RNA–Protein interactions for RNA: ENST00000604743.5

TUBE1-208, Transcript of tubulin epsilon 1, humanhuman

TSL 3

Gene TUBE1, Length 959 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-208ENST00000604743 SSC5DA1L4H1 1573 aa17.68■□□□□ 0.42
TUBE1-208ENST00000604743 ZBTB22O15209 634 aa17.68■□□□□ 0.42
TUBE1-208ENST00000604743 PPP1R12BO60237 982 aaPredicted RBP17.68■□□□□ 0.42
TUBE1-208ENST00000604743 SLC10A3P09131 477 aa17.68■□□□□ 0.42
TUBE1-208ENST00000604743 KIF23Q02241 960 aaPredicted RBP17.68■□□□□ 0.42
TUBE1-208ENST00000604743 CDC42EP5Q6NZY7 148 aa17.68■□□□□ 0.42
TUBE1-208ENST00000604743 AACSQ86V21 672 aa17.68■□□□□ 0.42
TUBE1-208ENST00000604743 RASAL3Q86YV0 1011 aa17.68■□□□□ 0.42
TUBE1-208ENST00000604743 USP40Q9NVE5 1235 aa17.68■□□□□ 0.42
TUBE1-208ENST00000604743 RAI14Q9P0K7 980 aa17.68■□□□□ 0.42
TUBE1-208ENST00000604743 MECOMQ03112 1051 aa17.67■□□□□ 0.42
TUBE1-208ENST00000604743 MKRN3Q13064 507 aaKnown RBP17.67■□□□□ 0.42
TUBE1-208ENST00000604743 CTCFP49711 727 aaPredicted RBP17.66■□□□□ 0.42
TUBE1-208ENST00000604743 TCP10Q12799 353 aa17.66■□□□□ 0.42
TUBE1-208ENST00000604743 SLF2Q8IX21 1173 aa17.66■□□□□ 0.42
TUBE1-208ENST00000604743 KIF1BPQ96EK5 621 aa17.66■□□□□ 0.42
TUBE1-208ENST00000604743 TEPSINQ96N21 525 aa17.66■□□□□ 0.42
TUBE1-208ENST00000604743 LRP2BPQ9P2M1 347 aa17.66■□□□□ 0.42
TUBE1-208ENST00000604743 TSKSQ9UJT2 592 aa17.66■□□□□ 0.42
TUBE1-208ENST00000604743 USP2O75604 605 aaPredicted RBP17.65■□□□□ 0.42
TUBE1-208ENST00000604743 IREB2P48200 963 aaKnown RBP17.65■□□□□ 0.42
TUBE1-208ENST00000604743 LBX1P52954 281 aa17.65■□□□□ 0.42
TUBE1-208ENST00000604743 COL13A1Q5TAT6 717 aaPredicted RBP17.65■□□□□ 0.42
TUBE1-208ENST00000604743 CLASRPQ8N2M8 674 aaKnown RBP17.65■□□□□ 0.42
TUBE1-208ENST00000604743 BTDP43251 543 aa17.64■□□□□ 0.41
TUBE1-208ENST00000604743 ZAP70P43403 619 aa17.64■□□□□ 0.41
TUBE1-208ENST00000604743 NFIAQ12857 509 aa17.64■□□□□ 0.41
TUBE1-208ENST00000604743 LDLRAD1Q5T700 205 aa17.64■□□□□ 0.41
TUBE1-208ENST00000604743 FKBP1CQ5VVH2 108 aa17.64■□□□□ 0.41
TUBE1-208ENST00000604743 FAM83AQ86UY5 434 aa17.64■□□□□ 0.41
TUBE1-208ENST00000604743 SLC10A4Q96EP9 437 aa17.64■□□□□ 0.41
TUBE1-208ENST00000604743 CLMNQ96JQ2 1002 aa17.64■□□□□ 0.41
TUBE1-208ENST00000604743 NDUFB9Q9Y6M9 179 aa17.64■□□□□ 0.41
TUBE1-208ENST00000604743 OTOFQ9HC10 1997 aa17.64■□□□□ 0.41
TUBE1-208ENST00000604743 RAB11FIP3O75154 756 aa17.63■□□□□ 0.41
TUBE1-208ENST00000604743 CYP2E1P05181 493 aaPredicted RBP17.63■□□□□ 0.41
TUBE1-208ENST00000604743 LDHCP07864 332 aa17.63■□□□□ 0.41
TUBE1-208ENST00000604743 IFIT2P09913 472 aaKnown RBP17.63■□□□□ 0.41
TUBE1-208ENST00000604743 HSPA8P11142 646 aaKnown RBP17.63■□□□□ 0.41
TUBE1-208ENST00000604743 GSTO1P78417 241 aa17.63■□□□□ 0.41
TUBE1-208ENST00000604743 MAP3K11Q16584 847 aa17.63■□□□□ 0.41
TUBE1-208ENST00000604743 ZNF384Q8TF68 577 aa17.63■□□□□ 0.41
TUBE1-208ENST00000604743 NSUN4Q96CB9 384 aaKnown RBP17.63■□□□□ 0.41
TUBE1-208ENST00000604743 CSRNP1Q96S65 589 aa17.63■□□□□ 0.41
TUBE1-208ENST00000604743 CRBNQ96SW2 442 aa17.63■□□□□ 0.41
TUBE1-208ENST00000604743 MROH7-TTC4A0A0A0MT08 1334 aa17.63■□□□□ 0.41
TUBE1-208ENST00000604743 GAKO14976 1311 aa17.63■□□□□ 0.41
TUBE1-208ENST00000604743 FAM151AQ8WW52 585 aa17.62■□□□□ 0.41
TUBE1-208ENST00000604743 FAM163AQ96GL9 167 aaPredicted RBP17.62■□□□□ 0.41
TUBE1-208ENST00000604743 ZNF512BQ96KM6 892 aaPredicted RBP17.62■□□□□ 0.41
TUBE1-208ENST00000604743 FAM198AQ9UFP1 575 aa17.62■□□□□ 0.41
TUBE1-208ENST00000604743 SMARCA5O60264 1052 aaPredicted RBP17.61■□□□□ 0.41
TUBE1-208ENST00000604743 RGS3P49796 1198 aa17.61■□□□□ 0.41
TUBE1-208ENST00000604743 PICALMQ13492 652 aa17.61■□□□□ 0.41
TUBE1-208ENST00000604743 NAA16Q6N069 864 aaPredicted RBP17.61■□□□□ 0.41
TUBE1-208ENST00000604743 MIGA2Q7L4E1 593 aa17.61■□□□□ 0.41
TUBE1-208ENST00000604743 ANKRD13AQ8IZ07 590 aa17.61■□□□□ 0.41
TUBE1-208ENST00000604743 PIH1D3Q9NQM4 214 aaKnown RBP17.61■□□□□ 0.41
TUBE1-208ENST00000604743 CASP8AP2Q9UKL3 1982 aa17.6■□□□□ 0.41
TUBE1-208ENST00000604743 GPR75-ASB3A0A0A6YYF3 556 aa17.6■□□□□ 0.41
TUBE1-208ENST00000604743 SPRYD7Q5W111 196 aa17.6■□□□□ 0.41
TUBE1-208ENST00000604743 ZFPM1Q8IX07 1006 aa17.6■□□□□ 0.41
TUBE1-208ENST00000604743 ELP3Q9H9T3 547 aa17.6■□□□□ 0.41
TUBE1-208ENST00000604743 MAST2Q6P0Q8 1798 aa17.6■□□□□ 0.41
TUBE1-208ENST00000604743 TRPA1O75762 1119 aa17.59■□□□□ 0.41
TUBE1-208ENST00000604743 IDH1O75874 414 aaKnown RBP17.59■□□□□ 0.41
TUBE1-208ENST00000604743 MAP3K9P80192 1104 aa17.59■□□□□ 0.41
TUBE1-208ENST00000604743 ZSCAN29Q8IWY8 852 aaPredicted RBP17.59■□□□□ 0.41
TUBE1-208ENST00000604743 HOOK2Q96ED9 719 aa17.59■□□□□ 0.41
TUBE1-208ENST00000604743 NOL10Q9BSC4 688 aaKnown RBP17.59■□□□□ 0.41
TUBE1-208ENST00000604743 LRRCC1Q9C099 1032 aa17.59■□□□□ 0.41
TUBE1-208ENST00000604743 ANTXR1Q9H6X2 564 aa17.59■□□□□ 0.41
TUBE1-208ENST00000604743 RNF186Q9NXI6 227 aa17.59■□□□□ 0.41
TUBE1-208ENST00000604743 PCDHB15Q9Y5E8 787 aa17.59■□□□□ 0.41
TUBE1-208ENST00000604743 DOCK2Q92608 1830 aa17.58■□□□□ 0.41
TUBE1-208ENST00000604743 RPAP1Q9BWH6 1393 aaPredicted RBP17.58■□□□□ 0.4
TUBE1-208ENST00000604743 CA12O43570 354 aa17.58■□□□□ 0.4
TUBE1-208ENST00000604743 DCAF15Q66K64 600 aa17.58■□□□□ 0.4
TUBE1-208ENST00000604743 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.58■□□□□ 0.4
TUBE1-208ENST00000604743 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.58■□□□□ 0.4
TUBE1-208ENST00000604743 WNK4Q96J92 1243 aa17.58■□□□□ 0.4
TUBE1-208ENST00000604743 IDI2Q9BXS1 227 aa17.58■□□□□ 0.4
TUBE1-208ENST00000604743 DDX4Q9NQI0 724 aaKnown RBP17.58■□□□□ 0.4
TUBE1-208ENST00000604743 PRDM10Q9NQV6 1147 aa17.58■□□□□ 0.4
TUBE1-208ENST00000604743 AATFQ9NY61 560 aaKnown RBP eCLIP17.58■□□□□ 0.4
TUBE1-208ENST00000604743 CSADQ9Y600 493 aa17.58■□□□□ 0.4
TUBE1-208ENST00000604743 UNCXA6NJT0 531 aa17.57■□□□□ 0.4
TUBE1-208ENST00000604743 WDHD1O75717 1129 aaPredicted RBP17.57■□□□□ 0.4
TUBE1-208ENST00000604743 RHBDL3P58872 404 aa17.57■□□□□ 0.4
TUBE1-208ENST00000604743 VGLL4Q14135 290 aa17.57■□□□□ 0.4
TUBE1-208ENST00000604743 REM2Q8IYK8 340 aaPredicted RBP17.57■□□□□ 0.4
TUBE1-208ENST00000604743 ZKSCAN4Q969J2 545 aaPredicted RBP17.57■□□□□ 0.4
TUBE1-208ENST00000604743 WRNIP1Q96S55 665 aa17.57■□□□□ 0.4
TUBE1-208ENST00000604743 DNAJC2Q99543 621 aaKnown RBP17.57■□□□□ 0.4
TUBE1-208ENST00000604743 ZNF341Q9BYN7 854 aa17.57■□□□□ 0.4
TUBE1-208ENST00000604743 ENTPD3O75355 529 aa17.56■□□□□ 0.4
TUBE1-208ENST00000604743 CYP7A1P22680 504 aa17.56■□□□□ 0.4
TUBE1-208ENST00000604743 SREBF2Q12772 1141 aa17.56■□□□□ 0.4
TUBE1-208ENST00000604743 ADGRA1Q86SQ6 560 aa17.56■□□□□ 0.4
TUBE1-208ENST00000604743 TEX11Q8IYF3 940 aa17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 94.6 ms