RNA–Protein interactions for RNA: ENST00000608988.5

SHANK2-220, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5

Gene SHANK2, Length 1,879 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-220ENST00000608988 FOXP2O15409 715 aa25.72■■□□□ 1.71
SHANK2-220ENST00000608988 FGAP02671 866 aa25.72■■□□□ 1.71
SHANK2-220ENST00000608988 SHC4Q6S5L8 630 aa25.72■■□□□ 1.71
SHANK2-220ENST00000608988 GPHNQ9NQX3 736 aaPredicted RBP25.72■■□□□ 1.71
SHANK2-220ENST00000608988 CEP126Q9P2H0 1117 aa25.72■■□□□ 1.71
SHANK2-220ENST00000608988 GORABQ5T7V8 394 aa25.71■■□□□ 1.71
SHANK2-220ENST00000608988 ANKLE2Q86XL3 938 aa25.71■■□□□ 1.71
SHANK2-220ENST00000608988 RABGGTAQ92696 567 aa25.71■■□□□ 1.71
SHANK2-220ENST00000608988 DPF2Q92785 391 aa25.71■■□□□ 1.71
SHANK2-220ENST00000608988 ALG1Q9BT22 464 aa25.71■■□□□ 1.71
SHANK2-220ENST00000608988 CCDC9Q9Y3X0 531 aaKnown RBP25.71■■□□□ 1.71
SHANK2-220ENST00000608988 ZNF213O14771 459 aa25.7■■□□□ 1.71
SHANK2-220ENST00000608988 PPFIA3O75145 1194 aa25.7■■□□□ 1.71
SHANK2-220ENST00000608988 GPS2Q13227 327 aa25.7■■□□□ 1.71
SHANK2-220ENST00000608988 TTC39AQ5SRH9 613 aa25.7■■□□□ 1.71
SHANK2-220ENST00000608988 MAP3K14Q99558 947 aa25.7■■□□□ 1.71
SHANK2-220ENST00000608988 BAG1Q99933 345 aaPredicted RBP25.7■■□□□ 1.71
SHANK2-220ENST00000608988 TUBB4BP68371 445 aa25.7■■□□□ 1.7
SHANK2-220ENST00000608988 WASHC4Q2M389 1173 aa25.7■■□□□ 1.7
SHANK2-220ENST00000608988 KRBA2Q6ZNG9 492 aa25.7■■□□□ 1.7
SHANK2-220ENST00000608988 RSRC2Q7L4I2 434 aaKnown RBP25.7■■□□□ 1.7
SHANK2-220ENST00000608988 VPS37DQ86XT2 251 aa25.7■■□□□ 1.7
SHANK2-220ENST00000608988 ANGEL1Q9UNK9 670 aaKnown RBP25.7■■□□□ 1.7
SHANK2-220ENST00000608988 MEGF6O75095 1541 aa25.69■■□□□ 1.7
SHANK2-220ENST00000608988 ERICH4A6NGS2 130 aa25.69■■□□□ 1.7
SHANK2-220ENST00000608988 TRDNQ13061 729 aa25.69■■□□□ 1.7
SHANK2-220ENST00000608988 MUM1L1Q5H9M0 696 aa25.69■■□□□ 1.7
SHANK2-220ENST00000608988 CC2D1AQ6P1N0 951 aaPredicted RBP25.69■■□□□ 1.7
SHANK2-220ENST00000608988 MRFAP1Q9Y605 127 aa25.69■■□□□ 1.7
SHANK2-220ENST00000608988 MARCKSP29966 332 aaPredicted RBP25.68■■□□□ 1.7
SHANK2-220ENST00000608988 KRT40Q6A162 431 aa25.68■■□□□ 1.7
SHANK2-220ENST00000608988 SYTL4Q96C24 671 aaPredicted RBP25.68■■□□□ 1.7
SHANK2-220ENST00000608988 LRRC24Q50LG9 513 aa25.68■■□□□ 1.7
SHANK2-220ENST00000608988 METTL16Q86W50 562 aaKnown RBP25.68■■□□□ 1.7
SHANK2-220ENST00000608988 FANCLQ9NW38 375 aa25.68■■□□□ 1.7
SHANK2-220ENST00000608988 STK36Q9NRP7 1315 aa25.68■■□□□ 1.7
SHANK2-220ENST00000608988 ALS2Q96Q42 1657 aa25.67■■□□□ 1.7
SHANK2-220ENST00000608988 METAP2P50579 478 aaKnown RBP eCLIP25.67■■□□□ 1.7
SHANK2-220ENST00000608988 HAND2P61296 217 aa25.67■■□□□ 1.7
SHANK2-220ENST00000608988 PPP2R3AQ06190 1150 aa25.67■■□□□ 1.7
SHANK2-220ENST00000608988 PNOCQ13519 176 aa25.67■■□□□ 1.7
SHANK2-220ENST00000608988 TUBB2AQ13885 445 aa25.67■■□□□ 1.7
SHANK2-220ENST00000608988 CT47A1Q5JQC4 288 aaPredicted RBP25.67■■□□□ 1.7
SHANK2-220ENST00000608988 TRIML1Q8N9V2 468 aa25.67■■□□□ 1.7
SHANK2-220ENST00000608988 MLKLQ8NB16 471 aa25.67■■□□□ 1.7
SHANK2-220ENST00000608988 CNNM3Q8NE01 707 aa25.67■■□□□ 1.7
SHANK2-220ENST00000608988 TUBB2BQ9BVA1 445 aa25.67■■□□□ 1.7
SHANK2-220ENST00000608988 ARFGAP3Q9NP61 516 aa25.67■■□□□ 1.7
SHANK2-220ENST00000608988 TMEM51Q9NW97 253 aa25.67■■□□□ 1.7
SHANK2-220ENST00000608988 NLRP2Q9NX02 1062 aa25.67■■□□□ 1.7
SHANK2-220ENST00000608988 KCNH3Q9ULD8 1083 aa25.67■■□□□ 1.7
SHANK2-220ENST00000608988 ATRNO75882 1429 aa25.67■■□□□ 1.7
SHANK2-220ENST00000608988 MYH7P12883 1935 aa25.67■■□□□ 1.7
SHANK2-220ENST00000608988 TBC1D8O95759 1140 aa25.66■■□□□ 1.7
SHANK2-220ENST00000608988 FKBP4Q02790 459 aaKnown RBP eCLIP25.66■■□□□ 1.76e-9■■■□□ 17.9
SHANK2-220ENST00000608988 GNL2Q13823 731 aaKnown RBP25.66■■□□□ 1.7
SHANK2-220ENST00000608988 TRIM29Q14134 588 aa25.66■■□□□ 1.7
SHANK2-220ENST00000608988 SPECC1LQ69YQ0 1117 aa25.66■■□□□ 1.7
SHANK2-220ENST00000608988 ENOX1Q8TC92 643 aaKnown RBP25.66■■□□□ 1.7
SHANK2-220ENST00000608988 TMEM87BQ96K49 555 aa25.66■■□□□ 1.7
SHANK2-220ENST00000608988 DDX24Q9GZR7 859 aaKnown RBP eCLIP25.66■■□□□ 1.7
SHANK2-220ENST00000608988 FANCGO15287 622 aa25.66■■□□□ 1.7
SHANK2-220ENST00000608988 IRX5P78411 483 aaPredicted RBP25.66■■□□□ 1.7
SHANK2-220ENST00000608988 NT5DC1Q5TFE4 455 aa25.66■■□□□ 1.7
SHANK2-220ENST00000608988 KRT28Q7Z3Y7 464 aa25.66■■□□□ 1.7
SHANK2-220ENST00000608988 GOLGA1Q92805 767 aa25.66■■□□□ 1.7
SHANK2-220ENST00000608988 SH2B2O14492 632 aaPredicted RBP25.65■■□□□ 1.7
SHANK2-220ENST00000608988 GNG11P61952 73 aa25.65■■□□□ 1.7
SHANK2-220ENST00000608988 BRD3Q15059 726 aa25.65■■□□□ 1.7
SHANK2-220ENST00000608988 INTS13Q9NVM9 706 aa25.65■■□□□ 1.7
SHANK2-220ENST00000608988 PSD3Q9NYI0 1048 aa25.65■■□□□ 1.7
SHANK2-220ENST00000608988 POTEB2H3BUK9 544 aa25.64■■□□□ 1.7
SHANK2-220ENST00000608988 ZNF18P17022 549 aa25.64■■□□□ 1.7
SHANK2-220ENST00000608988 CABP4P57796 275 aa25.64■■□□□ 1.7
SHANK2-220ENST00000608988 MSL3Q8N5Y2 521 aaKnown RBP25.64■■□□□ 1.7
SHANK2-220ENST00000608988 KRI1Q8N9T8 703 aaKnown RBP25.64■■□□□ 1.7
SHANK2-220ENST00000608988 PCDHA5Q9Y5H7 936 aa25.64■■□□□ 1.7
SHANK2-220ENST00000608988 TMEM232C9JQI7 657 aa25.64■■□□□ 1.69
SHANK2-220ENST00000608988 MDM2Q00987 491 aaPredicted RBP25.64■■□□□ 1.69
SHANK2-220ENST00000608988 ISM2Q6H9L7 571 aa25.64■■□□□ 1.69
SHANK2-220ENST00000608988 WASF1Q92558 559 aa25.64■■□□□ 1.69
SHANK2-220ENST00000608988 KIFC2Q96AC6 838 aa25.64■■□□□ 1.69
SHANK2-220ENST00000608988 ORAI2Q96SN7 254 aa25.64■■□□□ 1.69
SHANK2-220ENST00000608988 ECM29Q5VYK3 1845 aa25.63■■□□□ 1.69
SHANK2-220ENST00000608988 GPAA1O43292 621 aa25.63■■□□□ 1.69
SHANK2-220ENST00000608988 PIP4K2AP48426 406 aaPredicted RBP25.63■■□□□ 1.69
SHANK2-220ENST00000608988 HNRNPH2P55795 449 aaKnown RBP25.63■■□□□ 1.69
SHANK2-220ENST00000608988 LONRF3Q496Y0 759 aa25.63■■□□□ 1.69
SHANK2-220ENST00000608988 KANK3Q6NY19 840 aa25.63■■□□□ 1.69
SHANK2-220ENST00000608988 LMOD2Q6P5Q4 547 aa25.63■■□□□ 1.69
SHANK2-220ENST00000608988 XAGE2Q96GT9 111 aa25.63■■□□□ 1.69
SHANK2-220ENST00000608988 GNL3Q9BVP2 549 aaKnown RBP eCLIP25.63■■□□□ 1.69
SHANK2-220ENST00000608988 NAA15Q9BXJ9 866 aaKnown RBP25.63■■□□□ 1.69
SHANK2-220ENST00000608988 GJB4Q9NTQ9 266 aa25.63■■□□□ 1.69
SHANK2-220ENST00000608988 COL18A1P39060 1754 aa25.63■■□□□ 1.69
SHANK2-220ENST00000608988 CCDC151A5D8V7 595 aa25.62■■□□□ 1.69
SHANK2-220ENST00000608988 SMC1AQ14683 1233 aaKnown RBP25.62■■□□□ 1.69
SHANK2-220ENST00000608988 TC2NQ8N9U0 490 aa25.62■■□□□ 1.69
SHANK2-220ENST00000608988 PANX2Q96RD6 677 aa25.62■■□□□ 1.69
SHANK2-220ENST00000608988 NBPF26B4DH59 902 aa25.62■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms