RNA–Protein interactions for RNA: ENST00000589351.5

DNMT1-220, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 672 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-220ENST00000589351 GOLGB1Q14789 3259 aaKnown RBP7.6□□□□□ -1.19
DNMT1-220ENST00000589351 PLEKHG2Q9H7P9 1386 aa7.59□□□□□ -1.19
DNMT1-220ENST00000589351 KIF20BQ96Q89 1820 aa7.59□□□□□ -1.19
DNMT1-220ENST00000589351 DCDC2BA2VCK2 349 aa7.59□□□□□ -1.19
DNMT1-220ENST00000589351 GPR37L1O60883 481 aa7.59□□□□□ -1.19
DNMT1-220ENST00000589351 PCBP4P57723 403 aaKnown RBP7.59□□□□□ -1.19
DNMT1-220ENST00000589351 CABP4P57796 275 aa7.59□□□□□ -1.19
DNMT1-220ENST00000589351 ITPK1Q13572 414 aa7.59□□□□□ -1.19
DNMT1-220ENST00000589351 TLR1Q15399 786 aa7.59□□□□□ -1.19
DNMT1-220ENST00000589351 NEUROD2Q15784 382 aa7.59□□□□□ -1.19
DNMT1-220ENST00000589351 AMOTQ4VCS5 1084 aa7.59□□□□□ -1.19
DNMT1-220ENST00000589351 NLRP8Q86W28 1048 aa7.59□□□□□ -1.19
DNMT1-220ENST00000589351 ARID3AQ99856 593 aa7.59□□□□□ -1.19
DNMT1-220ENST00000589351 AVENQ9NQS1 362 aaPredicted RBP7.59□□□□□ -1.19
DNMT1-220ENST00000589351 ADCY9O60503 1353 aa7.59□□□□□ -1.2
DNMT1-220ENST00000589351 UBR3Q6ZT12 1888 aa7.58□□□□□ -1.2
DNMT1-220ENST00000589351 A0A0G2JLW4 131 aa7.58□□□□□ -1.2
DNMT1-220ENST00000589351 DYRK3O43781 588 aa7.58□□□□□ -1.2
DNMT1-220ENST00000589351 IGSF3O75054 1194 aa7.58□□□□□ -1.2
DNMT1-220ENST00000589351 RPS6KA4O75676 772 aa7.58□□□□□ -1.2
DNMT1-220ENST00000589351 TSGA10IPQ3SY00 556 aa7.58□□□□□ -1.2
DNMT1-220ENST00000589351 C1orf141Q5JVX7 400 aa7.58□□□□□ -1.2
DNMT1-220ENST00000589351 SMIM5Q71RC9 77 aa7.58□□□□□ -1.2
DNMT1-220ENST00000589351 POLR3GLQ9BT43 218 aa7.58□□□□□ -1.2
DNMT1-220ENST00000589351 PIM2Q9P1W9 311 aa7.58□□□□□ -1.2
DNMT1-220ENST00000589351 POLKQ9UBT6 870 aa7.58□□□□□ -1.2
DNMT1-220ENST00000589351 PKD1L3Q7Z443 1732 aa7.58□□□□□ -1.2
DNMT1-220ENST00000589351 KDM2BQ8NHM5 1336 aa7.57□□□□□ -1.2
DNMT1-220ENST00000589351 TNNT2P45379 298 aaPredicted RBP7.57□□□□□ -1.2
DNMT1-220ENST00000589351 MTHFSP49914 203 aa7.57□□□□□ -1.2
DNMT1-220ENST00000589351 AMIGO3Q86WK7 504 aa7.57□□□□□ -1.2
DNMT1-220ENST00000589351 MAP2P11137 1827 aaKnown RBP7.57□□□□□ -1.2
DNMT1-220ENST00000589351 CNTNAP4Q9C0A0 1308 aa7.56□□□□□ -1.2
DNMT1-220ENST00000589351 NCAPD2Q15021 1401 aa7.56□□□□□ -1.2
DNMT1-220ENST00000589351 A0A1W2PNR3 127 aa7.56□□□□□ -1.2
DNMT1-220ENST00000589351 KHNYNO15037 678 aaKnown RBP7.56□□□□□ -1.2
DNMT1-220ENST00000589351 GYS1P13807 737 aa7.56□□□□□ -1.2
DNMT1-220ENST00000589351 DPEP1P16444 411 aa7.56□□□□□ -1.2
DNMT1-220ENST00000589351 EIF4A2Q14240 407 aaKnown RBP7.56□□□□□ -1.2
DNMT1-220ENST00000589351 DALRD3Q5D0E6 543 aaKnown RBP7.56□□□□□ -1.2
DNMT1-220ENST00000589351 ZNF530Q6P9A1 599 aaPredicted RBP7.56□□□□□ -1.2
DNMT1-220ENST00000589351 C1orf216Q8TAB5 229 aa7.56□□□□□ -1.2
DNMT1-220ENST00000589351 AIDAQ96BJ3 306 aa7.56□□□□□ -1.2
DNMT1-220ENST00000589351 PCMTD1Q96MG8 357 aaPredicted RBP7.56□□□□□ -1.2
DNMT1-220ENST00000589351 KRTAP9-9Q9BYP9 154 aa7.56□□□□□ -1.2
DNMT1-220ENST00000589351 KRTAP9-4Q9BYQ2 154 aa7.56□□□□□ -1.2
DNMT1-220ENST00000589351 TOGARAM1Q9Y4F4 1720 aa7.55□□□□□ -1.2
DNMT1-220ENST00000589351 PTCD1O75127 700 aaKnown RBP7.55□□□□□ -1.2
DNMT1-220ENST00000589351 FSTL1Q12841 308 aa7.55□□□□□ -1.2
DNMT1-220ENST00000589351 PRSS36Q5K4E3 855 aa7.55□□□□□ -1.2
DNMT1-220ENST00000589351 ZNF468Q5VIY5 522 aaPredicted RBP7.55□□□□□ -1.2
DNMT1-220ENST00000589351 C9orf131Q5VYM1 1079 aa7.55□□□□□ -1.2
DNMT1-220ENST00000589351 NFATC2IPQ8NCF5 419 aa7.55□□□□□ -1.2
DNMT1-220ENST00000589351 CEP350Q5VT06 3117 aa7.55□□□□□ -1.2
DNMT1-220ENST00000589351 PXDNLA1KZ92 1463 aa7.55□□□□□ -1.2
DNMT1-220ENST00000589351 PRRT3Q5FWE3 981 aa7.54□□□□□ -1.2
DNMT1-220ENST00000589351 ARSJQ5FYB0 599 aaPredicted RBP7.54□□□□□ -1.2
DNMT1-220ENST00000589351 NBPF11Q86T75 865 aa7.54□□□□□ -1.2
DNMT1-220ENST00000589351 MORC1Q86VD1 984 aa7.54□□□□□ -1.2
DNMT1-220ENST00000589351 NMRK2Q9NPI5 230 aa7.54□□□□□ -1.2
DNMT1-220ENST00000589351 PRR12Q9ULL5 1215 aa7.54□□□□□ -1.2
DNMT1-220ENST00000589351 CICQ96RK0 1608 aaPredicted RBP7.53□□□□□ -1.2
DNMT1-220ENST00000589351 FAM229AH3BQW9 127 aa7.53□□□□□ -1.2
DNMT1-220ENST00000589351 CRKLP46109 303 aaKnown RBP7.53□□□□□ -1.2
DNMT1-220ENST00000589351 EIF4G2P78344 907 aaKnown RBP eCLIP7.53□□□□□ -1.2
DNMT1-220ENST00000589351 USP4Q13107 963 aa7.53□□□□□ -1.2
DNMT1-220ENST00000589351 DNAJC5GQ8N7S2 189 aa7.53□□□□□ -1.2
DNMT1-220ENST00000589351 SLC4A9Q96Q91 983 aa7.53□□□□□ -1.2
DNMT1-220ENST00000589351 NIFKQ9BYG3 293 aaKnown RBP7.53□□□□□ -1.2
DNMT1-220ENST00000589351 GOPCQ9HD26 462 aa7.53□□□□□ -1.2
DNMT1-220ENST00000589351 RNF181Q9P0P0 153 aa7.53□□□□□ -1.2
DNMT1-220ENST00000589351 ZNF831Q5JPB2 1677 aa7.53□□□□□ -1.2
DNMT1-220ENST00000589351 N4BP2Q86UW6 1770 aaPredicted RBP7.53□□□□□ -1.2
DNMT1-220ENST00000589351 C10orf71Q711Q0 1435 aa7.52□□□□□ -1.2
DNMT1-220ENST00000589351 KIF13BQ9NQT8 1826 aa7.52□□□□□ -1.2
DNMT1-220ENST00000589351 KDRP35968 1356 aa7.52□□□□□ -1.21
DNMT1-220ENST00000589351 ELOA3CA0A087WX78 387 aaPredicted RBP7.52□□□□□ -1.21
DNMT1-220ENST00000589351 SPDYE3A6NKU9 549 aa7.52□□□□□ -1.21
DNMT1-220ENST00000589351 ELOA3DA6NLF2 546 aaPredicted RBP7.52□□□□□ -1.21
DNMT1-220ENST00000589351 KCNA3P22001 575 aa7.52□□□□□ -1.21
DNMT1-220ENST00000589351 SCNN1DP51172 638 aa7.52□□□□□ -1.21
DNMT1-220ENST00000589351 ELOA3BQ3SY89 546 aa7.52□□□□□ -1.21
DNMT1-220ENST00000589351 ELOA3Q8NG57 546 aa7.52□□□□□ -1.21
DNMT1-220ENST00000589351 PANK3Q9H999 370 aa7.52□□□□□ -1.21
DNMT1-220ENST00000589351 DOLKQ9UPQ8 538 aa7.52□□□□□ -1.21
DNMT1-220ENST00000589351 KNSTRNQ9Y448 316 aa7.52□□□□□ -1.21
DNMT1-220ENST00000589351 C4AP0C0L4 1744 aa7.52□□□□□ -1.21
DNMT1-220ENST00000589351 ANKRD26Q9UPS8 1709 aa7.52□□□□□ -1.21
DNMT1-220ENST00000589351 USP42Q9H9J4 1324 aaKnown RBP7.52□□□□□ -1.21
DNMT1-220ENST00000589351 CLSPNQ9HAW4 1339 aa7.52□□□□□ -1.21
DNMT1-220ENST00000589351 FAM157BP0CG42 384 aa7.51□□□□□ -1.21
DNMT1-220ENST00000589351 LMNB1P20700 586 aa7.51□□□□□ -1.21
DNMT1-220ENST00000589351 TM4SF1P30408 202 aa7.51□□□□□ -1.21
DNMT1-220ENST00000589351 COL9A3Q14050 684 aaPredicted RBP7.51□□□□□ -1.21
DNMT1-220ENST00000589351 AKAP4Q5JQC9 854 aa7.51□□□□□ -1.21
DNMT1-220ENST00000589351 SULT6B1Q6IMI4 303 aa7.51□□□□□ -1.21
DNMT1-220ENST00000589351 KRTAP19-1Q8IUB9 90 aa7.51□□□□□ -1.21
DNMT1-220ENST00000589351 PHTF2Q8N3S3 785 aa7.51□□□□□ -1.21
DNMT1-220ENST00000589351 SMC1BQ8NDV3 1235 aa7.51□□□□□ -1.21
DNMT1-220ENST00000589351 ZIC5Q96T25 663 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 132.2 ms