RNA–Protein interactions for RNA: ENST00000627490.2

PBX1-222, Transcript of PBX homeobox 1, humanhuman

TSL 2 BASIC

Gene PBX1, Length 1,769 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-222ENST00000627490 NLGN1Q8N2Q7 840 aa23.48■■□□□ 1.35
PBX1-222ENST00000627490 APPBP2Q92624 585 aa23.48■■□□□ 1.35
PBX1-222ENST00000627490 NAT10Q9H0A0 1025 aaKnown RBP23.48■■□□□ 1.35
PBX1-222ENST00000627490 CLIP2Q9UDT6 1046 aa23.48■■□□□ 1.35
PBX1-222ENST00000627490 CCT2P78371 535 aaKnown RBP23.47■■□□□ 1.35
PBX1-222ENST00000627490 SF3B3Q15393 1217 aaKnown RBP23.47■■□□□ 1.35
PBX1-222ENST00000627490 ADALQ6DHV7 355 aa23.47■■□□□ 1.35
PBX1-222ENST00000627490 BRAPQ7Z569 592 aa23.47■■□□□ 1.35
PBX1-222ENST00000627490 OSBP2Q969R2 916 aa23.47■■□□□ 1.35
PBX1-222ENST00000627490 YEATS4O95619 227 aa23.47■■□□□ 1.35
PBX1-222ENST00000627490 SYCP1Q15431 976 aa23.47■■□□□ 1.35
PBX1-222ENST00000627490 CCDC152Q4G0S7 254 aa23.47■■□□□ 1.35
PBX1-222ENST00000627490 MRPS27Q92552 414 aaKnown RBP23.47■■□□□ 1.35
PBX1-222ENST00000627490 ZNF594Q96JF6 807 aaPredicted RBP23.47■■□□□ 1.35
PBX1-222ENST00000627490 GREM2Q9H772 168 aa23.47■■□□□ 1.35
PBX1-222ENST00000627490 ANKRD18BA2A2Z9 1011 aa23.46■■□□□ 1.35
PBX1-222ENST00000627490 ITGA6P23229 1130 aa23.46■■□□□ 1.35
PBX1-222ENST00000627490 FSIP1Q8NA03 581 aa23.46■■□□□ 1.35
PBX1-222ENST00000627490 KCNG4Q8TDN1 519 aa23.46■■□□□ 1.35
PBX1-222ENST00000627490 XAGE2Q96GT9 111 aa23.46■■□□□ 1.35
PBX1-222ENST00000627490 CCDC94Q9BW85 323 aaPredicted RBP23.46■■□□□ 1.35
PBX1-222ENST00000627490 GOLPH3LQ9H4A5 285 aa23.46■■□□□ 1.35
PBX1-222ENST00000627490 DHX8Q14562 1220 aaKnown RBP23.45■■□□□ 1.34
PBX1-222ENST00000627490 CEP57L1Q8IYX8 460 aa23.45■■□□□ 1.34
PBX1-222ENST00000627490 ZNF512BQ96KM6 892 aaPredicted RBP23.45■■□□□ 1.34
PBX1-222ENST00000627490 MYH7P12883 1935 aa23.45■■□□□ 1.34
PBX1-222ENST00000627490 CTIFO43310 598 aaKnown RBP23.45■■□□□ 1.34
PBX1-222ENST00000627490 GTF2E1P29083 439 aaPredicted RBP23.45■■□□□ 1.34
PBX1-222ENST00000627490 ME1P48163 572 aa23.45■■□□□ 1.34
PBX1-222ENST00000627490 MB21D2Q8IYB1 491 aaPredicted RBP23.45■■□□□ 1.34
PBX1-222ENST00000627490 NCOA7Q8NI08 942 aa23.45■■□□□ 1.34
PBX1-222ENST00000627490 PUS3Q9BZE2 481 aaKnown RBP23.45■■□□□ 1.34
PBX1-222ENST00000627490 DDX24Q9GZR7 859 aaKnown RBP eCLIP23.45■■□□□ 1.34
PBX1-222ENST00000627490 NCOA5Q9HCD5 579 aaKnown RBP23.45■■□□□ 1.34
PBX1-222ENST00000627490 POLR3EQ9NVU0 708 aa23.45■■□□□ 1.34
PBX1-222ENST00000627490 BECN2A8MW95 431 aa23.44■■□□□ 1.34
PBX1-222ENST00000627490 FDPSP14324 419 aaKnown RBP23.44■■□□□ 1.34
PBX1-222ENST00000627490 CEBPZQ03701 1054 aaKnown RBP23.44■■□□□ 1.34
PBX1-222ENST00000627490 BPIFA3Q9BQP9 254 aa23.44■■□□□ 1.34
PBX1-222ENST00000627490 PAXBP1Q9Y5B6 917 aa23.44■■□□□ 1.34
PBX1-222ENST00000627490 TNRC6CQ9HCJ0 1690 aaKnown RBP23.43■■□□□ 1.34
PBX1-222ENST00000627490 POLRMTO00411 1230 aaKnown RBP23.43■■□□□ 1.34
PBX1-222ENST00000627490 FKBP4Q02790 459 aaKnown RBP eCLIP23.43■■□□□ 1.34
PBX1-222ENST00000627490 FMR1NBQ8N0W7 255 aaPredicted RBP23.43■■□□□ 1.34
PBX1-222ENST00000627490 CNBD1Q8NA66 436 aa23.43■■□□□ 1.34
PBX1-222ENST00000627490 C8orf76Q96K31 380 aa23.43■■□□□ 1.34
PBX1-222ENST00000627490 NAP1L2Q9ULW6 460 aaPredicted RBP23.43■■□□□ 1.34
PBX1-222ENST00000627490 SMTNL1A8MU46 457 aa23.42■■□□□ 1.34
PBX1-222ENST00000627490 PRC1O43663 620 aa23.42■■□□□ 1.34
PBX1-222ENST00000627490 WASHC4Q2M389 1173 aa23.42■■□□□ 1.34
PBX1-222ENST00000627490 SLFNL1Q499Z3 407 aa23.42■■□□□ 1.34
PBX1-222ENST00000627490 C11orf57Q6ZUT1 292 aaPredicted RBP23.42■■□□□ 1.34
PBX1-222ENST00000627490 RIOK3O14730 519 aaKnown RBP23.42■■□□□ 1.34
PBX1-222ENST00000627490 SERPINB2P05120 415 aa23.42■■□□□ 1.34
PBX1-222ENST00000627490 TAF7LQ5H9L4 462 aa23.42■■□□□ 1.34
PBX1-222ENST00000627490 RALYLQ86SE5 291 aaKnown RBP23.42■■□□□ 1.34
PBX1-222ENST00000627490 LINC00301Q8NCQ3 95 aa23.42■■□□□ 1.34
PBX1-222ENST00000627490 FBXO18Q8NFZ0 1043 aa23.42■■□□□ 1.34
PBX1-222ENST00000627490 NLRP3Q96P20 1036 aa23.42■■□□□ 1.34
PBX1-222ENST00000627490 PCDHA7Q9UN72 937 aa23.42■■□□□ 1.34
PBX1-222ENST00000627490 FGAP02671 866 aa23.41■■□□□ 1.34
PBX1-222ENST00000627490 DDR1Q08345 913 aa23.41■■□□□ 1.34
PBX1-222ENST00000627490 TTF1Q15361 905 aaPredicted RBP23.41■■□□□ 1.34
PBX1-222ENST00000627490 TTLL5Q6EMB2 1281 aa23.41■■□□□ 1.34
PBX1-222ENST00000627490 PRR5LQ6MZQ0 368 aa23.41■■□□□ 1.34
PBX1-222ENST00000627490 ZNF710Q8N1W2 664 aa23.41■■□□□ 1.34
PBX1-222ENST00000627490 KCND1Q9NSA2 647 aa23.41■■□□□ 1.34
PBX1-222ENST00000627490 NRBP1Q9UHY1 535 aa23.41■■□□□ 1.34
PBX1-222ENST00000627490 FOXP2O15409 715 aa23.4■■□□□ 1.34
PBX1-222ENST00000627490 STK38Q15208 465 aa23.4■■□□□ 1.34
PBX1-222ENST00000627490 A0A0G2JLW4 131 aa23.4■■□□□ 1.34
PBX1-222ENST00000627490 ZNF213O14771 459 aa23.4■■□□□ 1.34
PBX1-222ENST00000627490 ADORA1P30542 326 aa23.4■■□□□ 1.34
PBX1-222ENST00000627490 GSDMDP57764 484 aa23.4■■□□□ 1.34
PBX1-222ENST00000627490 DHX40Q8IX18 779 aaKnown RBP23.4■■□□□ 1.34
PBX1-222ENST00000627490 CACTINQ8WUQ7 758 aaKnown RBP23.4■■□□□ 1.34
PBX1-222ENST00000627490 CCDC85AQ96PX6 553 aaPredicted RBP23.4■■□□□ 1.34
PBX1-222ENST00000627490 ORC3Q9UBD5 711 aaPredicted RBP23.4■■□□□ 1.34
PBX1-222ENST00000627490 KLF18A0A0U1RQI7 1052 aa23.39■■□□□ 1.33
PBX1-222ENST00000627490 FOSBP53539 338 aa23.39■■□□□ 1.33
PBX1-222ENST00000627490 ST5P78524 1137 aa23.39■■□□□ 1.33
PBX1-222ENST00000627490 LRRC8AQ8IWT6 810 aa23.39■■□□□ 1.33
PBX1-222ENST00000627490 ANKRD7Q92527 254 aa23.39■■□□□ 1.33
PBX1-222ENST00000627490 FTOQ9C0B1 505 aaKnown RBP eCLIP23.39■■□□□ 1.33
PBX1-222ENST00000627490 IMPACTQ9P2X3 320 aa23.39■■□□□ 1.33
PBX1-222ENST00000627490 HPS5Q9UPZ3 1129 aa23.39■■□□□ 1.33
PBX1-222ENST00000627490 RIPOR2Q9Y4F9 1068 aa23.39■■□□□ 1.33
PBX1-222ENST00000627490 GOLGA8BA8MQT2 603 aa23.38■■□□□ 1.33
PBX1-222ENST00000627490 LRMPQ12912 555 aa23.38■■□□□ 1.33
PBX1-222ENST00000627490 SF3A1Q15459 793 aaKnown RBP23.38■■□□□ 1.33
PBX1-222ENST00000627490 ATP2B3Q16720 1220 aa23.38■■□□□ 1.33
PBX1-222ENST00000627490 CDC5LQ99459 802 aaKnown RBP23.38■■□□□ 1.33
PBX1-222ENST00000627490 SDF4Q9BRK5 362 aa23.38■■□□□ 1.33
PBX1-222ENST00000627490 CPLX1O14810 134 aa23.37■■□□□ 1.33
PBX1-222ENST00000627490 SPTLC2O15270 562 aa23.37■■□□□ 1.33
PBX1-222ENST00000627490 CDKL5O76039 1030 aa23.37■■□□□ 1.33
PBX1-222ENST00000627490 ZAP70P43403 619 aa23.37■■□□□ 1.33
PBX1-222ENST00000627490 ZRSR1Q15695 479 aaKnown RBP23.37■■□□□ 1.33
PBX1-222ENST00000627490 MYSM1Q5VVJ2 828 aa23.37■■□□□ 1.33
PBX1-222ENST00000627490 LDHAL6AQ6ZMR3 332 aa23.37■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms