RNA–Protein interactions for RNA: ENST00000602716.5

PPFIA3-207, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 1 (best)

Gene PPFIA3, Length 2,020 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-207ENST00000602716 IARSP41252 1262 aaKnown RBP20.63■□□□□ 0.89
PPFIA3-207ENST00000602716 SCNN1DP51172 638 aa20.63■□□□□ 0.89
PPFIA3-207ENST00000602716 EVX2Q03828 476 aa20.63■□□□□ 0.89
PPFIA3-207ENST00000602716 NKX2-3Q8TAU0 364 aa20.63■□□□□ 0.89
PPFIA3-207ENST00000602716 TCEANC2Q96MN5 208 aa20.63■□□□□ 0.89
PPFIA3-207ENST00000602716 UTRNP46939 3433 aa20.63■□□□□ 0.89
PPFIA3-207ENST00000602716 PATL2C9JE40 543 aaKnown RBP20.63■□□□□ 0.89
PPFIA3-207ENST00000602716 STRIP1Q5VSL9 837 aa20.63■□□□□ 0.89
PPFIA3-207ENST00000602716 NOL8Q76FK4 1167 aaKnown RBP20.63■□□□□ 0.89
PPFIA3-207ENST00000602716 TBC1D10CQ8IV04 446 aa20.63■□□□□ 0.89
PPFIA3-207ENST00000602716 SH3RF3Q8TEJ3 882 aaPredicted RBP20.63■□□□□ 0.89
PPFIA3-207ENST00000602716 TTF2Q9UNY4 1162 aaKnown RBP20.63■□□□□ 0.89
PPFIA3-207ENST00000602716 GAKO14976 1311 aa20.62■□□□□ 0.89
PPFIA3-207ENST00000602716 BTDP43251 543 aa20.62■□□□□ 0.89
PPFIA3-207ENST00000602716 TSGA10IPQ3SY00 556 aa20.62■□□□□ 0.89
PPFIA3-207ENST00000602716 TTC14Q96N46 770 aa20.62■□□□□ 0.89
PPFIA3-207ENST00000602716 DAGLAQ9Y4D2 1042 aa20.62■□□□□ 0.89
PPFIA3-207ENST00000602716 PCDHAC2Q9Y5I4 1007 aa20.62■□□□□ 0.89
PPFIA3-207ENST00000602716 TACC3Q9Y6A5 838 aa20.62■□□□□ 0.89
PPFIA3-207ENST00000602716 USP17L3A6NCW0 530 aa20.61■□□□□ 0.89
PPFIA3-207ENST00000602716 USP17L4A6NCW7 530 aa20.61■□□□□ 0.89
PPFIA3-207ENST00000602716 RAD17O75943 681 aa20.61■□□□□ 0.89
PPFIA3-207ENST00000602716 USP17L1Q7RTZ2 530 aa20.61■□□□□ 0.89
PPFIA3-207ENST00000602716 KIAA0825Q8IV33 1275 aa20.61■□□□□ 0.89
PPFIA3-207ENST00000602716 MYH2Q9UKX2 1941 aa20.61■□□□□ 0.89
PPFIA3-207ENST00000602716 ARFGEF1Q9Y6D6 1849 aa20.61■□□□□ 0.89
PPFIA3-207ENST00000602716 GSTO1P78417 241 aa20.61■□□□□ 0.89
PPFIA3-207ENST00000602716 NAPBQ9H115 298 aa20.61■□□□□ 0.89
PPFIA3-207ENST00000602716 ZSWIM6Q9HCJ5 1215 aa20.61■□□□□ 0.89
PPFIA3-207ENST00000602716 LAMA4Q16363 1823 aa20.6■□□□□ 0.89
PPFIA3-207ENST00000602716 CYP2D7A0A087X1C5 515 aa20.6■□□□□ 0.89
PPFIA3-207ENST00000602716 E7EWF7 191 aa20.6■□□□□ 0.89
PPFIA3-207ENST00000602716 GNAT2P19087 354 aa20.6■□□□□ 0.89
PPFIA3-207ENST00000602716 TDO2P48775 406 aa20.6■□□□□ 0.89
PPFIA3-207ENST00000602716 ALX1Q15699 326 aa20.6■□□□□ 0.89
PPFIA3-207ENST00000602716 LARP6Q9BRS8 491 aaKnown RBP20.6■□□□□ 0.89
PPFIA3-207ENST00000602716 SYT17Q9BSW7 474 aa20.6■□□□□ 0.89
PPFIA3-207ENST00000602716 CTNNA3Q9UI47 895 aa20.6■□□□□ 0.89
PPFIA3-207ENST00000602716 ZMYM6O95789 1325 aa20.6■□□□□ 0.89
PPFIA3-207ENST00000602716 IMMTQ16891 758 aaKnown RBP20.6■□□□□ 0.89
PPFIA3-207ENST00000602716 L1TD1Q5T7N2 865 aaKnown RBP20.6■□□□□ 0.89
PPFIA3-207ENST00000602716 TM6SF1Q9BZW5 370 aa20.6■□□□□ 0.89
PPFIA3-207ENST00000602716 INCENPQ9NQS7 918 aa20.6■□□□□ 0.89
PPFIA3-207ENST00000602716 GPR75-ASB3A0A0A6YYF3 556 aa20.59■□□□□ 0.89
PPFIA3-207ENST00000602716 PSMD14O00487 310 aa20.59■□□□□ 0.89
PPFIA3-207ENST00000602716 CTDSPL2Q05D32 466 aa20.59■□□□□ 0.89
PPFIA3-207ENST00000602716 NIM1KQ8IY84 436 aa20.59■□□□□ 0.89
PPFIA3-207ENST00000602716 TIAM2Q8IVF5 1701 aa20.59■□□□□ 0.89
PPFIA3-207ENST00000602716 ST18O60284 1047 aa20.58■□□□□ 0.89
PPFIA3-207ENST00000602716 RHBDL3P58872 404 aa20.58■□□□□ 0.89
PPFIA3-207ENST00000602716 RUFY3Q7L099 469 aa20.58■□□□□ 0.89
PPFIA3-207ENST00000602716 SUGT1Q9Y2Z0 365 aa20.58■□□□□ 0.89
PPFIA3-207ENST00000602716 PSME4Q14997 1843 aa20.58■□□□□ 0.89
PPFIA3-207ENST00000602716 K7ELQ4 463 aaPredicted RBP20.58■□□□□ 0.88
PPFIA3-207ENST00000602716 AK2P54819 239 aa20.58■□□□□ 0.88
PPFIA3-207ENST00000602716 PPP4CP60510 307 aa20.58■□□□□ 0.88
PPFIA3-207ENST00000602716 SLC4A8Q2Y0W8 1093 aa20.58■□□□□ 0.88
PPFIA3-207ENST00000602716 STK11IPQ8N1F8 1099 aa20.58■□□□□ 0.88
PPFIA3-207ENST00000602716 FAM163AQ96GL9 167 aaPredicted RBP20.58■□□□□ 0.88
PPFIA3-207ENST00000602716 NEK1Q96PY6 1258 aa20.58■□□□□ 0.88
PPFIA3-207ENST00000602716 CRNKL1Q9BZJ0 848 aaKnown RBP20.58■□□□□ 0.88
PPFIA3-207ENST00000602716 DCP1AQ9NPI6 582 aaPredicted RBP20.58■□□□□ 0.88
PPFIA3-207ENST00000602716 ZBTB12Q9Y330 459 aaPredicted RBP20.58■□□□□ 0.88
PPFIA3-207ENST00000602716 NEDD4P46934 1319 aa20.58■□□□□ 0.88
PPFIA3-207ENST00000602716 ZNF213O14771 459 aa20.57■□□□□ 0.88
PPFIA3-207ENST00000602716 IGSF3O75054 1194 aa20.57■□□□□ 0.88
PPFIA3-207ENST00000602716 LDHCP07864 332 aa20.57■□□□□ 0.88
PPFIA3-207ENST00000602716 CYP2D6P10635 497 aa20.57■□□□□ 0.88
PPFIA3-207ENST00000602716 RPS6KB1P23443 525 aa20.57■□□□□ 0.88
PPFIA3-207ENST00000602716 TMED8Q6PL24 325 aaPredicted RBP20.57■□□□□ 0.88
PPFIA3-207ENST00000602716 BLOC1S2Q6QNY1 142 aa20.57■□□□□ 0.88
PPFIA3-207ENST00000602716 LRRC2Q9BYS8 371 aa20.57■□□□□ 0.88
PPFIA3-207ENST00000602716 CIZ1Q9ULV3 898 aaPredicted RBP20.57■□□□□ 0.88
PPFIA3-207ENST00000602716 CYP46A1Q9Y6A2 500 aa20.57■□□□□ 0.88
PPFIA3-207ENST00000602716 LTBP3Q9NS15 1303 aa20.57■□□□□ 0.88
PPFIA3-207ENST00000602716 FKBP1AP62942 108 aaKnown RBP20.56■□□□□ 0.88
PPFIA3-207ENST00000602716 KRT32Q14532 448 aa20.56■□□□□ 0.88
PPFIA3-207ENST00000602716 NACAP1Q9BZK3 213 aa20.56■□□□□ 0.88
PPFIA3-207ENST00000602716 ZNRF3Q9ULT6 936 aa20.56■□□□□ 0.88
PPFIA3-207ENST00000602716 BAZ2AQ9UIF9 1905 aaKnown RBP20.56■□□□□ 0.88
PPFIA3-207ENST00000602716 VPS33BQ9H267 617 aa20.56■□□□□ 0.88
PPFIA3-207ENST00000602716 PDRG1Q9NUG6 133 aa20.56■□□□□ 0.88
PPFIA3-207ENST00000602716 MKRN1Q9UHC7 482 aaKnown RBP20.56■□□□□ 0.88
PPFIA3-207ENST00000602716 DDX11L8A8MPP1 907 aa20.55■□□□□ 0.88
PPFIA3-207ENST00000602716 TRAK2O60296 914 aa20.55■□□□□ 0.88
PPFIA3-207ENST00000602716 CRKP46108 304 aa20.55■□□□□ 0.88
PPFIA3-207ENST00000602716 CXCL9Q07325 125 aa20.55■□□□□ 0.88
PPFIA3-207ENST00000602716 CTR9Q6PD62 1173 aa20.55■□□□□ 0.88
PPFIA3-207ENST00000602716 CHST3Q7LGC8 479 aa20.55■□□□□ 0.88
PPFIA3-207ENST00000602716 TGFBRAP1Q8WUH2 860 aa20.55■□□□□ 0.88
PPFIA3-207ENST00000602716 DDX60LQ5H9U9 1706 aaKnown RBP20.55■□□□□ 0.88
PPFIA3-207ENST00000602716 FSD2A1L4K1 749 aa20.54■□□□□ 0.88
PPFIA3-207ENST00000602716 LARGE1O95461 756 aa20.54■□□□□ 0.88
PPFIA3-207ENST00000602716 BAG3O95817 575 aa20.54■□□□□ 0.88
PPFIA3-207ENST00000602716 YBX3P16989 372 aaKnown RBP eCLIP20.54■□□□□ 0.88
PPFIA3-207ENST00000602716 PSMA5P28066 241 aa20.54■□□□□ 0.88
PPFIA3-207ENST00000602716 APOBEC3HQ6NTF7 200 aaKnown RBP20.54■□□□□ 0.88
PPFIA3-207ENST00000602716 RSBN1LQ6PCB5 846 aaPredicted RBP20.54■□□□□ 0.88
PPFIA3-207ENST00000602716 MAPKAPK5Q8IW41 473 aa20.54■□□□□ 0.88
PPFIA3-207ENST00000602716 FOXD4L1Q9NU39 408 aa20.54■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms