00000639470 AKAP2Q9Y2D5 859 aa20.25■□□□□ 0.83
COLCA2-207ENST00000639470 MCAMP43121 646 aa20.24■□□□□ 0.83
COLCA2-207ENST00000639470 ATP8B2P98198 1209 aa20.24■□□□□ 0.83
COLCA2-207ENST00000639470 MVPQ14764 893 aaKnown RBP20.24■□□□□ 0.83
COLCA2-207ENST00000639470 SH3BP5LQ7L8J4 393 aa20.24■□□□□ 0.83
COLCA2-207ENST00000639470 SSH3Q8TE77 659 aa20.24■□□□□ 0.83
COLCA2-207ENST00000639470 DBNDD2Q9BQY9 259 aa20.24■□□□□ 0.83
COLCA2-207ENST00000639470 DDX4Q9NQI0 724 aaKnown RBP20.24■□□□□ 0.83
COLCA2-207ENST00000639470 SNRKQ9NRH2 765 aa20.24■□□□□ 0.83
COLCA2-207ENST00000639470 TLR7Q9NYK1 1049 aaKnown RBP20.24■□□□□ 0.83
COLCA2-207ENST00000639470 GAKO14976 1311 aa20.24■□□□□ 0.83
COLCA2-207ENST00000639470 MECOMQ03112 1051 aa20.23■□□□□ 0.83
COLCA2-207ENST00000639470 CRHR2Q13324 411 aa20.23■□□□□ 0.83
COLCA2-207ENST00000639470 FKBP1CQ5VVH2 108 aa20.23■□□□□ 0.83
COLCA2-207ENST00000639470 DZIP1Q86YF9 867 aaKnown RBP20.23■□□□□ 0.83
COLCA2-207ENST00000639470 FAM151AQ8WW52 585 aa20.23■□□□□ 0.83
COLCA2-207ENST00000639470 SURF6O75683 361 aaKnown RBP20.22■□□□□ 0.83
COLCA2-207ENST00000639470 BTDP43251 543 aa20.22■□□□□ 0.83
COLCA2-207ENST00000639470 RGS3P49796 1198 aa20.22■□□□□ 0.83
COLCA2-207ENST00000639470 SOX10P56693 466 aa20.22■□□□□ 0.83
COLCA2-207ENST00000639470 GORABQ5T7V8 394 aa20.22■□□□□ 0.83
COLCA2-207ENST00000639470 SPATA5Q8NB90 893 aa20.22■□□□□ 0.83
COLCA2-207ENST00000639470 CSADQ9Y600 493 aa20.22■□□□□ 0.83
COLCA2-207ENST00000639470 RFX7Q2KHR2 1363 aa20.21■□□□□ 0.83
COLCA2-207ENST00000639470 RPAP1Q9BWH6 1393 aaPredicted RBP20.21■□□□□ 0.83
COLCA2-207ENST00000639470 FKTNO75072 461 aa20.21■□□□□ 0.83
COLCA2-207ENST00000639470 ARID4AP29374 1257 aaPredicted RBP20.21■□□□□ 0.83
COLCA2-207ENST00000639470 OS9Q13438 667 aaPredicted RBP20.21■□□□□ 0.83
COLCA2-207ENST00000639470 TNNI3KQ59H18 835 aa20.21■□□□□ 0.83
COLCA2-207ENST00000639470 CEP85Q6P2H3 762 aa20.21■□□□□ 0.83
COLCA2-207ENST00000639470 FAM43AQ8N2R8 423 aa20.21■□□□□ 0.83
COLCA2-207ENST00000639470 CFHR5Q9BXR6 569 aa20.21■□□□□ 0.83
COLCA2-207ENST00000639470 FPGT-TNNI3KV9GXZ4 949 aa20.21■□□□□ 0.83
COLCA2-207ENST00000639470 CCL15-CCL14A0A0B4J2E2 113 aa20.2■□□□□ 0.82
COLCA2-207ENST00000639470 TESPA1A2RU30 521 aaPredicted RBP20.2■□□□□ 0.82
COLCA2-207ENST00000639470 SPDYE5A6NIY4 337 aa20.2■□□□□ 0.82
COLCA2-207ENST00000639470 UNCXA6NJT0 531 aa20.2■□□□□ 0.82
COLCA2-207ENST00000639470 WDHD1O75717 1129 aaPredicted RBP20.2■□□□□ 0.82
COLCA2-207ENST00000639470 PICALMQ13492 652 aa20.2■□□□□ 0.82
COLCA2-207ENST00000639470 CCL15Q16663 113 aa20.2■□□□□ 0.82
COLCA2-207ENST00000639470 FRMD4AQ9P2Q2 1039 aaPredicted RBP20.2■□□□□ 0.82
COLCA2-207ENST00000639470 HPS5Q9UPZ3 1129 aa20.2■□□□□ 0.82
COLCA2-207ENST00000639470 ATRNL1Q5VV63 1379 aa20.2■□□□□ 0.82
COLCA2-207ENST00000639470 DDTLA6NHG4 134 aaPredicted RBP20.19■□□□□ 0.82
COLCA2-207ENST00000639470 IRF6O14896 467 aa20.19■□□□□ 0.82
COLCA2-207ENST00000639470 RHBDL3P58872 404 aa20.19■□□□□ 0.82
COLCA2-207ENST00000639470 NDUFB9Q9Y6M9 179 aa20.19■□□□□ 0.82
COLCA2-207ENST00000639470 MROH7-TTC4A0A0A0MT08 1334 aa20.19■□□□□ 0.82
COLCA2-207ENST00000639470 PDS5AQ29RF7 1337 aaKnown RBP20.19■□□□□ 0.82
COLCA2-207ENST00000639470 FAM196BA6NMK8 535 aa20.18■□□□□ 0.82
COLCA2-207ENST00000639470 INHBEP58166 350 aa20.18■□□□□ 0.82
COLCA2-207ENST00000639470 ERICH6Q7L0X2 663 aa20.18■□□□□ 0.82
COLCA2-207ENST00000639470 ZGPATQ8N5A5 531 aaKnown RBP20.18■□□□□ 0.82
COLCA2-207ENST00000639470 CD99L2Q8TCZ2 262 aa20.18■□□□□ 0.82
COLCA2-207ENST00000639470 ZNF341Q9BYN7 854 aa20.18■□□□□ 0.82
COLCA2-207ENST00000639470 CCDC8Q9H0W5 538 aaPredicted RBP20.18■□□□□ 0.82
COLCA2-207ENST00000639470 DBNLQ9UJU6 430 aaKnown RBP20.18■□□□□ 0.82
COLCA2-207ENST00000639470 EXOC6BQ9Y2D4 811 aa20.18■□□□□ 0.82
COLCA2-207ENST00000639470 ZBTB22O15209 634 aa20.17■□□□□ 0.82
COLCA2-207ENST00000639470 ECM2O94769 699 aaPredicted RBP20.17■□□□□ 0.82
COLCA2-207ENST00000639470 ALDH1A1P00352 501 aa20.17■□□□□ 0.82
COLCA2-207ENST00000639470 CCDC84Q86UT8 332 aaPredicted RBP20.17■□□□□ 0.82
COLCA2-207ENST00000639470 NSUN4Q96CB9 384 aaKnown RBP20.17■□□□□ 0.82
COLCA2-207ENST00000639470 RAI14Q9P0K7 980 aa20.17■□□□□ 0.82
COLCA2-207ENST00000639470 COG6Q9Y2V7 657 aa20.17■□□□□ 0.82
COLCA2-207ENST00000639470 BTBD19C9JJ37 291 aa20.16■□□□□ 0.82
COLCA2-207ENST00000639470 NOM1Q5C9Z4 860 aaKnown RBP20.16■□□□□ 0.82
COLCA2-207ENST00000639470 TTC39AQ5SRH9 613 aa20.16■□□□□ 0.82
COLCA2-207ENST00000639470 C20orf194Q5TEA3 1177 aa20.16■□□□□ 0.82
COLCA2-207ENST00000639470 DCAF15Q66K64 600 aa20.16■□□□□ 0.82
COLCA2-207ENST00000639470 ERO1BQ86YB8 467 aa20.16■□□□□ 0.82
COLCA2-207ENST00000639470 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.16■□□□□ 0.82
COLCA2-207ENST00000639470 EAF2Q96CJ1 260 aaPredicted RBP20.16■□□□□ 0.82
COLCA2-207ENST00000639470 FAM163AQ96GL9 167 aaPredicted RBP20.16■□□□□ 0.82
COLCA2-207ENST00000639470 IDI2Q9BXS1 227 aa20.16■□□□□ 0.82
COLCA2-207ENST00000639470 ZNF112Q9UJU3 913 aa20.16■□□□□ 0.82
COLCA2-207ENST00000639470 NOP58Q9Y2X3 529 aaKnown RBP20.16■□□□□ 0.82
COLCA2-207ENST00000639470 LAMB1P07942 1786 aa20.16■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms