RNA–Protein interactions for RNA: ENST00000594298.5

SHKBP1-203, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 716 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-203ENST00000594298 CIAO1O76071 339 aa21.86■■□□□ 1.09
SHKBP1-203ENST00000594298 ZKSCAN4Q969J2 545 aaPredicted RBP21.86■■□□□ 1.09
SHKBP1-203ENST00000594298 NOB1Q9ULX3 412 aaKnown RBP21.86■■□□□ 1.09
SHKBP1-203ENST00000594298 IRF6O14896 467 aa21.85■■□□□ 1.09
SHKBP1-203ENST00000594298 IPO8O15397 1037 aaKnown RBP21.85■■□□□ 1.09
SHKBP1-203ENST00000594298 WDHD1O75717 1129 aaPredicted RBP21.85■■□□□ 1.09
SHKBP1-203ENST00000594298 PPIL2Q13356 520 aa21.85■■□□□ 1.09
SHKBP1-203ENST00000594298 SNAPC2Q13487 334 aa21.85■■□□□ 1.09
SHKBP1-203ENST00000594298 FAM151AQ8WW52 585 aa21.85■■□□□ 1.09
SHKBP1-203ENST00000594298 ZBTB22O15209 634 aa21.84■■□□□ 1.09
SHKBP1-203ENST00000594298 TLR2O60603 784 aa21.84■■□□□ 1.09
SHKBP1-203ENST00000594298 UBTFL1P0CB47 393 aaPredicted RBP21.84■■□□□ 1.09
SHKBP1-203ENST00000594298 ARHGAP45Q92619 1136 aa21.84■■□□□ 1.09
SHKBP1-203ENST00000594298 ZNF341Q9BYN7 854 aa21.84■■□□□ 1.09
SHKBP1-203ENST00000594298 BTBD19C9JJ37 291 aa21.83■■□□□ 1.09
SHKBP1-203ENST00000594298 PPATQ06203 517 aa21.83■■□□□ 1.09
SHKBP1-203ENST00000594298 ZNF333Q96JL9 665 aa21.83■■□□□ 1.09
SHKBP1-203ENST00000594298 DAGLAQ9Y4D2 1042 aa21.83■■□□□ 1.09
SHKBP1-203ENST00000594298 SALL1Q9NSC2 1324 aa21.82■■□□□ 1.08
SHKBP1-203ENST00000594298 ATP2B3Q16720 1220 aa21.82■■□□□ 1.08
SHKBP1-203ENST00000594298 CDC42EP5Q6NZY7 148 aa21.82■■□□□ 1.08
SHKBP1-203ENST00000594298 CEP126Q9P2H0 1117 aa21.82■■□□□ 1.08
SHKBP1-203ENST00000594298 ZNF112Q9UJU3 913 aa21.82■■□□□ 1.08
SHKBP1-203ENST00000594298 HDAC5Q9UQL6 1122 aa21.82■■□□□ 1.08
SHKBP1-203ENST00000594298 RBBP6Q7Z6E9 1792 aaKnown RBP21.82■■□□□ 1.08
SHKBP1-203ENST00000594298 SEMA3EO15041 775 aa21.81■■□□□ 1.08
SHKBP1-203ENST00000594298 PRDX5P30044 214 aa21.81■■□□□ 1.08
SHKBP1-203ENST00000594298 MIGA2Q7L4E1 593 aa21.81■■□□□ 1.08
SHKBP1-203ENST00000594298 NBPF11Q86T75 865 aa21.81■■□□□ 1.08
SHKBP1-203ENST00000594298 GCC1Q96CN9 775 aa21.81■■□□□ 1.08
SHKBP1-203ENST00000594298 GNL3LQ9NVN8 582 aaKnown RBP21.81■■□□□ 1.08
SHKBP1-203ENST00000594298 PTCH2Q9Y6C5 1203 aa21.81■■□□□ 1.08
SHKBP1-203ENST00000594298 LDHBP07195 334 aaKnown RBP21.8■■□□□ 1.08
SHKBP1-203ENST00000594298 EN2P19622 333 aaPredicted RBP21.8■■□□□ 1.08
SHKBP1-203ENST00000594298 INPP5BP32019 993 aa21.8■■□□□ 1.08
SHKBP1-203ENST00000594298 IL15P40933 162 aaPredicted RBP21.8■■□□□ 1.08
SHKBP1-203ENST00000594298 LACTBP83111 547 aaPredicted RBP21.8■■□□□ 1.08
SHKBP1-203ENST00000594298 DIXDC1Q155Q3 683 aa21.8■■□□□ 1.08
SHKBP1-203ENST00000594298 SLC9C1Q4G0N8 1177 aa21.8■■□□□ 1.08
SHKBP1-203ENST00000594298 SIL1Q9H173 461 aa21.8■■□□□ 1.08
SHKBP1-203ENST00000594298 GNRH1P01148 92 aa21.79■■□□□ 1.08
SHKBP1-203ENST00000594298 NFIAQ12857 509 aa21.79■■□□□ 1.08
SHKBP1-203ENST00000594298 KIF22Q14807 665 aa21.79■■□□□ 1.08
SHKBP1-203ENST00000594298 TMEM106CQ9BVX2 250 aa21.79■■□□□ 1.08
SHKBP1-203ENST00000594298 DENND2AQ9ULE3 1009 aa21.79■■□□□ 1.08
SHKBP1-203ENST00000594298 KCNH4Q9UQ05 1017 aa21.79■■□□□ 1.08
SHKBP1-203ENST00000594298 TCP10Q12799 353 aa21.78■■□□□ 1.08
SHKBP1-203ENST00000594298 NOL9Q5SY16 702 aaKnown RBP21.78■■□□□ 1.08
SHKBP1-203ENST00000594298 COPRSQ9NQ92 184 aa21.78■■□□□ 1.08
SHKBP1-203ENST00000594298 FAM198AQ9UFP1 575 aa21.78■■□□□ 1.08
SHKBP1-203ENST00000594298 BCAR3O75815 825 aa21.77■■□□□ 1.08
SHKBP1-203ENST00000594298 PHKA1P46020 1223 aa21.77■■□□□ 1.08
SHKBP1-203ENST00000594298 PRMT2P55345 433 aa21.77■■□□□ 1.08
SHKBP1-203ENST00000594298 C17orf99Q6UX52 265 aa21.77■■□□□ 1.08
SHKBP1-203ENST00000594298 ANKRD23Q86SG2 305 aa21.77■■□□□ 1.08
SHKBP1-203ENST00000594298 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.77■■□□□ 1.08
SHKBP1-203ENST00000594298 FRAT1Q92837 279 aaPredicted RBP21.77■■□□□ 1.08
SHKBP1-203ENST00000594298 ARHGAP39Q9C0H5 1083 aa21.77■■□□□ 1.08
SHKBP1-203ENST00000594298 USP40Q9NVE5 1235 aa21.77■■□□□ 1.08
SHKBP1-203ENST00000594298 LRRFIP2Q9Y608 721 aaKnown RBP21.77■■□□□ 1.08
SHKBP1-203ENST00000594298 CENPFP49454 3210 aa21.76■■□□□ 1.07
SHKBP1-203ENST00000594298 ZGPATQ8N5A5 531 aaKnown RBP21.76■■□□□ 1.07
SHKBP1-203ENST00000594298 CCDC102BQ68D86 513 aa21.75■■□□□ 1.07
SHKBP1-203ENST00000594298 IDI2Q9BXS1 227 aa21.75■■□□□ 1.07
SHKBP1-203ENST00000594298 PA2G4Q9UQ80 394 aaKnown RBP21.75■■□□□ 1.07
SHKBP1-203ENST00000594298 PDS5AQ29RF7 1337 aaKnown RBP21.75■■□□□ 1.07
SHKBP1-203ENST00000594298 MKI67P46013 3256 aaKnown RBP21.75■■□□□ 1.07
SHKBP1-203ENST00000594298 PDHXO00330 501 aa21.74■■□□□ 1.07
SHKBP1-203ENST00000594298 MOGSQ13724 837 aa21.74■■□□□ 1.07
SHKBP1-203ENST00000594298 ZKSCAN2Q63HK3 967 aa21.74■■□□□ 1.07
SHKBP1-203ENST00000594298 ATF7IPQ6VMQ6 1270 aa21.74■■□□□ 1.07
SHKBP1-203ENST00000594298 GAKO14976 1311 aa21.74■■□□□ 1.07
SHKBP1-203ENST00000594298 ADGRA2Q96PE1 1338 aa21.74■■□□□ 1.07
SHKBP1-203ENST00000594298 ATRNL1Q5VV63 1379 aa21.74■■□□□ 1.07
SHKBP1-203ENST00000594298 BRCA2P51587 3418 aa21.73■■□□□ 1.07
SHKBP1-203ENST00000594298 MYH13Q9UKX3 1938 aa21.73■■□□□ 1.07
SHKBP1-203ENST00000594298 ENTPD3O75355 529 aa21.73■■□□□ 1.07
SHKBP1-203ENST00000594298 ZFPM1Q8IX07 1006 aa21.73■■□□□ 1.07
SHKBP1-203ENST00000594298 MEIS3Q99687 375 aa21.73■■□□□ 1.07
SHKBP1-203ENST00000594298 RFX7Q2KHR2 1363 aa21.73■■□□□ 1.07
SHKBP1-203ENST00000594298 PHF20L1A8MW92 1017 aa21.72■■□□□ 1.07
SHKBP1-203ENST00000594298 CXCL11O14625 94 aa21.72■■□□□ 1.07
SHKBP1-203ENST00000594298 ADORA1P30542 326 aa21.72■■□□□ 1.07
SHKBP1-203ENST00000594298 SLC4A8Q2Y0W8 1093 aa21.72■■□□□ 1.07
SHKBP1-203ENST00000594298 FAM163AQ96GL9 167 aaPredicted RBP21.72■■□□□ 1.07
SHKBP1-203ENST00000594298 CPA4Q9UI42 421 aa21.72■■□□□ 1.07
SHKBP1-203ENST00000594298 RASGRF1Q13972 1273 aa21.71■■□□□ 1.07
SHKBP1-203ENST00000594298 SLF2Q8IX21 1173 aa21.71■■□□□ 1.07
SHKBP1-203ENST00000594298 SH3TC2Q8TF17 1288 aa21.71■■□□□ 1.07
SHKBP1-203ENST00000594298 TRIM27P14373 513 aa21.7■■□□□ 1.06
SHKBP1-203ENST00000594298 CTGFP29279 349 aa21.7■■□□□ 1.06
SHKBP1-203ENST00000594298 PSMC4P43686 418 aa21.7■■□□□ 1.06
SHKBP1-203ENST00000594298 RGS3P49796 1198 aa21.7■■□□□ 1.06
SHKBP1-203ENST00000594298 TIMM10P62072 90 aa21.7■■□□□ 1.06
SHKBP1-203ENST00000594298 MAP3K10Q02779 954 aa21.7■■□□□ 1.06
SHKBP1-203ENST00000594298 MTX1Q13505 466 aa21.7■■□□□ 1.06
SHKBP1-203ENST00000594298 HABP4Q5JVS0 413 aaKnown RBP21.7■■□□□ 1.06
SHKBP1-203ENST00000594298 DZIP1Q86YF9 867 aaKnown RBP21.7■■□□□ 1.06
SHKBP1-203ENST00000594298 SCYL3Q8IZE3 742 aa21.7■■□□□ 1.06
SHKBP1-203ENST00000594298 SRRDQ9UH36 339 aa21.7■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms