RNA–Protein interactions for RNA: ENST00000623007.3

LDB3-208, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best) BASIC

Gene LDB3, Length 1,664 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-208ENST00000623007 NRXN2Q9P2S2 1712 aa19.19■□□□□ 0.66
LDB3-208ENST00000623007 ERICH2A1L162 156 aa19.18■□□□□ 0.66
LDB3-208ENST00000623007 CPLX1O14810 134 aa19.18■□□□□ 0.66
LDB3-208ENST00000623007 LDHCP07864 332 aa19.18■□□□□ 0.66
LDB3-208ENST00000623007 SLC3A2P08195 630 aaKnown RBP19.18■□□□□ 0.66
LDB3-208ENST00000623007 SYNE3Q6ZMZ3 975 aa19.18■□□□□ 0.66
LDB3-208ENST00000623007 PROM2Q8N271 834 aa19.18■□□□□ 0.66
LDB3-208ENST00000623007 LCORLQ8N3X6 602 aa19.18■□□□□ 0.66
LDB3-208ENST00000623007 CRNKL1Q9BZJ0 848 aaKnown RBP19.18■□□□□ 0.66
LDB3-208ENST00000623007 ATP8A2Q9NTI2 1148 aa19.18■□□□□ 0.66
LDB3-208ENST00000623007 CFAP45Q9UL16 551 aa19.18■□□□□ 0.66
LDB3-208ENST00000623007 COL1A1P02452 1464 aaPredicted RBP19.18■□□□□ 0.66
LDB3-208ENST00000623007 KLF18A0A0U1RQI7 1052 aa19.17■□□□□ 0.66
LDB3-208ENST00000623007 PDE6BP35913 854 aa19.17■□□□□ 0.66
LDB3-208ENST00000623007 TDRD7Q8NHU6 1098 aaKnown RBP19.17■□□□□ 0.66
LDB3-208ENST00000623007 NSUN4Q96CB9 384 aaKnown RBP19.17■□□□□ 0.66
LDB3-208ENST00000623007 RIOK1Q9BRS2 568 aaKnown RBP19.17■□□□□ 0.66
LDB3-208ENST00000623007 LRRC2Q9BYS8 371 aa19.17■□□□□ 0.66
LDB3-208ENST00000623007 TMX4Q9H1E5 349 aaPredicted RBP19.17■□□□□ 0.66
LDB3-208ENST00000623007 EPB41L4AQ9HCS5 686 aaPredicted RBP19.17■□□□□ 0.66
LDB3-208ENST00000623007 GGA1Q9UJY5 639 aa19.17■□□□□ 0.66
LDB3-208ENST00000623007 PTPDC1A2A3K4 754 aa19.17■□□□□ 0.66
LDB3-208ENST00000623007 SH2B2O14492 632 aaPredicted RBP19.17■□□□□ 0.66
LDB3-208ENST00000623007 ALDH1B1P30837 517 aa19.17■□□□□ 0.66
LDB3-208ENST00000623007 TBC1D10CQ8IV04 446 aa19.17■□□□□ 0.66
LDB3-208ENST00000623007 SLF2Q8IX21 1173 aa19.17■□□□□ 0.66
LDB3-208ENST00000623007 GOLGA8BA8MQT2 603 aa19.16■□□□□ 0.66
LDB3-208ENST00000623007 ANTXR2P58335 489 aa19.16■□□□□ 0.66
LDB3-208ENST00000623007 COL9A3Q14050 684 aaPredicted RBP19.16■□□□□ 0.66
LDB3-208ENST00000623007 USP48Q86UV5 1035 aa19.16■□□□□ 0.66
LDB3-208ENST00000623007 SP8Q8IXZ3 490 aa19.16■□□□□ 0.66
LDB3-208ENST00000623007 TBC1D22AQ8WUA7 517 aa19.16■□□□□ 0.66
LDB3-208ENST00000623007 ESR2Q92731 530 aa19.16■□□□□ 0.66
LDB3-208ENST00000623007 NOL10Q9BSC4 688 aaKnown RBP19.16■□□□□ 0.66
LDB3-208ENST00000623007 NBPF3Q9H094 633 aa19.16■□□□□ 0.66
LDB3-208ENST00000623007 NAP1L2Q9ULW6 460 aaPredicted RBP19.16■□□□□ 0.66
LDB3-208ENST00000623007 IQSEC3Q9UPP2 1182 aaPredicted RBP19.16■□□□□ 0.66
LDB3-208ENST00000623007 CCDC196A0A1B0GTZ2 297 aa19.15■□□□□ 0.66
LDB3-208ENST00000623007 LRRC37AA6NMS7 1700 aa19.15■□□□□ 0.66
LDB3-208ENST00000623007 BAG3O95817 575 aa19.15■□□□□ 0.66
LDB3-208ENST00000623007 NPR1P16066 1061 aa19.15■□□□□ 0.66
LDB3-208ENST00000623007 PPARAQ07869 468 aa19.15■□□□□ 0.66
LDB3-208ENST00000623007 CAVIN1Q6NZI2 390 aaKnown RBP19.15■□□□□ 0.66
LDB3-208ENST00000623007 DZIP1Q86YF9 867 aaKnown RBP19.15■□□□□ 0.66
LDB3-208ENST00000623007 NID2Q14112 1375 aa19.15■□□□□ 0.66
LDB3-208ENST00000623007 A0A0G2JLW4 131 aa19.14■□□□□ 0.66
LDB3-208ENST00000623007 LDHBP07195 334 aaKnown RBP19.14■□□□□ 0.66
LDB3-208ENST00000623007 MECOMQ03112 1051 aa19.14■□□□□ 0.66
LDB3-208ENST00000623007 DDR1Q08345 913 aa19.14■□□□□ 0.66
LDB3-208ENST00000623007 CDC37L1Q7L3B6 337 aa19.14■□□□□ 0.66
LDB3-208ENST00000623007 GPT2Q8TD30 523 aa19.14■□□□□ 0.66
LDB3-208ENST00000623007 ARPP21Q9UBL0 812 aaPredicted RBP19.14■□□□□ 0.66
LDB3-208ENST00000623007 PARP3Q9Y6F1 533 aa19.14■□□□□ 0.66
LDB3-208ENST00000623007 CCDC69A6NI79 296 aa19.14■□□□□ 0.65
LDB3-208ENST00000623007 B4E1Z4 1266 aa19.14■□□□□ 0.65
LDB3-208ENST00000623007 IL1R1P14778 569 aa19.14■□□□□ 0.65
LDB3-208ENST00000623007 TMEM67Q5HYA8 995 aa19.14■□□□□ 0.65
LDB3-208ENST00000623007 AMOTL1Q8IY63 956 aa19.14■□□□□ 0.65
LDB3-208ENST00000623007 CCDC24Q8N4L8 307 aa19.14■□□□□ 0.65
LDB3-208ENST00000623007 MIGA1Q8NAN2 632 aa19.14■□□□□ 0.65
LDB3-208ENST00000623007 TNS1Q9HBL0 1735 aaKnown RBP19.13■□□□□ 0.65
LDB3-208ENST00000623007 ZBTB43O43298 467 aa19.13■□□□□ 0.65
LDB3-208ENST00000623007 METAP2P50579 478 aaKnown RBP eCLIP19.13■□□□□ 0.65
LDB3-208ENST00000623007 CCT2P78371 535 aaKnown RBP19.13■□□□□ 0.65
LDB3-208ENST00000623007 ZSCAN23Q3MJ62 389 aa19.13■□□□□ 0.65
LDB3-208ENST00000623007 SBK1Q52WX2 424 aa19.13■□□□□ 0.65
LDB3-208ENST00000623007 CHST3Q7LGC8 479 aa19.13■□□□□ 0.65
LDB3-208ENST00000623007 IGDCC4Q8TDY8 1250 aa19.13■□□□□ 0.65
LDB3-208ENST00000623007 WASF1Q92558 559 aa19.13■□□□□ 0.65
LDB3-208ENST00000623007 ZNF396Q96N95 335 aaPredicted RBP19.13■□□□□ 0.65
LDB3-208ENST00000623007 NSFL1CQ9UNZ2 370 aaKnown RBP19.13■□□□□ 0.65
LDB3-208ENST00000623007 SUGT1Q9Y2Z0 365 aa19.13■□□□□ 0.65
LDB3-208ENST00000623007 IFIT3O14879 490 aaKnown RBP19.12■□□□□ 0.65
LDB3-208ENST00000623007 JAK2O60674 1132 aa19.12■□□□□ 0.65
LDB3-208ENST00000623007 UFL1O94874 794 aa19.12■□□□□ 0.65
LDB3-208ENST00000623007 FGRP09769 529 aa19.12■□□□□ 0.65
LDB3-208ENST00000623007 PLCG2P16885 1265 aa19.12■□□□□ 0.65
LDB3-208ENST00000623007 APOA5Q6Q788 366 aa19.12■□□□□ 0.65
LDB3-208ENST00000623007 NFXL1Q6ZNB6 911 aa19.12■□□□□ 0.65
LDB3-208ENST00000623007 UBAC1Q9BSL1 405 aa19.12■□□□□ 0.65
LDB3-208ENST00000623007 GRPEL1Q9HAV7 217 aa19.12■□□□□ 0.65
LDB3-208ENST00000623007 CNPY2Q9Y2B0 182 aa19.12■□□□□ 0.65
LDB3-208ENST00000623007 SLC12A7Q9Y666 1083 aa19.12■□□□□ 0.65
LDB3-208ENST00000623007 NEDD4P46934 1319 aa19.12■□□□□ 0.65
LDB3-208ENST00000623007 CTDNEP1O95476 244 aa19.11■□□□□ 0.65
LDB3-208ENST00000623007 GPSM2P81274 684 aa19.11■□□□□ 0.65
LDB3-208ENST00000623007 DNM1Q05193 864 aaKnown RBP19.11■□□□□ 0.65
LDB3-208ENST00000623007 CHAF1AQ13111 956 aaPredicted RBP19.11■□□□□ 0.65
LDB3-208ENST00000623007 ANP32BQ92688 251 aaKnown RBP19.11■□□□□ 0.65
LDB3-208ENST00000623007 ZSWIM5Q9P217 1185 aa19.11■□□□□ 0.65
LDB3-208ENST00000623007 ATP6V0A2Q9Y487 856 aa19.11■□□□□ 0.65
LDB3-208ENST00000623007 STK36Q9NRP7 1315 aa19.11■□□□□ 0.65
LDB3-208ENST00000623007 PPEF1O14829 653 aaPredicted RBP19.11■□□□□ 0.65
LDB3-208ENST00000623007 KDM4AO75164 1064 aa19.11■□□□□ 0.65
LDB3-208ENST00000623007 KLRK1P26718 216 aa19.11■□□□□ 0.65
LDB3-208ENST00000623007 PPP4CP60510 307 aa19.11■□□□□ 0.65
LDB3-208ENST00000623007 WTAPQ15007 396 aa19.11■□□□□ 0.65
LDB3-208ENST00000623007 CYB5R4Q7L1T6 521 aa19.11■□□□□ 0.65
LDB3-208ENST00000623007 IQCA1Q86XH1 822 aa19.11■□□□□ 0.65
LDB3-208ENST00000623007 COL23A1Q86Y22 540 aaPredicted RBP19.11■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms