RNA–Protein interactions for RNA: ENST00000592186.5

SMAD4-214, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 1,306 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-214ENST00000592186 RAD50Q92878 1312 aa12.82□□□□□ -0.36
SMAD4-214ENST00000592186 EPS15P42566 896 aa12.81□□□□□ -0.36
SMAD4-214ENST00000592186 BTDP43251 543 aa12.81□□□□□ -0.36
SMAD4-214ENST00000592186 NMIQ13287 307 aaPredicted RBP12.81□□□□□ -0.36
SMAD4-214ENST00000592186 KIAA1211Q6ZU35 1233 aa12.81□□□□□ -0.36
SMAD4-214ENST00000592186 OSBP2Q969R2 916 aa12.81□□□□□ -0.36
SMAD4-214ENST00000592186 ZBED3Q96IU2 234 aaPredicted RBP12.81□□□□□ -0.36
SMAD4-214ENST00000592186 PRMT6Q96LA8 375 aaPredicted RBP12.81□□□□□ -0.36
SMAD4-214ENST00000592186 FAM227BQ96M60 508 aa12.81□□□□□ -0.36
SMAD4-214ENST00000592186 CRNKL1Q9BZJ0 848 aaKnown RBP12.81□□□□□ -0.36
SMAD4-214ENST00000592186 PUS7LQ9H0K6 701 aaKnown RBP12.81□□□□□ -0.36
SMAD4-214ENST00000592186 USP40Q9NVE5 1235 aa12.81□□□□□ -0.36
SMAD4-214ENST00000592186 AATFQ9NY61 560 aaKnown RBP eCLIP12.81□□□□□ -0.36
SMAD4-214ENST00000592186 TMOD2Q9NZR1 351 aa12.81□□□□□ -0.36
SMAD4-214ENST00000592186 PSME4Q14997 1843 aa12.81□□□□□ -0.36
SMAD4-214ENST00000592186 MYH13Q9UKX3 1938 aa12.8□□□□□ -0.36
SMAD4-214ENST00000592186 KIF4BQ2VIQ3 1234 aa12.8□□□□□ -0.36
SMAD4-214ENST00000592186 RBM26Q5T8P6 1007 aaKnown RBP12.8□□□□□ -0.36
SMAD4-214ENST00000592186 FKBP1CQ5VVH2 108 aa12.8□□□□□ -0.36
SMAD4-214ENST00000592186 SAMD7Q7Z3H4 446 aa12.8□□□□□ -0.36
SMAD4-214ENST00000592186 ADGRA1Q86SQ6 560 aa12.8□□□□□ -0.36
SMAD4-214ENST00000592186 MIGA1Q8NAN2 632 aa12.8□□□□□ -0.36
SMAD4-214ENST00000592186 ZC3H15Q8WU90 426 aaKnown RBP12.8□□□□□ -0.36
SMAD4-214ENST00000592186 DDRGK1Q96HY6 314 aa12.8□□□□□ -0.36
SMAD4-214ENST00000592186 STRBPQ96SI9 672 aaKnown RBP12.8□□□□□ -0.36
SMAD4-214ENST00000592186 RIOK1Q9BRS2 568 aaKnown RBP12.8□□□□□ -0.36
SMAD4-214ENST00000592186 ESYT1Q9BSJ8 1104 aa12.8□□□□□ -0.36
SMAD4-214ENST00000592186 UTRNP46939 3433 aa12.8□□□□□ -0.36
SMAD4-214ENST00000592186 RPAP1Q9BWH6 1393 aaPredicted RBP12.8□□□□□ -0.36
SMAD4-214ENST00000592186 A0A0D9SFI3 127 aa12.79□□□□□ -0.36
SMAD4-214ENST00000592186 PATL2C9JE40 543 aaKnown RBP12.79□□□□□ -0.36
SMAD4-214ENST00000592186 WNT10BO00744 389 aa12.79□□□□□ -0.36
SMAD4-214ENST00000592186 SGSM2O43147 1006 aa12.79□□□□□ -0.36
SMAD4-214ENST00000592186 GPAA1O43292 621 aa12.79□□□□□ -0.36
SMAD4-214ENST00000592186 CAPN15O75808 1086 aa12.79□□□□□ -0.36
SMAD4-214ENST00000592186 MBD4O95243 580 aa12.79□□□□□ -0.36
SMAD4-214ENST00000592186 EPHX2P34913 555 aa12.79□□□□□ -0.36
SMAD4-214ENST00000592186 TBC1D10BQ4KMP7 808 aaPredicted RBP12.79□□□□□ -0.36
SMAD4-214ENST00000592186 CDC42EP5Q6NZY7 148 aa12.79□□□□□ -0.36
SMAD4-214ENST00000592186 GIMAP6Q6P9H5 292 aa12.79□□□□□ -0.36
SMAD4-214ENST00000592186 NACAP1Q9BZK3 213 aa12.79□□□□□ -0.36
SMAD4-214ENST00000592186 TAF1DQ9H5J8 278 aaPredicted RBP12.79□□□□□ -0.36
SMAD4-214ENST00000592186 ATP8A2Q9NTI2 1148 aa12.79□□□□□ -0.36
SMAD4-214ENST00000592186 TIAM2Q8IVF5 1701 aa12.79□□□□□ -0.36
SMAD4-214ENST00000592186 M0R2C6 588 aa12.78□□□□□ -0.36
SMAD4-214ENST00000592186 EPB41L2O43491 1005 aaKnown RBP12.78□□□□□ -0.36
SMAD4-214ENST00000592186 REC8O95072 547 aa12.78□□□□□ -0.36
SMAD4-214ENST00000592186 RHBDL3P58872 404 aa12.78□□□□□ -0.36
SMAD4-214ENST00000592186 TNFAIP1Q13829 316 aa12.78□□□□□ -0.36
SMAD4-214ENST00000592186 SPDYE2Q495Y8 402 aa12.78□□□□□ -0.36
SMAD4-214ENST00000592186 SLFNL1Q499Z3 407 aa12.78□□□□□ -0.36
SMAD4-214ENST00000592186 TEX11Q8IYF3 940 aa12.78□□□□□ -0.36
SMAD4-214ENST00000592186 SEC62Q99442 399 aaKnown RBP12.78□□□□□ -0.36
SMAD4-214ENST00000592186 IDI2Q9BXS1 227 aa12.78□□□□□ -0.36
SMAD4-214ENST00000592186 TDRD3Q9H7E2 651 aaKnown RBP12.78□□□□□ -0.36
SMAD4-214ENST00000592186 ARMT1Q9H993 441 aa12.78□□□□□ -0.36
SMAD4-214ENST00000592186 SLC4A4Q9Y6R1 1079 aa12.78□□□□□ -0.36
SMAD4-214ENST00000592186 CCDC171Q6TFL3 1326 aa12.78□□□□□ -0.36
SMAD4-214ENST00000592186 DOCK2Q92608 1830 aa12.77□□□□□ -0.36
SMAD4-214ENST00000592186 SHTN1A0MZ66 631 aa12.77□□□□□ -0.37
SMAD4-214ENST00000592186 POTECB2RU33 542 aa12.77□□□□□ -0.37
SMAD4-214ENST00000592186 ENTPD3O75355 529 aa12.77□□□□□ -0.37
SMAD4-214ENST00000592186 CHGBP05060 677 aa12.77□□□□□ -0.37
SMAD4-214ENST00000592186 APPP05067 770 aa12.77□□□□□ -0.37
SMAD4-214ENST00000592186 USP5P45974 858 aa12.77□□□□□ -0.37
SMAD4-214ENST00000592186 TNNI2P48788 182 aa12.77□□□□□ -0.37
SMAD4-214ENST00000592186 DYNLL1P63167 89 aaKnown RBP12.77□□□□□ -0.37
SMAD4-214ENST00000592186 NBPF9Q3BBW0 867 aa12.77□□□□□ -0.37
SMAD4-214ENST00000592186 LCORLQ8N3X6 602 aa12.77□□□□□ -0.37
SMAD4-214ENST00000592186 SH3RF3Q8TEJ3 882 aaPredicted RBP12.77□□□□□ -0.37
SMAD4-214ENST00000592186 RRAGCQ9HB90 399 aa12.77□□□□□ -0.37
SMAD4-214ENST00000592186 ZNF70Q9UC06 446 aaPredicted RBP12.77□□□□□ -0.37
SMAD4-214ENST00000592186 PGAP2Q9UHJ9 254 aa12.77□□□□□ -0.37
SMAD4-214ENST00000592186 CTNNA3Q9UI47 895 aa12.77□□□□□ -0.37
SMAD4-214ENST00000592186 ZNF646O15015 1829 aaPredicted RBP12.76□□□□□ -0.37
SMAD4-214ENST00000592186 ALX1Q15699 326 aa12.76□□□□□ -0.37
SMAD4-214ENST00000592186 FAM83AQ86UY5 434 aa12.76□□□□□ -0.37
SMAD4-214ENST00000592186 APOBEC3FQ8IUX4 373 aaKnown RBP12.76□□□□□ -0.37
SMAD4-214ENST00000592186 AMOTL1Q8IY63 956 aa12.76□□□□□ -0.37
SMAD4-214ENST00000592186 DCPSQ96C86 337 aaKnown RBP12.76□□□□□ -0.37
SMAD4-214ENST00000592186 DSCC1Q9BVC3 393 aa12.76□□□□□ -0.37
SMAD4-214ENST00000592186 PITPNM2Q9BZ72 1349 aa12.76□□□□□ -0.37
SMAD4-214ENST00000592186 TAOK2Q9UL54 1235 aa12.76□□□□□ -0.37
SMAD4-214ENST00000592186 GSG1L2A8MUP6 293 aa12.75□□□□□ -0.37
SMAD4-214ENST00000592186 WDHD1O75717 1129 aaPredicted RBP12.75□□□□□ -0.37
SMAD4-214ENST00000592186 EGFRP00533 1210 aa12.75□□□□□ -0.37
SMAD4-214ENST00000592186 HSPD1P10809 573 aaKnown RBP12.75□□□□□ -0.37
SMAD4-214ENST00000592186 HIRAP54198 1017 aaPredicted RBP12.75□□□□□ -0.37
SMAD4-214ENST00000592186 CCDC129Q6ZRS4 1044 aa12.75□□□□□ -0.37
SMAD4-214ENST00000592186 ZNF589Q86UQ0 364 aaPredicted RBP12.75□□□□□ -0.37
SMAD4-214ENST00000592186 TRPM4Q8TD43 1214 aa12.75□□□□□ -0.37
SMAD4-214ENST00000592186 TGFBRAP1Q8WUH2 860 aa12.75□□□□□ -0.37
SMAD4-214ENST00000592186 DHX36Q9H2U1 1008 aaKnown RBP12.75□□□□□ -0.37
SMAD4-214ENST00000592186 GPBP1L1Q9HC44 474 aaPredicted RBP12.75□□□□□ -0.37
SMAD4-214ENST00000592186 PCDHAC2Q9Y5I4 1007 aa12.75□□□□□ -0.37
SMAD4-214ENST00000592186 MAST2Q6P0Q8 1798 aa12.75□□□□□ -0.37
SMAD4-214ENST00000592186 WDR90Q96KV7 1748 aa12.75□□□□□ -0.37
SMAD4-214ENST00000592186 CLRN2A0PK11 232 aa12.74□□□□□ -0.37
SMAD4-214ENST00000592186 C8orf34Q49A92 452 aa12.74□□□□□ -0.37
SMAD4-214ENST00000592186 IFNL3Q8IZI9 196 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms