RNA–Protein interactions for RNA: ENST00000596378.1

SRRM1-222, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 1 (best)

Gene SRRM1, Length 2,314 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-222ENST00000596378 BARGINQ6ZT62 677 aa26.46■■□□□ 1.83
SRRM1-222ENST00000596378 LINC00301Q8NCQ3 95 aa26.46■■□□□ 1.83
SRRM1-222ENST00000596378 RTL9Q8NET4 1388 aa26.46■■□□□ 1.83
SRRM1-222ENST00000596378 MYSM1Q5VVJ2 828 aa26.45■■□□□ 1.83
SRRM1-222ENST00000596378 C11orf57Q6ZUT1 292 aaPredicted RBP26.45■■□□□ 1.83
SRRM1-222ENST00000596378 CICQ96RK0 1608 aaPredicted RBP26.45■■□□□ 1.82
SRRM1-222ENST00000596378 A0A1B0GVL5 298 aa26.45■■□□□ 1.82
SRRM1-222ENST00000596378 KINO60870 393 aaKnown RBP26.45■■□□□ 1.82
SRRM1-222ENST00000596378 KIF23Q02241 960 aaPredicted RBP26.45■■□□□ 1.82
SRRM1-222ENST00000596378 STK38Q15208 465 aa26.45■■□□□ 1.82
SRRM1-222ENST00000596378 TMEM67Q5HYA8 995 aa26.45■■□□□ 1.82
SRRM1-222ENST00000596378 BICDL1Q6ZP65 573 aa26.45■■□□□ 1.82
SRRM1-222ENST00000596378 KCNF1Q9H3M0 494 aa26.45■■□□□ 1.82
SRRM1-222ENST00000596378 ZSWIM5Q9P217 1185 aa26.45■■□□□ 1.82
SRRM1-222ENST00000596378 BCL9LQ86UU0 1499 aa26.45■■□□□ 1.82
SRRM1-222ENST00000596378 BCORQ6W2J9 1755 aa26.44■■□□□ 1.82
SRRM1-222ENST00000596378 UBE2Q2LH0YL09 131 aa26.44■■□□□ 1.82
SRRM1-222ENST00000596378 ALG1Q9BT22 464 aa26.44■■□□□ 1.82
SRRM1-222ENST00000596378 LRP2BPQ9P2M1 347 aa26.44■■□□□ 1.82
SRRM1-222ENST00000596378 SLC4A4Q9Y6R1 1079 aa26.44■■□□□ 1.82
SRRM1-222ENST00000596378 ECM29Q5VYK3 1845 aa26.44■■□□□ 1.82
SRRM1-222ENST00000596378 PTF1AQ7RTS3 328 aa26.44■■□□□ 1.82
SRRM1-222ENST00000596378 TMEM87BQ96K49 555 aa26.44■■□□□ 1.82
SRRM1-222ENST00000596378 ZNF652Q9Y2D9 606 aa26.44■■□□□ 1.82
SRRM1-222ENST00000596378 ZBTB43O43298 467 aa26.43■■□□□ 1.82
SRRM1-222ENST00000596378 GYG1P46976 350 aa26.43■■□□□ 1.82
SRRM1-222ENST00000596378 RRP12Q5JTH9 1297 aaKnown RBP26.43■■□□□ 1.82
SRRM1-222ENST00000596378 TDRD7Q8NHU6 1098 aaKnown RBP26.43■■□□□ 1.82
SRRM1-222ENST00000596378 PIBF1Q8WXW3 757 aa26.43■■□□□ 1.82
SRRM1-222ENST00000596378 MRPS27Q92552 414 aaKnown RBP26.43■■□□□ 1.82
SRRM1-222ENST00000596378 TDO2P48775 406 aa26.43■■□□□ 1.82
SRRM1-222ENST00000596378 SF3A1Q15459 793 aaKnown RBP26.43■■□□□ 1.82
SRRM1-222ENST00000596378 ADGRA1Q86SQ6 560 aa26.43■■□□□ 1.82
SRRM1-222ENST00000596378 SMARCC1Q92922 1105 aaPredicted RBP26.43■■□□□ 1.82
SRRM1-222ENST00000596378 ADALQ6DHV7 355 aa26.42■■□□□ 1.82
SRRM1-222ENST00000596378 BRAPQ7Z569 592 aa26.42■■□□□ 1.82
SRRM1-222ENST00000596378 ZKSCAN3Q9BRR0 538 aa26.42■■□□□ 1.82
SRRM1-222ENST00000596378 GOLGA8AA7E2F4 631 aa26.42■■□□□ 1.82
SRRM1-222ENST00000596378 IFIT3O14879 490 aaKnown RBP26.42■■□□□ 1.82
SRRM1-222ENST00000596378 RANBP6O60518 1105 aaKnown RBP26.42■■□□□ 1.82
SRRM1-222ENST00000596378 NDUFA8P51970 172 aa26.42■■□□□ 1.82
SRRM1-222ENST00000596378 AKNAD1Q5T1N1 836 aa26.42■■□□□ 1.82
SRRM1-222ENST00000596378 FMR1NBQ8N0W7 255 aaPredicted RBP26.42■■□□□ 1.82
SRRM1-222ENST00000596378 TOMM22Q9NS69 142 aa26.42■■□□□ 1.82
SRRM1-222ENST00000596378 FAM217BQ9NTX9 383 aaPredicted RBP26.42■■□□□ 1.82
SRRM1-222ENST00000596378 POLR3EQ9NVU0 708 aa26.42■■□□□ 1.82
SRRM1-222ENST00000596378 ABCF2Q9UG63 623 aa26.42■■□□□ 1.82
SRRM1-222ENST00000596378 CTAGE5O15320 804 aa26.41■■□□□ 1.82
SRRM1-222ENST00000596378 FBXW7Q969H0 707 aa26.41■■□□□ 1.82
SRRM1-222ENST00000596378 CDC5LQ99459 802 aaKnown RBP26.41■■□□□ 1.82
SRRM1-222ENST00000596378 CASZ1Q86V15 1759 aa26.41■■□□□ 1.82
SRRM1-222ENST00000596378 SPTLC2O15270 562 aa26.4■■□□□ 1.82
SRRM1-222ENST00000596378 NTRK3Q16288 839 aa26.4■■□□□ 1.82
SRRM1-222ENST00000596378 TRIM5Q9C035 493 aa26.4■■□□□ 1.82
SRRM1-222ENST00000596378 TPM2P07951 284 aa26.4■■□□□ 1.82
SRRM1-222ENST00000596378 NOLC1Q14978 699 aaKnown RBP eCLIP26.4■■□□□ 1.82
SRRM1-222ENST00000596378 KRT40Q6A162 431 aa26.4■■□□□ 1.82
SRRM1-222ENST00000596378 SYNE3Q6ZMZ3 975 aa26.4■■□□□ 1.82
SRRM1-222ENST00000596378 MFSD6Q6ZSS7 791 aa26.4■■□□□ 1.82
SRRM1-222ENST00000596378 SGMS1Q86VZ5 419 aa26.4■■□□□ 1.82
SRRM1-222ENST00000596378 TIAM2Q8IVF5 1701 aa26.4■■□□□ 1.82
SRRM1-222ENST00000596378 STX1AQ16623 288 aa26.39■■□□□ 1.82
SRRM1-222ENST00000596378 PYCARDQ9ULZ3 195 aa26.39■■□□□ 1.82
SRRM1-222ENST00000596378 COL1A1P02452 1464 aaPredicted RBP26.39■■□□□ 1.82
SRRM1-222ENST00000596378 CDKL5O76039 1030 aa26.39■■□□□ 1.81
SRRM1-222ENST00000596378 YEATS4O95619 227 aa26.39■■□□□ 1.81
SRRM1-222ENST00000596378 CYP7A1P22680 504 aa26.39■■□□□ 1.81
SRRM1-222ENST00000596378 PTGS1P23219 599 aa26.39■■□□□ 1.81
SRRM1-222ENST00000596378 IQCB1Q15051 598 aa26.39■■□□□ 1.81
SRRM1-222ENST00000596378 VPS37DQ86XT2 251 aa26.39■■□□□ 1.81
SRRM1-222ENST00000596378 ANKRD18AQ8IVF6 992 aa26.39■■□□□ 1.81
SRRM1-222ENST00000596378 KCNG4Q8TDN1 519 aa26.39■■□□□ 1.81
SRRM1-222ENST00000596378 SLC12A7Q9Y666 1083 aa26.39■■□□□ 1.81
SRRM1-222ENST00000596378 PNPLA7Q6ZV29 1317 aa26.38■■□□□ 1.81
SRRM1-222ENST00000596378 A0A1B0GUL6 1792 aa26.38■■□□□ 1.81
SRRM1-222ENST00000596378 ZNF75DP51815 510 aa26.38■■□□□ 1.81
SRRM1-222ENST00000596378 ANO1Q5XXA6 986 aa26.38■■□□□ 1.81
SRRM1-222ENST00000596378 SDR42E1Q8WUS8 393 aa26.38■■□□□ 1.81
SRRM1-222ENST00000596378 A0A1W2PQ27 194 aa26.38■■□□□ 1.81
SRRM1-222ENST00000596378 A0A1W2PQ64 194 aa26.38■■□□□ 1.81
SRRM1-222ENST00000596378 A0A1W2PQD8 194 aa26.38■■□□□ 1.81
SRRM1-222ENST00000596378 SMIM22K7EJ46 135 aa26.38■■□□□ 1.81
SRRM1-222ENST00000596378 CLEC4GQ6UXB4 293 aa26.38■■□□□ 1.81
SRRM1-222ENST00000596378 PLA2G4DQ86XP0 818 aa26.38■■□□□ 1.81
SRRM1-222ENST00000596378 NACAP1Q9BZK3 213 aa26.38■■□□□ 1.81
SRRM1-222ENST00000596378 NRBP1Q9UHY1 535 aa26.38■■□□□ 1.81
SRRM1-222ENST00000596378 CCDC69A6NI79 296 aa26.37■■□□□ 1.81
SRRM1-222ENST00000596378 IARSP41252 1262 aaKnown RBP26.37■■□□□ 1.81
SRRM1-222ENST00000596378 CPLX2Q6PUV4 134 aaKnown RBP26.37■■□□□ 1.81
SRRM1-222ENST00000596378 MARCKSP29966 332 aaPredicted RBP26.37■■□□□ 1.81
SRRM1-222ENST00000596378 LIFRP42702 1097 aa26.37■■□□□ 1.81
SRRM1-222ENST00000596378 TBC1D9BQ66K14 1250 aa26.37■■□□□ 1.81
SRRM1-222ENST00000596378 DRC7Q8IY82 874 aa26.37■■□□□ 1.81
SRRM1-222ENST00000596378 CELF1Q92879 486 aaKnown RBP26.37■■□□□ 1.81
SRRM1-222ENST00000596378 SLC26A6Q9BXS9 759 aa26.37■■□□□ 1.81
SRRM1-222ENST00000596378 CNNM2Q9H8M5 875 aa26.37■■□□□ 1.81
SRRM1-222ENST00000596378 RAI14Q9P0K7 980 aa26.37■■□□□ 1.81
SRRM1-222ENST00000596378 GOLGA6L6A8MZA4 724 aa26.36■■□□□ 1.81
SRRM1-222ENST00000596378 GNAT2P19087 354 aa26.36■■□□□ 1.81
SRRM1-222ENST00000596378 DNTTIP2Q5QJE6 756 aaKnown RBP26.36■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms