RNA–Protein interactions for RNA: ENST00000588419.1

HDAC5-208, Transcript of histone deacetylase 5, humanhuman

TSL 2

Gene HDAC5, Length 742 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5-208ENST00000588419 ZNF341Q9BYN7 854 aa17.07■□□□□ 0.32
HDAC5-208ENST00000588419 API5Q9BZZ5 524 aaKnown RBP17.07■□□□□ 0.32
HDAC5-208ENST00000588419 GNL3LQ9NVN8 582 aaKnown RBP17.07■□□□□ 0.32
HDAC5-208ENST00000588419 DAGLAQ9Y4D2 1042 aa17.07■□□□□ 0.32
HDAC5-208ENST00000588419 MGAMO43451 1857 aa17.06■□□□□ 0.32
HDAC5-208ENST00000588419 MYCP01106 439 aaPredicted RBP17.06■□□□□ 0.32
HDAC5-208ENST00000588419 LDHBP07195 334 aaKnown RBP17.06■□□□□ 0.32
HDAC5-208ENST00000588419 INPP5BP32019 993 aa17.06■□□□□ 0.32
HDAC5-208ENST00000588419 ERO1BQ86YB8 467 aa17.06■□□□□ 0.32
HDAC5-208ENST00000588419 KIAA0100Q14667 2235 aaKnown RBP17.06■□□□□ 0.32
HDAC5-208ENST00000588419 DOCK1Q14185 1865 aa17.05■□□□□ 0.32
HDAC5-208ENST00000588419 IRF6O14896 467 aa17.05■□□□□ 0.32
HDAC5-208ENST00000588419 CETPP11597 493 aa17.05■□□□□ 0.32
HDAC5-208ENST00000588419 ADORA1P30542 326 aa17.05■□□□□ 0.32
HDAC5-208ENST00000588419 PHKA1P46020 1223 aa17.05■□□□□ 0.32
HDAC5-208ENST00000588419 SNAPC2Q13487 334 aa17.05■□□□□ 0.32
HDAC5-208ENST00000588419 CDC42EP5Q6NZY7 148 aa17.05■□□□□ 0.32
HDAC5-208ENST00000588419 MEIS3Q99687 375 aa17.05■□□□□ 0.32
HDAC5-208ENST00000588419 PTPRFP10586 1907 aa17.04■□□□□ 0.32
HDAC5-208ENST00000588419 BTBD19C9JJ37 291 aa17.04■□□□□ 0.32
HDAC5-208ENST00000588419 CIAO1O76071 339 aa17.04■□□□□ 0.32
HDAC5-208ENST00000588419 IL15P40933 162 aaPredicted RBP17.04■□□□□ 0.32
HDAC5-208ENST00000588419 NFIAQ12857 509 aa17.04■□□□□ 0.32
HDAC5-208ENST00000588419 PPIL2Q13356 520 aa17.04■□□□□ 0.32
HDAC5-208ENST00000588419 FKBP1CQ5VVH2 108 aa17.04■□□□□ 0.32
HDAC5-208ENST00000588419 INTS3Q68E01 1043 aaKnown RBP17.04■□□□□ 0.32
HDAC5-208ENST00000588419 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.04■□□□□ 0.32
HDAC5-208ENST00000588419 FAM151AQ8WW52 585 aa17.04■□□□□ 0.32
HDAC5-208ENST00000588419 MRIQ9BWK5 157 aa17.04■□□□□ 0.32
HDAC5-208ENST00000588419 USP40Q9NVE5 1235 aa17.04■□□□□ 0.32
HDAC5-208ENST00000588419 PTCH2Q9Y6C5 1203 aa17.04■□□□□ 0.32
HDAC5-208ENST00000588419 ATAD5Q96QE3 1844 aa17.04■□□□□ 0.32
HDAC5-208ENST00000588419 HTTP42858 3142 aa17.03■□□□□ 0.32
HDAC5-208ENST00000588419 KIF22Q14807 665 aa17.03■□□□□ 0.32
HDAC5-208ENST00000588419 ARHGEF6Q15052 776 aa17.03■□□□□ 0.32
HDAC5-208ENST00000588419 SLC9C1Q4G0N8 1177 aa17.03■□□□□ 0.32
HDAC5-208ENST00000588419 ARHGAP39Q9C0H5 1083 aa17.03■□□□□ 0.32
HDAC5-208ENST00000588419 DENND2AQ9ULE3 1009 aa17.03■□□□□ 0.32
HDAC5-208ENST00000588419 CENPFP49454 3210 aa17.03■□□□□ 0.32
HDAC5-208ENST00000588419 CT47B1P0C2W7 299 aaPredicted RBP17.02■□□□□ 0.32
HDAC5-208ENST00000588419 DZIP1Q86YF9 867 aaKnown RBP17.02■□□□□ 0.32
HDAC5-208ENST00000588419 ABCF2Q9UG63 623 aa17.02■□□□□ 0.32
HDAC5-208ENST00000588419 FBXO3Q9UK99 471 aa17.02■□□□□ 0.32
HDAC5-208ENST00000588419 HDAC5Q9UQL6 1122 aa17.02■□□□□ 0.32
HDAC5-208ENST00000588419 PHIPQ8WWQ0 1821 aa17.01■□□□□ 0.31
HDAC5-208ENST00000588419 EN2P19622 333 aaPredicted RBP17.01■□□□□ 0.31
HDAC5-208ENST00000588419 CCDC102BQ68D86 513 aa17.01■□□□□ 0.31
HDAC5-208ENST00000588419 ZSCAN29Q8IWY8 852 aaPredicted RBP17.01■□□□□ 0.31
HDAC5-208ENST00000588419 TRMT2AQ8IZ69 625 aaKnown RBP17.01■□□□□ 0.31
HDAC5-208ENST00000588419 ARMC5Q96C12 935 aa17.01■□□□□ 0.31
HDAC5-208ENST00000588419 TMEM106CQ9BVX2 250 aa17.01■□□□□ 0.31
HDAC5-208ENST00000588419 CPA4Q9UI42 421 aa17.01■□□□□ 0.31
HDAC5-208ENST00000588419 SRGAP3O43295 1099 aa17■□□□□ 0.31
HDAC5-208ENST00000588419 TLR2O60603 784 aa17■□□□□ 0.31
HDAC5-208ENST00000588419 PPATQ06203 517 aa17■□□□□ 0.31
HDAC5-208ENST00000588419 PICALMQ13492 652 aa17■□□□□ 0.31
HDAC5-208ENST00000588419 SLC4A8Q2Y0W8 1093 aa17■□□□□ 0.31
HDAC5-208ENST00000588419 FAM198AQ9UFP1 575 aa17■□□□□ 0.31
HDAC5-208ENST00000588419 SALL1Q9NSC2 1324 aa16.99■□□□□ 0.31
HDAC5-208ENST00000588419 SEMA3EO15041 775 aa16.99■□□□□ 0.31
HDAC5-208ENST00000588419 RGS3P49796 1198 aa16.99■□□□□ 0.31
HDAC5-208ENST00000588419 RARSP54136 660 aaKnown RBP16.99■□□□□ 0.31
HDAC5-208ENST00000588419 TIMM10P62072 90 aa16.99■□□□□ 0.31
HDAC5-208ENST00000588419 LACTBP83111 547 aaPredicted RBP16.99■□□□□ 0.31
HDAC5-208ENST00000588419 RASGRF1Q13972 1273 aa16.99■□□□□ 0.31
HDAC5-208ENST00000588419 NBPF11Q86T75 865 aa16.99■□□□□ 0.31
HDAC5-208ENST00000588419 ZFPM1Q8IX07 1006 aa16.99■□□□□ 0.31
HDAC5-208ENST00000588419 ZGPATQ8N5A5 531 aaKnown RBP16.99■□□□□ 0.31
HDAC5-208ENST00000588419 SH3TC2Q8TF17 1288 aa16.99■□□□□ 0.31
HDAC5-208ENST00000588419 FRAT1Q92837 279 aaPredicted RBP16.99■□□□□ 0.31
HDAC5-208ENST00000588419 COPRSQ9NQ92 184 aa16.99■□□□□ 0.31
HDAC5-208ENST00000588419 MAST2Q6P0Q8 1798 aa16.99■□□□□ 0.31
HDAC5-208ENST00000588419 MYO5AQ9Y4I1 1855 aaKnown RBP16.99■□□□□ 0.31
HDAC5-208ENST00000588419 A0A1B0GUL7 405 aa16.98■□□□□ 0.31
HDAC5-208ENST00000588419 PDHXO00330 501 aa16.98■□□□□ 0.31
HDAC5-208ENST00000588419 TFCP2Q12800 502 aa16.98■□□□□ 0.31
HDAC5-208ENST00000588419 ZNF333Q96JL9 665 aa16.98■□□□□ 0.31
HDAC5-208ENST00000588419 NEUROD6Q96NK8 337 aa16.98■□□□□ 0.31
HDAC5-208ENST00000588419 ZCCHC17Q9NP64 241 aaKnown RBP16.98■□□□□ 0.31
HDAC5-208ENST00000588419 CDK5RAP2Q96SN8 1893 aa16.97■□□□□ 0.31
HDAC5-208ENST00000588419 GNAI3P08754 354 aa16.97■□□□□ 0.31
HDAC5-208ENST00000588419 BTDP43251 543 aa16.97■□□□□ 0.31
HDAC5-208ENST00000588419 XAGE2Q96GT9 111 aa16.97■□□□□ 0.31
HDAC5-208ENST00000588419 TNNQ9UQP3 1299 aa16.97■□□□□ 0.31
HDAC5-208ENST00000588419 MVPQ14764 893 aaKnown RBP16.96■□□□□ 0.31
HDAC5-208ENST00000588419 GORABQ5T7V8 394 aa16.96■□□□□ 0.31
HDAC5-208ENST00000588419 ANKRD23Q86SG2 305 aa16.96■□□□□ 0.31
HDAC5-208ENST00000588419 CLUAP1Q96AJ1 413 aa16.96■□□□□ 0.31
HDAC5-208ENST00000588419 PICK1Q9NRD5 415 aa16.96■□□□□ 0.31
HDAC5-208ENST00000588419 ZNF112Q9UJU3 913 aa16.96■□□□□ 0.31
HDAC5-208ENST00000588419 AKAP2Q9Y2D5 859 aa16.96■□□□□ 0.31
HDAC5-208ENST00000588419 BRCA2P51587 3418 aa16.96■□□□□ 0.31
HDAC5-208ENST00000588419 FMNL1O95466 1100 aaPredicted RBP16.95■□□□□ 0.3
HDAC5-208ENST00000588419 SLURP2P0DP57 97 aa16.95■□□□□ 0.3
HDAC5-208ENST00000588419 NOL9Q5SY16 702 aaKnown RBP16.95■□□□□ 0.3
HDAC5-208ENST00000588419 SPTY2D1Q68D10 685 aaPredicted RBP16.95■□□□□ 0.3
HDAC5-208ENST00000588419 GADL1Q6ZQY3 521 aa16.95■□□□□ 0.3
HDAC5-208ENST00000588419 ERICH6Q7L0X2 663 aa16.95■□□□□ 0.3
HDAC5-208ENST00000588419 SLF2Q8IX21 1173 aa16.95■□□□□ 0.3
HDAC5-208ENST00000588419 KCNH4Q9UQ05 1017 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms