RNA–Protein interactions for RNA: ENST00000628696.2

SMN2-215, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN2, Length 885 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-215ENST00000628696 CEP126Q9P2H0 1117 aa23.67■■□□□ 1.38
SMN2-215ENST00000628696 PTCH2Q9Y6C5 1203 aa23.67■■□□□ 1.38
SMN2-215ENST00000628696 BTBD19C9JJ37 291 aa23.66■■□□□ 1.38
SMN2-215ENST00000628696 PPIL2Q13356 520 aa23.66■■□□□ 1.38
SMN2-215ENST00000628696 DIXDC1Q155Q3 683 aa23.66■■□□□ 1.38
SMN2-215ENST00000628696 ATP2B3Q16720 1220 aa23.66■■□□□ 1.38
SMN2-215ENST00000628696 GNL3LQ9NVN8 582 aaKnown RBP23.66■■□□□ 1.38
SMN2-215ENST00000628696 HTTP42858 3142 aa23.66■■□□□ 1.38
SMN2-215ENST00000628696 RBBP6Q7Z6E9 1792 aaKnown RBP23.65■■□□□ 1.38
SMN2-215ENST00000628696 INPP5BP32019 993 aa23.65■■□□□ 1.38
SMN2-215ENST00000628696 KIF22Q14807 665 aa23.65■■□□□ 1.38
SMN2-215ENST00000628696 SLC9C1Q4G0N8 1177 aa23.65■■□□□ 1.38
SMN2-215ENST00000628696 NBPF11Q86T75 865 aa23.65■■□□□ 1.38
SMN2-215ENST00000628696 FAM151AQ8WW52 585 aa23.65■■□□□ 1.38
SMN2-215ENST00000628696 PCDH10Q9P2E7 1040 aa23.65■■□□□ 1.38
SMN2-215ENST00000628696 DAGLAQ9Y4D2 1042 aa23.65■■□□□ 1.38
SMN2-215ENST00000628696 TLR2O60603 784 aa23.64■■□□□ 1.37
SMN2-215ENST00000628696 ECM2O94769 699 aaPredicted RBP23.64■■□□□ 1.37
SMN2-215ENST00000628696 LDHBP07195 334 aaKnown RBP23.64■■□□□ 1.37
SMN2-215ENST00000628696 PRDX5P30044 214 aa23.64■■□□□ 1.37
SMN2-215ENST00000628696 CDC42EP5Q6NZY7 148 aa23.64■■□□□ 1.37
SMN2-215ENST00000628696 RPAP1Q9BWH6 1393 aaPredicted RBP23.64■■□□□ 1.37
SMN2-215ENST00000628696 CIAO1O76071 339 aa23.63■■□□□ 1.37
SMN2-215ENST00000628696 MYCP01106 439 aaPredicted RBP23.63■■□□□ 1.37
SMN2-215ENST00000628696 PPATQ06203 517 aa23.63■■□□□ 1.37
SMN2-215ENST00000628696 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.63■■□□□ 1.37
SMN2-215ENST00000628696 ZNF333Q96JL9 665 aa23.63■■□□□ 1.37
SMN2-215ENST00000628696 ARHGAP39Q9C0H5 1083 aa23.63■■□□□ 1.37
SMN2-215ENST00000628696 USP40Q9NVE5 1235 aa23.63■■□□□ 1.37
SMN2-215ENST00000628696 NOB1Q9ULX3 412 aaKnown RBP23.63■■□□□ 1.37
SMN2-215ENST00000628696 CENPFP49454 3210 aa23.63■■□□□ 1.37
SMN2-215ENST00000628696 ZSWIM8A7E2V4 1837 aa23.62■■□□□ 1.37
SMN2-215ENST00000628696 NFIAQ12857 509 aa23.62■■□□□ 1.37
SMN2-215ENST00000628696 SLC4A8Q2Y0W8 1093 aa23.62■■□□□ 1.37
SMN2-215ENST00000628696 ZCCHC17Q9NP64 241 aaKnown RBP23.62■■□□□ 1.37
SMN2-215ENST00000628696 FBXO3Q9UK99 471 aa23.62■■□□□ 1.37
SMN2-215ENST00000628696 LRRFIP2Q9Y608 721 aaKnown RBP23.62■■□□□ 1.37
SMN2-215ENST00000628696 GCC1Q96CN9 775 aa23.61■■□□□ 1.37
SMN2-215ENST00000628696 DENND2AQ9ULE3 1009 aa23.61■■□□□ 1.37
SMN2-215ENST00000628696 PA2G4Q9UQ80 394 aaKnown RBP23.61■■□□□ 1.37
SMN2-215ENST00000628696 PHKA1P46020 1223 aa23.6■■□□□ 1.37
SMN2-215ENST00000628696 LACTBP83111 547 aaPredicted RBP23.6■■□□□ 1.37
SMN2-215ENST00000628696 API5Q9BZZ5 524 aaKnown RBP23.6■■□□□ 1.37
SMN2-215ENST00000628696 HDAC5Q9UQL6 1122 aa23.6■■□□□ 1.37
SMN2-215ENST00000628696 MYH2Q9UKX2 1941 aa23.59■■□□□ 1.37
SMN2-215ENST00000628696 IL15P40933 162 aaPredicted RBP23.59■■□□□ 1.37
SMN2-215ENST00000628696 FAM198AQ9UFP1 575 aa23.59■■□□□ 1.37
SMN2-215ENST00000628696 CPA4Q9UI42 421 aa23.59■■□□□ 1.37
SMN2-215ENST00000628696 ZNF112Q9UJU3 913 aa23.59■■□□□ 1.37
SMN2-215ENST00000628696 ADORA1P30542 326 aa23.58■■□□□ 1.37
SMN2-215ENST00000628696 ZFPM1Q8IX07 1006 aa23.58■■□□□ 1.37
SMN2-215ENST00000628696 TRMT2AQ8IZ69 625 aaKnown RBP23.58■■□□□ 1.37
SMN2-215ENST00000628696 SH3TC2Q8TF17 1288 aa23.58■■□□□ 1.37
SMN2-215ENST00000628696 PDHXO00330 501 aa23.57■■□□□ 1.36
SMN2-215ENST00000628696 SEMA3EO15041 775 aa23.57■■□□□ 1.36
SMN2-215ENST00000628696 ANKRD23Q86SG2 305 aa23.57■■□□□ 1.36
SMN2-215ENST00000628696 SALL1Q9NSC2 1324 aa23.57■■□□□ 1.36
SMN2-215ENST00000628696 CT47B1P0C2W7 299 aaPredicted RBP23.56■■□□□ 1.36
SMN2-215ENST00000628696 C17orf99Q6UX52 265 aa23.56■■□□□ 1.36
SMN2-215ENST00000628696 MEIS3Q99687 375 aa23.56■■□□□ 1.36
SMN2-215ENST00000628696 KCNH4Q9UQ05 1017 aa23.56■■□□□ 1.36
SMN2-215ENST00000628696 MKI67P46013 3256 aaKnown RBP23.55■■□□□ 1.36
SMN2-215ENST00000628696 GNRH1P01148 92 aa23.55■■□□□ 1.36
SMN2-215ENST00000628696 TIMM10P62072 90 aa23.55■■□□□ 1.36
SMN2-215ENST00000628696 CCDC102BQ68D86 513 aa23.55■■□□□ 1.36
SMN2-215ENST00000628696 ZGPATQ8N5A5 531 aaKnown RBP23.55■■□□□ 1.36
SMN2-215ENST00000628696 COPRSQ9NQ92 184 aa23.55■■□□□ 1.36
SMN2-215ENST00000628696 ABCF2Q9UG63 623 aa23.55■■□□□ 1.36
SMN2-215ENST00000628696 PSMC4P43686 418 aa23.54■■□□□ 1.36
SMN2-215ENST00000628696 RGS3P49796 1198 aa23.54■■□□□ 1.36
SMN2-215ENST00000628696 PRMT2P55345 433 aa23.54■■□□□ 1.36
SMN2-215ENST00000628696 NOL9Q5SY16 702 aaKnown RBP23.54■■□□□ 1.36
SMN2-215ENST00000628696 DZIP1Q86YF9 867 aaKnown RBP23.54■■□□□ 1.36
SMN2-215ENST00000628696 ZSCAN29Q8IWY8 852 aaPredicted RBP23.54■■□□□ 1.36
SMN2-215ENST00000628696 FMNL1O95466 1100 aaPredicted RBP23.53■■□□□ 1.36
SMN2-215ENST00000628696 DOCK2Q92608 1830 aa23.52■■□□□ 1.36
SMN2-215ENST00000628696 CTGFP29279 349 aa23.52■■□□□ 1.36
SMN2-215ENST00000628696 HABP4Q5JVS0 413 aaKnown RBP23.52■■□□□ 1.36
SMN2-215ENST00000628696 TRIM47Q96LD4 638 aa23.52■■□□□ 1.36
SMN2-215ENST00000628696 CXCL11O14625 94 aa23.51■■□□□ 1.35
SMN2-215ENST00000628696 ENTPD3O75355 529 aa23.51■■□□□ 1.35
SMN2-215ENST00000628696 HOXD10P28358 340 aa23.51■■□□□ 1.35
SMN2-215ENST00000628696 MOGSQ13724 837 aa23.51■■□□□ 1.35
SMN2-215ENST00000628696 RASGRF1Q13972 1273 aa23.51■■□□□ 1.35
SMN2-215ENST00000628696 SLF2Q8IX21 1173 aa23.51■■□□□ 1.35
SMN2-215ENST00000628696 IDI2Q9BXS1 227 aa23.51■■□□□ 1.35
SMN2-215ENST00000628696 PICK1Q9NRD5 415 aa23.51■■□□□ 1.35
SMN2-215ENST00000628696 SRRDQ9UH36 339 aa23.51■■□□□ 1.35
SMN2-215ENST00000628696 ZHX2Q9Y6X8 837 aa23.51■■□□□ 1.35
SMN2-215ENST00000628696 BRCA2P51587 3418 aa23.5■■□□□ 1.35
SMN2-215ENST00000628696 A0A1B0GUL7 405 aa23.5■■□□□ 1.35
SMN2-215ENST00000628696 SRGAP3O43295 1099 aa23.5■■□□□ 1.35
SMN2-215ENST00000628696 RARSP54136 660 aaKnown RBP23.5■■□□□ 1.35
SMN2-215ENST00000628696 TFCP2Q12800 502 aa23.5■■□□□ 1.35
SMN2-215ENST00000628696 PICALMQ13492 652 aa23.5■■□□□ 1.35
SMN2-215ENST00000628696 SPTY2D1Q68D10 685 aaPredicted RBP23.5■■□□□ 1.35
SMN2-215ENST00000628696 RAET1EQ8TD07 263 aa23.5■■□□□ 1.35
SMN2-215ENST00000628696 XAGE2Q96GT9 111 aa23.5■■□□□ 1.35
SMN2-215ENST00000628696 PARK7Q99497 189 aaKnown RBP23.5■■□□□ 1.35
SMN2-215ENST00000628696 AKAP2Q9Y2D5 859 aa23.5■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 248.6 ms