RNA–Protein interactions for RNA: ENST00000637276.1

CACNA1A-238, Transcript of calcium voltage-gated channel subunit alpha1 A, human

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 7,135 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNA1A-238	ENST00000637276	KIF21B	O75037	1637 aa		18.34	■□□□□ 0.53
CACNA1A-238	ENST00000637276	STX10	O60499	249 aa		18.34	■□□□□ 0.53
CACNA1A-238	ENST00000637276	ATP6V1E1	P36543	226 aa		18.34	■□□□□ 0.53
CACNA1A-238	ENST00000637276	CASQ2	O14958	399 aa	Predicted RBP	18.33	■□□□□ 0.53
CACNA1A-238	ENST00000637276	SLC8A3	P57103	927 aa		18.33	■□□□□ 0.53
CACNA1A-238	ENST00000637276	BEND3	Q5T5X7	828 aa		18.33	■□□□□ 0.53
CACNA1A-238	ENST00000637276	UTP14C	Q5TAP6	766 aa	Known RBP	18.33	■□□□□ 0.53
CACNA1A-238	ENST00000637276	MYSM1	Q5VVJ2	828 aa		18.33	■□□□□ 0.53
CACNA1A-238	ENST00000637276	GOLGA6L9	A6NEM1	432 aa		18.33	■□□□□ 0.53
CACNA1A-238	ENST00000637276	GANC	Q8TET4	914 aa		18.33	■□□□□ 0.53
CACNA1A-238	ENST00000637276	TSR3	Q9UJK0	312 aa	Known RBP	18.33	■□□□□ 0.53
CACNA1A-238	ENST00000637276	BRF1	Q92994	677 aa		18.33	■□□□□ 0.53
CACNA1A-238	ENST00000637276	SYNDIG1	Q9H7V2	258 aa		18.33	■□□□□ 0.53
CACNA1A-238	ENST00000637276	LETM2	Q2VYF4	491 aa		18.33	■□□□□ 0.52
CACNA1A-238	ENST00000637276	MYLK4	Q86YV6	388 aa	Predicted RBP	18.33	■□□□□ 0.52
CACNA1A-238	ENST00000637276	GSTO1	P78417	241 aa		18.33	■□□□□ 0.52
CACNA1A-238	ENST00000637276	CCDC61	Q9Y6R9	512 aa		18.33	■□□□□ 0.52
CACNA1A-238	ENST00000637276	PCK1	P35558	622 aa		18.33	■□□□□ 0.52
CACNA1A-238	ENST00000637276	NCAPH2	Q6IBW4	605 aa		18.33	■□□□□ 0.52
CACNA1A-238	ENST00000637276	TACO1	Q9BSH4	297 aa	Known RBP	18.33	■□□□□ 0.52
CACNA1A-238	ENST00000637276	ST7	Q9NRC1	585 aa		18.33	■□□□□ 0.52
CACNA1A-238	ENST00000637276	DDX19A	Q9NUU7	478 aa	Known RBP	18.33	■□□□□ 0.52
CACNA1A-238	ENST00000637276		A0A1B0GUL7	405 aa		18.32	■□□□□ 0.52
CACNA1A-238	ENST00000637276	NEDD9	Q14511	834 aa		18.32	■□□□□ 0.52
CACNA1A-238	ENST00000637276	PLCB4	Q15147	1175 aa		18.32	■□□□□ 0.52
CACNA1A-238	ENST00000637276	POTEB2	H3BUK9	544 aa		18.32	■□□□□ 0.52
CACNA1A-238	ENST00000637276	ANO4	Q32M45	955 aa		18.32	■□□□□ 0.52
CACNA1A-238	ENST00000637276	SEL1L2	Q5TEA6	688 aa		18.32	■□□□□ 0.52
CACNA1A-238	ENST00000637276	ZBTB43	O43298	467 aa		18.32	■□□□□ 0.52
CACNA1A-238	ENST00000637276	IGHD	P01880	384 aa		18.32	■□□□□ 0.52
CACNA1A-238	ENST00000637276	ZNF467	Q7Z7K2	595 aa	Predicted RBP	18.32	■□□□□ 0.52
CACNA1A-238	ENST00000637276	TMCO5A	Q8N6Q1	288 aa		18.32	■□□□□ 0.52
CACNA1A-238	ENST00000637276	SYT1	P21579	422 aa		18.32	■□□□□ 0.52
CACNA1A-238	ENST00000637276	LDHC	P07864	332 aa		18.31	■□□□□ 0.52
CACNA1A-238	ENST00000637276	CAPN2	P17655	700 aa		18.31	■□□□□ 0.52
CACNA1A-238	ENST00000637276	RBBP5	Q15291	538 aa	Known RBP	18.31	■□□□□ 0.52
CACNA1A-238	ENST00000637276	CLUL1	Q15846	466 aa		18.31	■□□□□ 0.52
CACNA1A-238	ENST00000637276	WDR66	Q8TBY9	1149 aa		18.31	■□□□□ 0.52
CACNA1A-238	ENST00000637276	WDR97	A6NE52	1622 aa		18.31	■□□□□ 0.52
CACNA1A-238	ENST00000637276	CTAGE9	A4FU28	777 aa		18.31	■□□□□ 0.52
CACNA1A-238	ENST00000637276	SKIL	P12757	684 aa		18.31	■□□□□ 0.52
CACNA1A-238	ENST00000637276	SZRD1	Q7Z422	152 aa		18.31	■□□□□ 0.52
CACNA1A-238	ENST00000637276	KCNH5	Q8NCM2	988 aa		18.31	■□□□□ 0.52
CACNA1A-238	ENST00000637276	IVNS1ABP	Q9Y6Y0	642 aa		18.31	■□□□□ 0.52
CACNA1A-238	ENST00000637276	CYLC1	P35663	651 aa	Predicted RBP	18.31	■□□□□ 0.52
CACNA1A-238	ENST00000637276	SKIV2L	Q15477	1246 aa	Known RBP	18.31	■□□□□ 0.52
CACNA1A-238	ENST00000637276	CCDC186	Q7Z3E2	898 aa		18.31	■□□□□ 0.52
CACNA1A-238	ENST00000637276	CTAGE15	A4D2H0	777 aa		18.31	■□□□□ 0.52
CACNA1A-238	ENST00000637276	CTAGE8	P0CG41	777 aa		18.31	■□□□□ 0.52
CACNA1A-238	ENST00000637276	DNM1	Q05193	864 aa	Known RBP	18.31	■□□□□ 0.52
CACNA1A-238	ENST00000637276	RPS6KA2	Q15349	733 aa		18.31	■□□□□ 0.52
CACNA1A-238	ENST00000637276	CTAGE6	Q86UF2	777 aa		18.31	■□□□□ 0.52
CACNA1A-238	ENST00000637276	CTAGE4	Q8IX94	777 aa		18.31	■□□□□ 0.52
CACNA1A-238	ENST00000637276	TBC1D8	O95759	1140 aa		18.31	■□□□□ 0.52
CACNA1A-238	ENST00000637276	LRRC9	Q6ZRR7	1453 aa		18.31	■□□□□ 0.52
CACNA1A-238	ENST00000637276	PRPF6	O94906	941 aa	Known RBP	18.3	■□□□□ 0.52
CACNA1A-238	ENST00000637276	SPECC1L-ADORA2A	F8WAN1	911 aa		18.3	■□□□□ 0.52
CACNA1A-238	ENST00000637276	KRT28	Q7Z3Y7	464 aa		18.3	■□□□□ 0.52
CACNA1A-238	ENST00000637276	ZNF804A	Q7Z570	1209 aa		18.3	■□□□□ 0.52
CACNA1A-238	ENST00000637276	PDZD8	Q8NEN9	1154 aa		18.3	■□□□□ 0.52
CACNA1A-238	ENST00000637276	NSMCE1	Q8WV22	266 aa		18.3	■□□□□ 0.52
CACNA1A-238	ENST00000637276	MTR	Q99707	1265 aa		18.3	■□□□□ 0.52
CACNA1A-238	ENST00000637276	ZC3H12C	Q9C0D7	883 aa	Known RBP	18.3	■□□□□ 0.52
CACNA1A-238	ENST00000637276	STRN3	Q13033	797 aa		18.3	■□□□□ 0.52
CACNA1A-238	ENST00000637276	ADAT2	Q7Z6V5	191 aa	Known RBP	18.3	■□□□□ 0.52
CACNA1A-238	ENST00000637276	USP37	Q86T82	979 aa		18.3	■□□□□ 0.52
CACNA1A-238	ENST00000637276	DDX21	Q9NR30	783 aa	Known RBP eCLIP	18.3	■□□□□ 0.52
CACNA1A-238	ENST00000637276	STIM2	Q9P246	746 aa		18.3	■□□□□ 0.52
CACNA1A-238	ENST00000637276	TRIM27	P14373	513 aa		18.3	■□□□□ 0.52
CACNA1A-238	ENST00000637276	SPDL1	Q96EA4	605 aa		18.3	■□□□□ 0.52
CACNA1A-238	ENST00000637276	USH1C	Q9Y6N9	552 aa		18.3	■□□□□ 0.52
CACNA1A-238	ENST00000637276	SESN3	P58005	492 aa		18.3	■□□□□ 0.52
CACNA1A-238	ENST00000637276	TRIM68	Q6AZZ1	485 aa		18.3	■□□□□ 0.52
CACNA1A-238	ENST00000637276	KIAA1524	Q8TCG1	905 aa		18.3	■□□□□ 0.52
CACNA1A-238	ENST00000637276	PA2G4	Q9UQ80	394 aa	Known RBP	18.3	■□□□□ 0.52
CACNA1A-238	ENST00000637276	FRMD3	A2A2Y4	597 aa		18.29	■□□□□ 0.52
CACNA1A-238	ENST00000637276	VWA3A	A6NCI4	1184 aa		18.29	■□□□□ 0.52
CACNA1A-238	ENST00000637276	GADL1	Q6ZQY3	521 aa		18.29	■□□□□ 0.52
CACNA1A-238	ENST00000637276	MMS19	Q96T76	1030 aa		18.29	■□□□□ 0.52
CACNA1A-238	ENST00000637276		M0QZ92	97 aa		18.29	■□□□□ 0.52
CACNA1A-238	ENST00000637276	UBE2H	P62256	183 aa		18.29	■□□□□ 0.52
CACNA1A-238	ENST00000637276	MCU	Q8NE86	351 aa		18.29	■□□□□ 0.52
CACNA1A-238	ENST00000637276	SAMD15	Q9P1V8	674 aa		18.29	■□□□□ 0.52
CACNA1A-238	ENST00000637276	UCHL5	Q9Y5K5	329 aa	Known RBP eCLIP	18.29	■□□□□ 0.52
CACNA1A-238	ENST00000637276	IFT74	Q96LB3	600 aa		18.28	■□□□□ 0.52
CACNA1A-238	ENST00000637276	CHPF2	Q9P2E5	772 aa		18.28	■□□□□ 0.52
CACNA1A-238	ENST00000637276	hCG_1642624	A0A1W2PR95	340 aa		18.28	■□□□□ 0.52
CACNA1A-238	ENST00000637276	ZFY	P08048	801 aa	Predicted RBP	18.28	■□□□□ 0.52
CACNA1A-238	ENST00000637276	SPDYE1	Q8NFV5	336 aa	Predicted RBP	18.28	■□□□□ 0.52
CACNA1A-238	ENST00000637276	UBN2	Q6ZU65	1347 aa		18.28	■□□□□ 0.52
CACNA1A-238	ENST00000637276	TACC1	O75410	805 aa		18.28	■□□□□ 0.52
CACNA1A-238	ENST00000637276	MCM5	P33992	734 aa		18.28	■□□□□ 0.52
CACNA1A-238	ENST00000637276	BAG2	O95816	211 aa		18.28	■□□□□ 0.52
CACNA1A-238	ENST00000637276	GSTA1	P08263	222 aa		18.28	■□□□□ 0.52
CACNA1A-238	ENST00000637276	GSTA2	P09210	222 aa		18.28	■□□□□ 0.52
CACNA1A-238	ENST00000637276	APOBR	Q0VD83	1088 aa		18.28	■□□□□ 0.52
CACNA1A-238	ENST00000637276	AMOT	Q4VCS5	1084 aa		18.28	■□□□□ 0.52
CACNA1A-238	ENST00000637276	NUCKS1	Q9H1E3	243 aa	Known RBP	18.28	■□□□□ 0.52
CACNA1A-238	ENST00000637276	FGD5	Q6ZNL6	1462 aa		18.28	■□□□□ 0.52
CACNA1A-238	ENST00000637276	DBF4	Q9UBU7	674 aa	Predicted RBP	18.28	■□□□□ 0.52

Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms