RNA–Protein interactions for RNA: ENST00000624166.3

ATRX-214, Transcript of ATRX, chromatin remodeler, humanhuman

TSL 1 (best)

Gene ATRX, Length 4,272 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRX-214ENST00000624166 TCP11L1Q9NUJ3 509 aa13.38□□□□□ -0.27
ATRX-214ENST00000624166 POLR3EQ9NVU0 708 aa13.38□□□□□ -0.27
ATRX-214ENST00000624166 NAA30Q147X3 362 aaPredicted RBP13.38□□□□□ -0.27
ATRX-214ENST00000624166 LONRF2Q1L5Z9 754 aa13.38□□□□□ -0.27
ATRX-214ENST00000624166 CCDC144BQ3MJ40 725 aa13.38□□□□□ -0.27
ATRX-214ENST00000624166 SLC9C2Q5TAH2 1124 aa13.38□□□□□ -0.27
ATRX-214ENST00000624166 KRT40Q6A162 431 aa13.38□□□□□ -0.27
ATRX-214ENST00000624166 SRGAP1Q7Z6B7 1085 aa13.38□□□□□ -0.27
ATRX-214ENST00000624166 CAPZA3Q96KX2 299 aa13.38□□□□□ -0.27
ATRX-214ENST00000624166 CCDC42Q96M95 316 aa13.38□□□□□ -0.27
ATRX-214ENST00000624166 KIAA1210Q9ULL0 1709 aa13.38□□□□□ -0.27
ATRX-214ENST00000624166 GOLGA6CA6NDK9 693 aa13.38□□□□□ -0.27
ATRX-214ENST00000624166 GOLGA6DP0CG33 693 aa13.38□□□□□ -0.27
ATRX-214ENST00000624166 TRIML1Q8N9V2 468 aa13.38□□□□□ -0.27
ATRX-214ENST00000624166 GOLGA6AQ9NYA3 693 aa13.38□□□□□ -0.27
ATRX-214ENST00000624166 POLR2DO15514 142 aaKnown RBP13.37□□□□□ -0.27
ATRX-214ENST00000624166 RANBP6O60518 1105 aaKnown RBP13.37□□□□□ -0.27
ATRX-214ENST00000624166 STARD3NLO95772 234 aa13.37□□□□□ -0.27
ATRX-214ENST00000624166 VPS36Q86VN1 386 aa13.37□□□□□ -0.27
ATRX-214ENST00000624166 FBXO18Q8NFZ0 1043 aa13.37□□□□□ -0.27
ATRX-214ENST00000624166 ATRIPQ8WXE1 791 aa13.37□□□□□ -0.27
ATRX-214ENST00000624166 CDC23Q9UJX2 597 aa13.37□□□□□ -0.27
ATRX-214ENST00000624166 WWC3Q9ULE0 1092 aa13.37□□□□□ -0.27
ATRX-214ENST00000624166 SYNRGQ9UMZ2 1314 aa13.37□□□□□ -0.27
ATRX-214ENST00000624166 INPP5BP32019 993 aa13.37□□□□□ -0.27
ATRX-214ENST00000624166 ADKP55263 362 aaKnown RBP13.37□□□□□ -0.27
ATRX-214ENST00000624166 GCKRQ14397 625 aa13.37□□□□□ -0.27
ATRX-214ENST00000624166 TSGA10Q9BZW7 698 aa13.37□□□□□ -0.27
ATRX-214ENST00000624166 RRP15Q9Y3B9 282 aaKnown RBP13.37□□□□□ -0.27
ATRX-214ENST00000624166 QRICH2Q9H0J4 1663 aa13.37□□□□□ -0.27
ATRX-214ENST00000624166 SEC31AO94979 1220 aaKnown RBP13.37□□□□□ -0.27
ATRX-214ENST00000624166 ARID5BQ14865 1188 aa13.37□□□□□ -0.27
ATRX-214ENST00000624166 APPBP2Q92624 585 aa13.37□□□□□ -0.27
ATRX-214ENST00000624166 PGBD1Q96JS3 809 aa13.37□□□□□ -0.27
ATRX-214ENST00000624166 FANCLQ9NW38 375 aa13.37□□□□□ -0.27
ATRX-214ENST00000624166 ABCF2Q9UG63 623 aa13.37□□□□□ -0.27
ATRX-214ENST00000624166 IGHMBP2P38935 993 aaKnown RBP13.36□□□□□ -0.27
ATRX-214ENST00000624166 STAT6P42226 847 aa13.36□□□□□ -0.27
ATRX-214ENST00000624166 PNOCQ13519 176 aa13.36□□□□□ -0.27
ATRX-214ENST00000624166 CCDC178Q5BJE1 867 aa13.36□□□□□ -0.27
ATRX-214ENST00000624166 BCCIPQ9P287 314 aaKnown RBP eCLIP13.36□□□□□ -0.27
ATRX-214ENST00000624166 ATP10DQ9P241 1426 aa13.36□□□□□ -0.27
ATRX-214ENST00000624166 SLC39A6Q13433 755 aa13.36□□□□□ -0.27
ATRX-214ENST00000624166 GBP6Q6ZN66 633 aa13.36□□□□□ -0.27
ATRX-214ENST00000624166 TAX1BP1Q86VP1 789 aa13.36□□□□□ -0.27
ATRX-214ENST00000624166 EDC3Q96F86 508 aaKnown RBP13.36□□□□□ -0.27
ATRX-214ENST00000624166 EYA2O00167 538 aa13.36□□□□□ -0.27
ATRX-214ENST00000624166 PDIA3P30101 505 aaKnown RBP13.36□□□□□ -0.27
ATRX-214ENST00000624166 KIF5BP33176 963 aa13.36□□□□□ -0.27
ATRX-214ENST00000624166 ESR2Q92731 530 aa13.36□□□□□ -0.27
ATRX-214ENST00000624166 RAB34Q9BZG1 259 aa13.36□□□□□ -0.27
ATRX-214ENST00000624166 LGR6Q9HBX8 967 aa13.36□□□□□ -0.27
ATRX-214ENST00000624166 TIMM10P62072 90 aa13.36□□□□□ -0.27
ATRX-214ENST00000624166 PPFIA1Q13136 1202 aa13.36□□□□□ -0.27
ATRX-214ENST00000624166 SPECC1Q5M775 1068 aa13.36□□□□□ -0.27
ATRX-214ENST00000624166 LINC00301Q8NCQ3 95 aa13.36□□□□□ -0.27
ATRX-214ENST00000624166 HAUS7Q99871 368 aa13.36□□□□□ -0.27
ATRX-214ENST00000624166 ALDH8A1Q9H2A2 487 aaPredicted RBP13.36□□□□□ -0.27
ATRX-214ENST00000624166 PDE11AQ9HCR9 933 aa13.36□□□□□ -0.27
ATRX-214ENST00000624166 GOLGA6L10A0A0M3HER8 536 aa13.35□□□□□ -0.27
ATRX-214ENST00000624166 GOLGA6BA6NDN3 693 aa13.35□□□□□ -0.27
ATRX-214ENST00000624166 NDUFAB1O14561 156 aa13.35□□□□□ -0.27
ATRX-214ENST00000624166 EZRP15311 586 aaKnown RBP13.35□□□□□ -0.27
ATRX-214ENST00000624166 CFAP58Q5T655 872 aa13.35□□□□□ -0.27
ATRX-214ENST00000624166 CCDC121Q6ZUS5 278 aa13.35□□□□□ -0.27
ATRX-214ENST00000624166 TOM1L2Q6ZVM7 507 aa13.35□□□□□ -0.27
ATRX-214ENST00000624166 ANKLE2Q86XL3 938 aa13.35□□□□□ -0.27
ATRX-214ENST00000624166 CYP21A2P08686 494 aa13.35□□□□□ -0.27
ATRX-214ENST00000624166 KRT9P35527 623 aa13.35□□□□□ -0.27
ATRX-214ENST00000624166 KCNJ6P48051 423 aa13.35□□□□□ -0.27
ATRX-214ENST00000624166 ZRSR2Q15696 482 aaKnown RBP13.35□□□□□ -0.27
ATRX-214ENST00000624166 IFI16Q16666 785 aaKnown RBP13.35□□□□□ -0.27
ATRX-214ENST00000624166 PROSER2Q86WR7 435 aaPredicted RBP13.35□□□□□ -0.27
ATRX-214ENST00000624166 DRC1Q96MC2 740 aa13.35□□□□□ -0.27
ATRX-214ENST00000624166 GLI2P10070 1586 aa13.35□□□□□ -0.27
ATRX-214ENST00000624166 IGSF1Q8N6C5 1336 aa13.35□□□□□ -0.27
ATRX-214ENST00000624166 ARAP3Q8WWN8 1544 aa13.35□□□□□ -0.27
ATRX-214ENST00000624166 KRT2P35908 639 aa13.35□□□□□ -0.27
ATRX-214ENST00000624166 CCT6AP40227 531 aaKnown RBP13.35□□□□□ -0.27
ATRX-214ENST00000624166 DNA2P51530 1060 aa13.35□□□□□ -0.27
ATRX-214ENST00000624166 SLC39A14Q15043 492 aa13.35□□□□□ -0.27
ATRX-214ENST00000624166 DIS3L2Q8IYB7 885 aaKnown RBP13.35□□□□□ -0.27
ATRX-214ENST00000624166 BPIFA3Q9BQP9 254 aa13.35□□□□□ -0.27
ATRX-214ENST00000624166 EXOC1Q9NV70 894 aa13.35□□□□□ -0.27
ATRX-214ENST00000624166 DEXIO95424 95 aa13.34□□□□□ -0.27
ATRX-214ENST00000624166 DESI2Q9BSY9 194 aa13.34□□□□□ -0.27
ATRX-214ENST00000624166 PARD6BQ9BYG5 372 aa13.34□□□□□ -0.27
ATRX-214ENST00000624166 CLIC4Q9Y696 253 aa13.34□□□□□ -0.27
ATRX-214ENST00000624166 BICDL2A1A5D9 508 aa13.34□□□□□ -0.27
ATRX-214ENST00000624166 ZEB2O60315 1214 aa13.34□□□□□ -0.27
ATRX-214ENST00000624166 IDEP14735 1019 aa13.34□□□□□ -0.27
ATRX-214ENST00000624166 ARHGAP25P42331 645 aa13.34□□□□□ -0.27
ATRX-214ENST00000624166 CALML4Q96GE6 196 aa13.34□□□□□ -0.27
ATRX-214ENST00000624166 SSBP05455 408 aaKnown RBP eCLIP13.34□□□□□ -0.27
ATRX-214ENST00000624166 RXRAP19793 462 aa13.34□□□□□ -0.27
ATRX-214ENST00000624166 MAP2K1Q02750 393 aaPredicted RBP13.34□□□□□ -0.27
ATRX-214ENST00000624166 VSTM4Q8IW00 320 aa13.34□□□□□ -0.27
ATRX-214ENST00000624166 PPP6R2O75170 966 aa13.33□□□□□ -0.27
ATRX-214ENST00000624166 GNAT2P19087 354 aa13.33□□□□□ -0.27
ATRX-214ENST00000624166 DYDC1Q8WWB3 177 aa13.33□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms