RNA–Protein interactions for RNA: ENST00000611132.4

VPS36-207, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 1 (best) BASIC

Gene VPS36, Length 4,607 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-207ENST00000611132 ZEB2O60315 1214 aa16.58■□□□□ 0.24
VPS36-207ENST00000611132 RESTQ13127 1097 aa16.58■□□□□ 0.24
VPS36-207ENST00000611132 IQUBQ8NA54 791 aa16.58■□□□□ 0.24
VPS36-207ENST00000611132 CDK12Q9NYV4 1490 aaPredicted RBP16.58■□□□□ 0.24
VPS36-207ENST00000611132 TRIM14Q14142 442 aa16.58■□□□□ 0.24
VPS36-207ENST00000611132 GCKRQ14397 625 aa16.58■□□□□ 0.24
VPS36-207ENST00000611132 KMT5BQ4FZB7 885 aa16.58■□□□□ 0.24
VPS36-207ENST00000611132 CCDC91Q7Z6B0 441 aa16.58■□□□□ 0.24
VPS36-207ENST00000611132 ANKRD7Q92527 254 aa16.58■□□□□ 0.24
VPS36-207ENST00000611132 FANCLQ9NW38 375 aa16.58■□□□□ 0.24
VPS36-207ENST00000611132 PLEKHG3A1L390 1219 aa16.57■□□□□ 0.24
VPS36-207ENST00000611132 TRMT44Q8IYL2 757 aaKnown RBP16.57■□□□□ 0.24
VPS36-207ENST00000611132 GPTP24298 496 aa16.57■□□□□ 0.24
VPS36-207ENST00000611132 VAV2P52735 878 aa16.57■□□□□ 0.24
VPS36-207ENST00000611132 VPS36Q86VN1 386 aa16.57■□□□□ 0.24
VPS36-207ENST00000611132 DYDC1Q8WWB3 177 aa16.57■□□□□ 0.24
VPS36-207ENST00000611132 VPS16Q9H269 839 aa16.57■□□□□ 0.24
VPS36-207ENST00000611132 NFATC2IPQ8NCF5 419 aa16.57■□□□□ 0.24
VPS36-207ENST00000611132 ESR2Q92731 530 aa16.57■□□□□ 0.24
VPS36-207ENST00000611132 CCDC43Q96MW1 224 aaKnown RBP16.57■□□□□ 0.24
VPS36-207ENST00000611132 FTOQ9C0B1 505 aaKnown RBP eCLIP16.57■□□□□ 0.24
VPS36-207ENST00000611132 SYNRGQ9UMZ2 1314 aa16.57■□□□□ 0.24
VPS36-207ENST00000611132 STX10O60499 249 aa16.57■□□□□ 0.24
VPS36-207ENST00000611132 NF2P35240 595 aa16.57■□□□□ 0.24
VPS36-207ENST00000611132 HNRNPH2P55795 449 aaKnown RBP16.57■□□□□ 0.24
VPS36-207ENST00000611132 CCDC144BQ3MJ40 725 aa16.57■□□□□ 0.24
VPS36-207ENST00000611132 TMEM87BQ96K49 555 aa16.57■□□□□ 0.24
VPS36-207ENST00000611132 EYA2O00167 538 aa16.56■□□□□ 0.24
VPS36-207ENST00000611132 IDEP14735 1019 aa16.56■□□□□ 0.24
VPS36-207ENST00000611132 POLA2Q14181 598 aa16.56■□□□□ 0.24
VPS36-207ENST00000611132 ZFYVE27Q5T4F4 411 aa16.56■□□□□ 0.24
VPS36-207ENST00000611132 DIS3L2Q8IYB7 885 aaKnown RBP16.56■□□□□ 0.24
VPS36-207ENST00000611132 NSUN7Q8NE18 718 aaKnown RBP16.56■□□□□ 0.24
VPS36-207ENST00000611132 CCDC113Q9H0I3 377 aa16.56■□□□□ 0.24
VPS36-207ENST00000611132 EXOC1Q9NV70 894 aa16.56■□□□□ 0.24
VPS36-207ENST00000611132 ADCY9O60503 1353 aa16.56■□□□□ 0.24
VPS36-207ENST00000611132 PNPLA6Q8IY17 1366 aa16.56■□□□□ 0.24
VPS36-207ENST00000611132 GOLGA6CA6NDK9 693 aa16.56■□□□□ 0.24
VPS36-207ENST00000611132 GOLGA6DP0CG33 693 aa16.56■□□□□ 0.24
VPS36-207ENST00000611132 CABP5Q9NP86 173 aa16.56■□□□□ 0.24
VPS36-207ENST00000611132 GOLGA6AQ9NYA3 693 aa16.56■□□□□ 0.24
VPS36-207ENST00000611132 KIF5BP33176 963 aa16.56■□□□□ 0.24
VPS36-207ENST00000611132 APPBP2Q92624 585 aa16.56■□□□□ 0.24
VPS36-207ENST00000611132 SEPT11Q9NVA2 429 aaKnown RBP16.56■□□□□ 0.24
VPS36-207ENST00000611132 IKBKBO14920 756 aa16.55■□□□□ 0.24
VPS36-207ENST00000611132 KRT9P35527 623 aa16.55■□□□□ 0.24
VPS36-207ENST00000611132 MAP2K1Q02750 393 aaPredicted RBP16.55■□□□□ 0.24
VPS36-207ENST00000611132 RAB34Q9BZG1 259 aa16.55■□□□□ 0.24
VPS36-207ENST00000611132 TMCO5BA8MYB1 307 aa16.55■□□□□ 0.24
VPS36-207ENST00000611132 B4E1Z4 1266 aa16.55■□□□□ 0.24
VPS36-207ENST00000611132 CYP21A2P08686 494 aa16.55■□□□□ 0.24
VPS36-207ENST00000611132 CLIC4Q9Y696 253 aa16.55■□□□□ 0.24
VPS36-207ENST00000611132 ZNF589Q86UQ0 364 aaPredicted RBP16.55■□□□□ 0.24
VPS36-207ENST00000611132 ZNF710Q8N1W2 664 aa16.55■□□□□ 0.24
VPS36-207ENST00000611132 FBXO18Q8NFZ0 1043 aa16.55■□□□□ 0.24
VPS36-207ENST00000611132 CALML4Q96GE6 196 aa16.55■□□□□ 0.24
VPS36-207ENST00000611132 TCEAL9Q9UHQ7 104 aa16.55■□□□□ 0.24
VPS36-207ENST00000611132 PDIA3P30101 505 aaKnown RBP16.55■□□□□ 0.24
VPS36-207ENST00000611132 LONRF2Q1L5Z9 754 aa16.55■□□□□ 0.24
VPS36-207ENST00000611132 CCDC40Q4G0X9 1142 aa16.55■□□□□ 0.24
VPS36-207ENST00000611132 PHKBQ93100 1093 aa16.55■□□□□ 0.24
VPS36-207ENST00000611132 PGBD1Q96JS3 809 aa16.55■□□□□ 0.24
VPS36-207ENST00000611132 ARFGAP2Q8N6H7 521 aa16.54■□□□□ 0.24
VPS36-207ENST00000611132 PDE11AQ9HCR9 933 aa16.54■□□□□ 0.24
VPS36-207ENST00000611132 SLC4A4Q9Y6R1 1079 aa16.54■□□□□ 0.24
VPS36-207ENST00000611132 KDRP35968 1356 aa16.54■□□□□ 0.24
VPS36-207ENST00000611132 NDUFAB1O14561 156 aa16.54■□□□□ 0.24
VPS36-207ENST00000611132 KRT2P35908 639 aa16.54■□□□□ 0.24
VPS36-207ENST00000611132 NOP2P46087 812 aaKnown RBP16.54■□□□□ 0.24
VPS36-207ENST00000611132 WHAMMP3Q1A5X7 153 aa16.54■□□□□ 0.24
VPS36-207ENST00000611132 CFAP58Q5T655 872 aa16.54■□□□□ 0.24
VPS36-207ENST00000611132 B4GALNT4Q76KP1 1039 aa16.54■□□□□ 0.24
VPS36-207ENST00000611132 CTNND2Q9UQB3 1225 aa16.54■□□□□ 0.24
VPS36-207ENST00000611132 INPP5BP32019 993 aa16.54■□□□□ 0.24
VPS36-207ENST00000611132 TMOD3Q9NYL9 352 aa16.54■□□□□ 0.24
VPS36-207ENST00000611132 ATP2C2O75185 946 aa16.54■□□□□ 0.24
VPS36-207ENST00000611132 CEBPAP49715 358 aaPredicted RBP16.54■□□□□ 0.24
VPS36-207ENST00000611132 IFIT1BQ5T764 474 aaKnown RBP16.54■□□□□ 0.24
VPS36-207ENST00000611132 GOPCQ9HD26 462 aa16.54■□□□□ 0.24
VPS36-207ENST00000611132 WWC3Q9ULE0 1092 aa16.54■□□□□ 0.24
VPS36-207ENST00000611132 GPAA1O43292 621 aa16.53■□□□□ 0.24
VPS36-207ENST00000611132 CTIFO43310 598 aaKnown RBP16.53■□□□□ 0.24
VPS36-207ENST00000611132 KCNQ3O43525 872 aa16.53■□□□□ 0.24
VPS36-207ENST00000611132 TMEM266Q2M3C6 531 aa16.53■□□□□ 0.24
VPS36-207ENST00000611132 POTEDQ86YR6 584 aa16.53■□□□□ 0.24
VPS36-207ENST00000611132 SLF1Q9BQI6 1058 aa16.53■□□□□ 0.24
VPS36-207ENST00000611132 MKNK2Q9HBH9 465 aa16.53■□□□□ 0.24
VPS36-207ENST00000611132 SEC63Q9UGP8 760 aaKnown RBP16.53■□□□□ 0.24
VPS36-207ENST00000611132 RPAP1Q9BWH6 1393 aaPredicted RBP16.53■□□□□ 0.24
VPS36-207ENST00000611132 ZNF790Q6PG37 636 aa16.53■□□□□ 0.24
VPS36-207ENST00000611132 CCDC121Q6ZUS5 278 aa16.53■□□□□ 0.24
VPS36-207ENST00000611132 CDC42BPBQ9Y5S2 1711 aa16.53■□□□□ 0.24
VPS36-207ENST00000611132 LRRC7Q96NW7 1537 aa16.53■□□□□ 0.24
VPS36-207ENST00000611132 MACROD2A1Z1Q3 448 aa16.53■□□□□ 0.24
VPS36-207ENST00000611132 CCDC151A5D8V7 595 aa16.53■□□□□ 0.24
VPS36-207ENST00000611132 GOLGA6BA6NDN3 693 aa16.53■□□□□ 0.24
VPS36-207ENST00000611132 ACTN2P35609 894 aa16.53■□□□□ 0.24
VPS36-207ENST00000611132 CAVIN4Q5BKX8 364 aa16.53■□□□□ 0.24
VPS36-207ENST00000611132 SRGAP1Q7Z6B7 1085 aa16.53■□□□□ 0.24
VPS36-207ENST00000611132 CCDC51Q96ER9 411 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms