RNA–Protein interactions for RNA: ENST00000639004.1

FAM49B-230, Transcript of family with sequence similarity 49 member B, humanhuman

TSL 5 BASIC

Gene FAM49B, Length 837 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49B-230ENST00000639004 WISP1O95388 367 aa9.89□□□□□ -0.83
FAM49B-230ENST00000639004 DLGAP3O95886 979 aa9.89□□□□□ -0.83
FAM49B-230ENST00000639004 ELNP15502 786 aa9.89□□□□□ -0.83
FAM49B-230ENST00000639004 SEPT6Q14141 434 aa9.89□□□□□ -0.83
FAM49B-230ENST00000639004 NAALADL2Q58DX5 795 aa9.89□□□□□ -0.83
FAM49B-230ENST00000639004 PRRT3Q5FWE3 981 aa9.89□□□□□ -0.83
FAM49B-230ENST00000639004 SNAP47Q5SQN1 464 aa9.89□□□□□ -0.83
FAM49B-230ENST00000639004 KIAA0825Q8IV33 1275 aa9.89□□□□□ -0.83
FAM49B-230ENST00000639004 ZNF296Q8WUU4 475 aaPredicted RBP9.89□□□□□ -0.83
FAM49B-230ENST00000639004 TINF2Q9BSI4 451 aa9.89□□□□□ -0.83
FAM49B-230ENST00000639004 CCDC86Q9H6F5 360 aaKnown RBP9.89□□□□□ -0.83
FAM49B-230ENST00000639004 PAK2Q13177 524 aa9.88□□□□□ -0.83
FAM49B-230ENST00000639004 SCARA3Q6AZY7 606 aa9.88□□□□□ -0.83
FAM49B-230ENST00000639004 GOLM1Q8NBJ4 401 aa9.88□□□□□ -0.83
FAM49B-230ENST00000639004 SCARF2Q96GP6 870 aaPredicted RBP9.88□□□□□ -0.83
FAM49B-230ENST00000639004 MIR1-1HGQ9H1L0 117 aa9.88□□□□□ -0.83
FAM49B-230ENST00000639004 CAPN10Q9HC96 672 aa9.88□□□□□ -0.83
FAM49B-230ENST00000639004 KRT82Q9NSB4 513 aa9.88□□□□□ -0.83
FAM49B-230ENST00000639004 ZNF862O60290 1169 aa9.87□□□□□ -0.83
FAM49B-230ENST00000639004 GREM1O60565 184 aa9.87□□□□□ -0.83
FAM49B-230ENST00000639004 COL8A1P27658 744 aa9.87□□□□□ -0.83
FAM49B-230ENST00000639004 PTPN11Q06124 597 aaPredicted RBP9.87□□□□□ -0.83
FAM49B-230ENST00000639004 PDE3AQ14432 1141 aa9.87□□□□□ -0.83
FAM49B-230ENST00000639004 DUOXA2Q1HG44 320 aa9.87□□□□□ -0.83
FAM49B-230ENST00000639004 IGF2-ASQ6U949 168 aa9.87□□□□□ -0.83
FAM49B-230ENST00000639004 BNC2Q6ZN30 1099 aaPredicted RBP9.87□□□□□ -0.83
FAM49B-230ENST00000639004 CCDC84Q86UT8 332 aaPredicted RBP9.87□□□□□ -0.83
FAM49B-230ENST00000639004 GPBAR1Q8TDU6 330 aa9.87□□□□□ -0.83
FAM49B-230ENST00000639004 INPP5FQ9Y2H2 1132 aa9.87□□□□□ -0.83
FAM49B-230ENST00000639004 SUPT16HQ9Y5B9 1047 aaKnown RBP9.87□□□□□ -0.83
FAM49B-230ENST00000639004 F13A1P00488 732 aa9.86□□□□□ -0.83
FAM49B-230ENST00000639004 GRIK4Q16099 956 aa9.86□□□□□ -0.83
FAM49B-230ENST00000639004 JARID2Q92833 1246 aaPredicted RBP9.86□□□□□ -0.83
FAM49B-230ENST00000639004 EAF1Q96JC9 268 aaPredicted RBP9.86□□□□□ -0.83
FAM49B-230ENST00000639004 SPATA31C1P0DKV0 1188 aa9.85□□□□□ -0.83
FAM49B-230ENST00000639004 LIG1P18858 919 aa9.85□□□□□ -0.83
FAM49B-230ENST00000639004 GJA8P48165 433 aa9.85□□□□□ -0.83
FAM49B-230ENST00000639004 SHISA2Q6UWI4 295 aa9.85□□□□□ -0.83
FAM49B-230ENST00000639004 FAM196AQ6ZSG2 479 aa9.85□□□□□ -0.83
FAM49B-230ENST00000639004 KIAA1211Q6ZU35 1233 aa9.85□□□□□ -0.83
FAM49B-230ENST00000639004 GATAD2BQ8WXI9 593 aa9.85□□□□□ -0.83
FAM49B-230ENST00000639004 WDR89Q96FK6 387 aaPredicted RBP9.85□□□□□ -0.83
FAM49B-230ENST00000639004 NT5C1AQ9BXI3 368 aa9.85□□□□□ -0.83
FAM49B-230ENST00000639004 FAM221AA4D161 298 aa9.84□□□□□ -0.83
FAM49B-230ENST00000639004 HP1BP3Q5SSJ5 553 aaPredicted RBP9.84□□□□□ -0.83
FAM49B-230ENST00000639004 ACAD11Q709F0 780 aa9.84□□□□□ -0.83
FAM49B-230ENST00000639004 ZC3HAV1Q7Z2W4 902 aaKnown RBP9.84□□□□□ -0.83
FAM49B-230ENST00000639004 GPRASP2Q96D09 838 aa9.84□□□□□ -0.83
FAM49B-230ENST00000639004 ACSBG1Q96GR2 724 aa9.84□□□□□ -0.83
FAM49B-230ENST00000639004 RUSC1Q9BVN2 902 aa9.84□□□□□ -0.83
FAM49B-230ENST00000639004 MRPL18Q9H0U6 180 aaKnown RBP9.84□□□□□ -0.83
FAM49B-230ENST00000639004 UBP1Q9NZI7 540 aa9.84□□□□□ -0.83
FAM49B-230ENST00000639004 CILPO75339 1184 aa9.83□□□□□ -0.84
FAM49B-230ENST00000639004 SELPP16109 830 aa9.83□□□□□ -0.84
FAM49B-230ENST00000639004 KIF4BQ2VIQ3 1234 aa9.83□□□□□ -0.84
FAM49B-230ENST00000639004 EXOSC6Q5RKV6 272 aaKnown RBP9.83□□□□□ -0.84
FAM49B-230ENST00000639004 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.83□□□□□ -0.84
FAM49B-230ENST00000639004 SLC43A3Q8NBI5 491 aa9.83□□□□□ -0.84
FAM49B-230ENST00000639004 WDR18Q9BV38 432 aa9.83□□□□□ -0.84
FAM49B-230ENST00000639004 TMPRSS13Q9BYE2 586 aa9.83□□□□□ -0.84
FAM49B-230ENST00000639004 MEGF11A6BM72 1044 aa9.82□□□□□ -0.84
FAM49B-230ENST00000639004 AOC2O75106 756 aa9.82□□□□□ -0.84
FAM49B-230ENST00000639004 CRKP46108 304 aa9.82□□□□□ -0.84
FAM49B-230ENST00000639004 GNL2Q13823 731 aaKnown RBP9.82□□□□□ -0.84
FAM49B-230ENST00000639004 FBXO27Q8NI29 283 aa9.82□□□□□ -0.84
FAM49B-230ENST00000639004 RASGRP4Q8TDF6 673 aa9.82□□□□□ -0.84
FAM49B-230ENST00000639004 PCDHA4Q9UN74 947 aa9.82□□□□□ -0.84
FAM49B-230ENST00000639004 ROBO2Q9HCK4 1378 aa9.81□□□□□ -0.84
FAM49B-230ENST00000639004 FAM181BA6NEQ2 426 aa9.81□□□□□ -0.84
FAM49B-230ENST00000639004 HNRNPUQ00839 825 aaKnown RBP eCLIP9.81□□□□□ -0.84
FAM49B-230ENST00000639004 LRRC3Q9BY71 257 aa9.81□□□□□ -0.84
FAM49B-230ENST00000639004 PCDHGC5Q9Y5F6 944 aa9.81□□□□□ -0.84
FAM49B-230ENST00000639004 F8W735 103 aaPredicted RBP9.8□□□□□ -0.84
FAM49B-230ENST00000639004 TLR3O15455 904 aaKnown RBP9.8□□□□□ -0.84
FAM49B-230ENST00000639004 CDK8P49336 464 aa9.8□□□□□ -0.84
FAM49B-230ENST00000639004 APOBRQ0VD83 1088 aa9.8□□□□□ -0.84
FAM49B-230ENST00000639004 MPP2Q14168 576 aa9.8□□□□□ -0.84
FAM49B-230ENST00000639004 TMEM130Q8N3G9 435 aa9.8□□□□□ -0.84
FAM49B-230ENST00000639004 LENG1Q96BZ8 264 aaPredicted RBP9.8□□□□□ -0.84
FAM49B-230ENST00000639004 RNF208Q9H0X6 261 aa9.8□□□□□ -0.84
FAM49B-230ENST00000639004 SYNGAP1Q96PV0 1343 aa9.8□□□□□ -0.84
FAM49B-230ENST00000639004 RPL6Q02878 288 aaKnown RBP9.79□□□□□ -0.84
FAM49B-230ENST00000639004 INPP5AQ14642 412 aa9.79□□□□□ -0.84
FAM49B-230ENST00000639004 AGGF1Q8N302 714 aaeCLIP9.79□□□□□ -0.84
FAM49B-230ENST00000639004 NKD1Q969G9 470 aa9.79□□□□□ -0.84
FAM49B-230ENST00000639004 RAD18Q9NS91 495 aa9.79□□□□□ -0.84
FAM49B-230ENST00000639004 BPNT1O95861 308 aa9.78□□□□□ -0.84
FAM49B-230ENST00000639004 NUTM2GQ5VZR2 741 aa9.78□□□□□ -0.84
FAM49B-230ENST00000639004 DIEXFQ68CQ4 756 aaKnown RBP9.78□□□□□ -0.84
FAM49B-230ENST00000639004 LRFN4Q6PJG9 635 aa9.78□□□□□ -0.84
FAM49B-230ENST00000639004 SLITRK4Q8IW52 837 aa9.78□□□□□ -0.84
FAM49B-230ENST00000639004 SMG8Q8ND04 991 aaKnown RBP9.78□□□□□ -0.84
FAM49B-230ENST00000639004 PLPPR2Q96GM1 343 aa9.78□□□□□ -0.84
FAM49B-230ENST00000639004 SUGCTQ9HAC7 445 aa9.78□□□□□ -0.84
FAM49B-230ENST00000639004 USP21Q9UK80 565 aa9.78□□□□□ -0.84
FAM49B-230ENST00000639004 C9orf172C9J069 976 aa9.77□□□□□ -0.85
FAM49B-230ENST00000639004 TMPRSS2O15393 492 aa9.77□□□□□ -0.85
FAM49B-230ENST00000639004 ALX3O95076 343 aa9.77□□□□□ -0.85
FAM49B-230ENST00000639004 APBA3O96018 575 aa9.77□□□□□ -0.85
FAM49B-230ENST00000639004 SLFN14P0C7P3 912 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms