RNA–Protein interactions for RNA: ENST00000618440.1

U6.42-201, humanhuman

BASIC

Gene U6, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U6.42-201ENST00000618440 FUT4P22083 530 aa7.53□□□□□ -1.2
U6.42-201ENST00000618440 USP5P45974 858 aa7.53□□□□□ -1.2
U6.42-201ENST00000618440 CILP2Q8IUL8 1156 aa7.53□□□□□ -1.2
U6.42-201ENST00000618440 FAM181AQ8N9Y4 354 aa7.53□□□□□ -1.2
U6.42-201ENST00000618440 KRTAP4-11Q9BYQ6 195 aa7.53□□□□□ -1.2
U6.42-201ENST00000618440 SYNGAP1Q96PV0 1343 aa7.52□□□□□ -1.2
U6.42-201ENST00000618440 ITPKAP23677 461 aa7.52□□□□□ -1.21
U6.42-201ENST00000618440 CDK5R2Q13319 367 aa7.52□□□□□ -1.21
U6.42-201ENST00000618440 ECM1Q16610 540 aa7.52□□□□□ -1.21
U6.42-201ENST00000618440 FBLN7Q53RD9 439 aa7.52□□□□□ -1.21
U6.42-201ENST00000618440 KIAA0319Q5VV43 1072 aa7.52□□□□□ -1.21
U6.42-201ENST00000618440 ATG4DQ86TL0 474 aaPredicted RBP7.52□□□□□ -1.21
U6.42-201ENST00000618440 PCDHGC5Q9Y5F6 944 aa7.52□□□□□ -1.21
U6.42-201ENST00000618440 DBX1A6NMT0 343 aa7.51□□□□□ -1.21
U6.42-201ENST00000618440 EIF4EBP3O60516 100 aaPredicted RBP7.51□□□□□ -1.21
U6.42-201ENST00000618440 FAM13AO94988 1023 aa7.51□□□□□ -1.21
U6.42-201ENST00000618440 STK11IPQ8N1F8 1099 aa7.51□□□□□ -1.21
U6.42-201ENST00000618440 RAD18Q9NS91 495 aa7.51□□□□□ -1.21
U6.42-201ENST00000618440 CRIM1Q9NZV1 1036 aa7.51□□□□□ -1.21
U6.42-201ENST00000618440 ZNF862O60290 1169 aa7.5□□□□□ -1.21
U6.42-201ENST00000618440 LRRN4CLQ8ND94 238 aa7.5□□□□□ -1.21
U6.42-201ENST00000618440 CORO1BQ9BR76 489 aa7.5□□□□□ -1.21
U6.42-201ENST00000618440 CARNS1A5YM72 827 aa7.49□□□□□ -1.21
U6.42-201ENST00000618440 LEFTY1O75610 366 aa7.49□□□□□ -1.21
U6.42-201ENST00000618440 FAM87AP0C7U9 286 aa7.49□□□□□ -1.21
U6.42-201ENST00000618440 MESP2Q0VG99 397 aa7.49□□□□□ -1.21
U6.42-201ENST00000618440 AAMPQ13685 434 aa7.49□□□□□ -1.21
U6.42-201ENST00000618440 FAM168AQ92567 244 aa7.49□□□□□ -1.21
U6.42-201ENST00000618440 MISP3Q96FF7 219 aa7.49□□□□□ -1.21
U6.42-201ENST00000618440 CCDC86Q9H6F5 360 aaKnown RBP7.49□□□□□ -1.21
U6.42-201ENST00000618440 ANO2Q9NQ90 1003 aa7.49□□□□□ -1.21
U6.42-201ENST00000618440 PLAGL2Q9UPG8 496 aa7.49□□□□□ -1.21
U6.42-201ENST00000618440 LIG1P18858 919 aa7.48□□□□□ -1.21
U6.42-201ENST00000618440 FKBP4Q02790 459 aaKnown RBP eCLIP7.48□□□□□ -1.21
U6.42-201ENST00000618440 FAAP100Q0VG06 881 aa7.48□□□□□ -1.21
U6.42-201ENST00000618440 ZNF211Q13398 564 aaPredicted RBP7.48□□□□□ -1.21
U6.42-201ENST00000618440 HP1BP3Q5SSJ5 553 aaPredicted RBP7.48□□□□□ -1.21
U6.42-201ENST00000618440 NETO1Q8TDF5 533 aa7.48□□□□□ -1.21
U6.42-201ENST00000618440 FANCD2OSQ96PS1 177 aa7.48□□□□□ -1.21
U6.42-201ENST00000618440 RC3H2Q9HBD1 1191 aaKnown RBP7.48□□□□□ -1.21
U6.42-201ENST00000618440 ABCB6Q9NP58 842 aa7.48□□□□□ -1.21
U6.42-201ENST00000618440 DISC1Q9NRI5 854 aa7.48□□□□□ -1.21
U6.42-201ENST00000618440 BIN1O00499 593 aa7.47□□□□□ -1.21
U6.42-201ENST00000618440 OXCT1P55809 520 aa7.47□□□□□ -1.21
U6.42-201ENST00000618440 SF3B2Q13435 895 aaKnown RBP7.47□□□□□ -1.21
U6.42-201ENST00000618440 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP7.47□□□□□ -1.21
U6.42-201ENST00000618440 FARP2O94887 1054 aaPredicted RBP7.46□□□□□ -1.22
U6.42-201ENST00000618440 PRKCQQ04759 706 aa7.46□□□□□ -1.22
U6.42-201ENST00000618440 PDE3AQ14432 1141 aa7.46□□□□□ -1.22
U6.42-201ENST00000618440 CYP27C1Q4G0S4 372 aa7.46□□□□□ -1.22
U6.42-201ENST00000618440 TMEM40Q8WWA1 233 aa7.46□□□□□ -1.22
U6.42-201ENST00000618440 VAV3Q9UKW4 847 aa7.46□□□□□ -1.22
U6.42-201ENST00000618440 IGHA2P01877 340 aa7.45□□□□□ -1.22
U6.42-201ENST00000618440 ZFYVE1Q9HBF4 777 aa7.45□□□□□ -1.22
U6.42-201ENST00000618440 NPHS2Q9NP85 383 aa7.45□□□□□ -1.22
U6.42-201ENST00000618440 NEFMP07197 916 aa7.44□□□□□ -1.22
U6.42-201ENST00000618440 PTPN12Q05209 780 aaKnown RBP7.44□□□□□ -1.22
U6.42-201ENST00000618440 AP3B2Q13367 1082 aa7.44□□□□□ -1.22
U6.42-201ENST00000618440 ORC1Q13415 861 aa7.44□□□□□ -1.22
U6.42-201ENST00000618440 KIF4BQ2VIQ3 1234 aa7.44□□□□□ -1.22
U6.42-201ENST00000618440 FAM214BQ7L5A3 538 aa7.44□□□□□ -1.22
U6.42-201ENST00000618440 DUSP23Q9BVJ7 150 aa7.44□□□□□ -1.22
U6.42-201ENST00000618440 SERPINA10Q9UK55 444 aa7.44□□□□□ -1.22
U6.42-201ENST00000618440 IQCJ-SCHIP1C9J366 451 aaPredicted RBP7.43□□□□□ -1.22
U6.42-201ENST00000618440 ID3Q02535 119 aa7.43□□□□□ -1.22
U6.42-201ENST00000618440 TTLL4Q14679 1199 aa7.43□□□□□ -1.22
U6.42-201ENST00000618440 PRPF40BQ6NWY9 871 aaKnown RBP7.43□□□□□ -1.22
U6.42-201ENST00000618440 PDZD3Q86UT5 571 aa7.43□□□□□ -1.22
U6.42-201ENST00000618440 CCDC97Q96F63 343 aaPredicted RBP7.43□□□□□ -1.22
U6.42-201ENST00000618440 ZC3H12CQ9C0D7 883 aaKnown RBP7.43□□□□□ -1.22
U6.42-201ENST00000618440 MKNK2Q9HBH9 465 aa7.43□□□□□ -1.22
U6.42-201ENST00000618440 ZNF503-AS2A6NEH8 195 aa7.42□□□□□ -1.22
U6.42-201ENST00000618440 CEACAM5P06731 702 aa7.42□□□□□ -1.22
U6.42-201ENST00000618440 ZNF157P51786 506 aaPredicted RBP7.42□□□□□ -1.22
U6.42-201ENST00000618440 IFI16Q16666 785 aaKnown RBP7.42□□□□□ -1.22
U6.42-201ENST00000618440 SMYD4Q8IYR2 804 aaPredicted RBP7.42□□□□□ -1.22
U6.42-201ENST00000618440 HEXIM2Q96MH2 286 aaKnown RBP7.42□□□□□ -1.22
U6.42-201ENST00000618440 EHD4Q9H223 541 aa7.42□□□□□ -1.22
U6.42-201ENST00000618440 TNKS2Q9H2K2 1166 aa7.42□□□□□ -1.22
U6.42-201ENST00000618440 ARID3CA6NKF2 412 aa7.41□□□□□ -1.22
U6.42-201ENST00000618440 ABL1P00519 1130 aa7.41□□□□□ -1.22
U6.42-201ENST00000618440 AOC3Q16853 763 aa7.41□□□□□ -1.22
U6.42-201ENST00000618440 FLAD1Q8NFF5 587 aa7.41□□□□□ -1.22
U6.42-201ENST00000618440 PI4K2BQ8TCG2 481 aa7.41□□□□□ -1.22
U6.42-201ENST00000618440 FAM129BQ96TA1 746 aa7.41□□□□□ -1.22
U6.42-201ENST00000618440 KRTAP4-5Q9BYR2 181 aa7.41□□□□□ -1.22
U6.42-201ENST00000618440 ATXN3LQ9H3M9 355 aa7.41□□□□□ -1.22
U6.42-201ENST00000618440 PRDM7Q9NQW5 492 aa7.41□□□□□ -1.22
U6.42-201ENST00000618440 ARHGAP4P98171 946 aa7.4□□□□□ -1.22
U6.42-201ENST00000618440 RPS26P11Q5JNZ5 115 aaPredicted RBP7.4□□□□□ -1.22
U6.42-201ENST00000618440 C1QL4Q86Z23 238 aa7.4□□□□□ -1.22
U6.42-201ENST00000618440 DDX54Q8TDD1 881 aaKnown RBP7.4□□□□□ -1.22
U6.42-201ENST00000618440 STK35Q8TDR2 534 aa7.4□□□□□ -1.22
U6.42-201ENST00000618440 TMEM238LA0A1B0GVL6 79 aa7.39□□□□□ -1.23
U6.42-201ENST00000618440 ICMTO60725 284 aa7.39□□□□□ -1.23
U6.42-201ENST00000618440 GSTP1P09211 210 aaKnown RBP7.39□□□□□ -1.23
U6.42-201ENST00000618440 HCLS1P14317 486 aaPredicted RBP7.39□□□□□ -1.23
U6.42-201ENST00000618440 HRASLS5Q96KN8 279 aa7.39□□□□□ -1.23
U6.42-201ENST00000618440 SLC23A3Q6PIS1 610 aa7.38□□□□□ -1.23
U6.42-201ENST00000618440 ISL2Q96A47 359 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms