RNA–Protein interactions for RNA: ENST00000604164.5

CCDC12-209, Transcript of coiled-coil domain containing 12, humanhuman

TSL 3

Gene CCDC12, Length 399 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-209ENST00000604164 AOX1Q06278 1338 aa14.15□□□□□ -0.15
CCDC12-209ENST00000604164 RPAP1Q9BWH6 1393 aaPredicted RBP14.14□□□□□ -0.15
CCDC12-209ENST00000604164 SREBF2Q12772 1141 aa14.14□□□□□ -0.15
CCDC12-209ENST00000604164 DCAF15Q66K64 600 aa14.14□□□□□ -0.15
CCDC12-209ENST00000604164 CDC42EP5Q6NZY7 148 aa14.14□□□□□ -0.15
CCDC12-209ENST00000604164 ANKRD13AQ8IZ07 590 aa14.14□□□□□ -0.15
CCDC12-209ENST00000604164 RHPN1Q8TCX5 695 aa14.14□□□□□ -0.15
CCDC12-209ENST00000604164 DBNDD2Q9BQY9 259 aa14.14□□□□□ -0.15
CCDC12-209ENST00000604164 NOL10Q9BSC4 688 aaKnown RBP14.14□□□□□ -0.15
CCDC12-209ENST00000604164 TMEM39BQ9GZU3 492 aa14.14□□□□□ -0.15
CCDC12-209ENST00000604164 USP40Q9NVE5 1235 aa14.14□□□□□ -0.15
CCDC12-209ENST00000604164 SAGE1Q9NXZ1 904 aa14.14□□□□□ -0.15
CCDC12-209ENST00000604164 GAKO14976 1311 aa14.14□□□□□ -0.15
CCDC12-209ENST00000604164 MCAMP43121 646 aa14.13□□□□□ -0.15
CCDC12-209ENST00000604164 MECOMQ03112 1051 aa14.13□□□□□ -0.15
CCDC12-209ENST00000604164 C20orf194Q5TEA3 1177 aa14.13□□□□□ -0.15
CCDC12-209ENST00000604164 TMED8Q6PL24 325 aaPredicted RBP14.13□□□□□ -0.15
CCDC12-209ENST00000604164 AACSQ86V21 672 aa14.13□□□□□ -0.15
CCDC12-209ENST00000604164 FAM151AQ8WW52 585 aa14.13□□□□□ -0.15
CCDC12-209ENST00000604164 TEPSINQ96N21 525 aa14.13□□□□□ -0.15
CCDC12-209ENST00000604164 RAI14Q9P0K7 980 aa14.13□□□□□ -0.15
CCDC12-209ENST00000604164 MROH7-TTC4A0A0A0MT08 1334 aa14.13□□□□□ -0.15
CCDC12-209ENST00000604164 USP2O75604 605 aaPredicted RBP14.12□□□□□ -0.15
CCDC12-209ENST00000604164 IFIT2P09913 472 aaKnown RBP14.12□□□□□ -0.15
CCDC12-209ENST00000604164 ZBTB48P10074 688 aaPredicted RBP14.12□□□□□ -0.15
CCDC12-209ENST00000604164 HSPA8P11142 646 aaKnown RBP14.12□□□□□ -0.15
CCDC12-209ENST00000604164 LBX1P52954 281 aa14.12□□□□□ -0.15
CCDC12-209ENST00000604164 CACNB3P54284 484 aa14.12□□□□□ -0.15
CCDC12-209ENST00000604164 INHBEP58166 350 aa14.12□□□□□ -0.15
CCDC12-209ENST00000604164 EAF2Q96CJ1 260 aaPredicted RBP14.12□□□□□ -0.15
CCDC12-209ENST00000604164 CCDC8Q9H0W5 538 aaPredicted RBP14.12□□□□□ -0.15
CCDC12-209ENST00000604164 DBNLQ9UJU6 430 aaKnown RBP14.12□□□□□ -0.15
CCDC12-209ENST00000604164 CSADQ9Y600 493 aa14.12□□□□□ -0.15
CCDC12-209ENST00000604164 GPR75-ASB3A0A0A6YYF3 556 aa14.11□□□□□ -0.15
CCDC12-209ENST00000604164 SSC5DA1L4H1 1573 aa14.11□□□□□ -0.15
CCDC12-209ENST00000604164 ENTPD3O75355 529 aa14.11□□□□□ -0.15
CCDC12-209ENST00000604164 BAG3O95817 575 aa14.11□□□□□ -0.15
CCDC12-209ENST00000604164 PLCG2P16885 1265 aa14.11□□□□□ -0.15
CCDC12-209ENST00000604164 BTDP43251 543 aa14.11□□□□□ -0.15
CCDC12-209ENST00000604164 RRP1P56182 461 aaKnown RBP14.11□□□□□ -0.15
CCDC12-209ENST00000604164 SPRYD7Q5W111 196 aa14.11□□□□□ -0.15
CCDC12-209ENST00000604164 PI16Q6UXB8 463 aa14.11□□□□□ -0.15
CCDC12-209ENST00000604164 SIRT2Q8IXJ6 389 aa14.11□□□□□ -0.15
CCDC12-209ENST00000604164 NSUN4Q96CB9 384 aaKnown RBP14.11□□□□□ -0.15
CCDC12-209ENST00000604164 CSRNP1Q96S65 589 aa14.11□□□□□ -0.15
CCDC12-209ENST00000604164 IDI2Q9BXS1 227 aa14.11□□□□□ -0.15
CCDC12-209ENST00000604164 MANSC4A6NHS7 340 aaPredicted RBP14.1□□□□□ -0.15
CCDC12-209ENST00000604164 MAP3K9P80192 1104 aa14.1□□□□□ -0.15
CCDC12-209ENST00000604164 COL13A1Q5TAT6 717 aaPredicted RBP14.1□□□□□ -0.15
CCDC12-209ENST00000604164 NAA16Q6N069 864 aaPredicted RBP14.1□□□□□ -0.15
CCDC12-209ENST00000604164 TBC1D9Q6ZT07 1266 aa14.1□□□□□ -0.15
CCDC12-209ENST00000604164 CERS3Q8IU89 383 aa14.1□□□□□ -0.15
CCDC12-209ENST00000604164 ZIC5Q96T25 663 aa14.1□□□□□ -0.15
CCDC12-209ENST00000604164 ZNF341Q9BYN7 854 aa14.1□□□□□ -0.15
CCDC12-209ENST00000604164 APBB1O00213 710 aa14.09□□□□□ -0.15
CCDC12-209ENST00000604164 NPM3O75607 178 aaKnown RBP14.09□□□□□ -0.15
CCDC12-209ENST00000604164 ALDH1A1P00352 501 aa14.09□□□□□ -0.15
CCDC12-209ENST00000604164 TM4SF4P48230 202 aa14.09□□□□□ -0.15
CCDC12-209ENST00000604164 TCP10Q12799 353 aa14.09□□□□□ -0.15
CCDC12-209ENST00000604164 TTF1Q15361 905 aaPredicted RBP14.09□□□□□ -0.15
CCDC12-209ENST00000604164 OTUD7BQ6GQQ9 843 aa14.09□□□□□ -0.15
CCDC12-209ENST00000604164 TNS4Q8IZW8 715 aa14.09□□□□□ -0.15
CCDC12-209ENST00000604164 WNK4Q96J92 1243 aa14.09□□□□□ -0.15
CCDC12-209ENST00000604164 LRRCC1Q9C099 1032 aa14.09□□□□□ -0.15
CCDC12-209ENST00000604164 IL1RAPL2Q9NP60 686 aa14.09□□□□□ -0.15
CCDC12-209ENST00000604164 SNRKQ9NRH2 765 aa14.09□□□□□ -0.15
CCDC12-209ENST00000604164 TLR7Q9NYK1 1049 aaKnown RBP14.09□□□□□ -0.15
CCDC12-209ENST00000604164 MYH2Q9UKX2 1941 aa14.08□□□□□ -0.16
CCDC12-209ENST00000604164 CYP2E1P05181 493 aaPredicted RBP14.08□□□□□ -0.16
CCDC12-209ENST00000604164 ZAP70P43403 619 aa14.08□□□□□ -0.16
CCDC12-209ENST00000604164 MAP3K12Q12852 859 aa14.08□□□□□ -0.16
CCDC12-209ENST00000604164 AAMPQ13685 434 aa14.08□□□□□ -0.16
CCDC12-209ENST00000604164 ZSCAN29Q8IWY8 852 aaPredicted RBP14.08□□□□□ -0.16
CCDC12-209ENST00000604164 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.08□□□□□ -0.16
CCDC12-209ENST00000604164 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.08□□□□□ -0.16
CCDC12-209ENST00000604164 CLMNQ96JQ2 1002 aa14.08□□□□□ -0.16
CCDC12-209ENST00000604164 WRNIP1Q96S55 665 aa14.08□□□□□ -0.16
CCDC12-209ENST00000604164 RNF186Q9NXI6 227 aa14.08□□□□□ -0.16
CCDC12-209ENST00000604164 FAM198AQ9UFP1 575 aa14.08□□□□□ -0.16
CCDC12-209ENST00000604164 FZD1Q9UP38 647 aa14.08□□□□□ -0.16
CCDC12-209ENST00000604164 PCNTO95613 3336 aa14.07□□□□□ -0.16
CCDC12-209ENST00000604164 TRPA1O75762 1119 aa14.07□□□□□ -0.16
CCDC12-209ENST00000604164 RGS3P49796 1198 aa14.07□□□□□ -0.16
CCDC12-209ENST00000604164 NFIAQ12857 509 aa14.07□□□□□ -0.16
CCDC12-209ENST00000604164 MKRN3Q13064 507 aaKnown RBP14.07□□□□□ -0.16
CCDC12-209ENST00000604164 IDH1O75874 414 aaKnown RBP14.06□□□□□ -0.16
CCDC12-209ENST00000604164 VGLL4Q14135 290 aa14.06□□□□□ -0.16
CCDC12-209ENST00000604164 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.06□□□□□ -0.16
CCDC12-209ENST00000604164 CDAN1Q8IWY9 1227 aa14.06□□□□□ -0.16
CCDC12-209ENST00000604164 OPTNQ96CV9 577 aa14.06□□□□□ -0.16
CCDC12-209ENST00000604164 GPATCH3Q96I76 525 aa14.06□□□□□ -0.16
CCDC12-209ENST00000604164 ELP3Q9H9T3 547 aa14.06□□□□□ -0.16
CCDC12-209ENST00000604164 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.06□□□□□ -0.16
CCDC12-209ENST00000604164 WDHD1O75717 1129 aaPredicted RBP14.05□□□□□ -0.16
CCDC12-209ENST00000604164 GTF2A2P52657 109 aa14.05□□□□□ -0.16
CCDC12-209ENST00000604164 RHBDL3P58872 404 aa14.05□□□□□ -0.16
CCDC12-209ENST00000604164 PPP4CP60510 307 aa14.05□□□□□ -0.16
CCDC12-209ENST00000604164 PICALMQ13492 652 aa14.05□□□□□ -0.16
CCDC12-209ENST00000604164 IFFO2Q5TF58 517 aa14.05□□□□□ -0.16
CCDC12-209ENST00000604164 MIGA2Q7L4E1 593 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms