RNA–Protein interactions for RNA: ENST00000584377.5

CSNK1D-222, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 2,891 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-222ENST00000584377 RIOK3O14730 519 aaKnown RBP15.35■□□□□ 0.05
CSNK1D-222ENST00000584377 MAP3K12Q12852 859 aa15.35■□□□□ 0.05
CSNK1D-222ENST00000584377 INTS5Q6P9B9 1019 aaKnown RBP15.35■□□□□ 0.05
CSNK1D-222ENST00000584377 SYNE3Q6ZMZ3 975 aa15.35■□□□□ 0.05
CSNK1D-222ENST00000584377 UTP14AQ9BVJ6 771 aaKnown RBP15.35■□□□□ 0.05
CSNK1D-222ENST00000584377 PLCH1Q4KWH8 1693 aa15.35■□□□□ 0.05
CSNK1D-222ENST00000584377 DDX60Q8IY21 1712 aaKnown RBP15.35■□□□□ 0.05
CSNK1D-222ENST00000584377 KIF28PB7ZC32 967 aa15.35■□□□□ 0.05
CSNK1D-222ENST00000584377 SPTLC2O15270 562 aa15.35■□□□□ 0.05
CSNK1D-222ENST00000584377 CDKL5O76039 1030 aa15.35■□□□□ 0.05
CSNK1D-222ENST00000584377 KIF23Q02241 960 aaPredicted RBP15.35■□□□□ 0.05
CSNK1D-222ENST00000584377 APOA5Q6Q788 366 aa15.35■□□□□ 0.05
CSNK1D-222ENST00000584377 MAGEB6Q8N7X4 407 aa15.35■□□□□ 0.05
CSNK1D-222ENST00000584377 SDF4Q9BRK5 362 aa15.35■□□□□ 0.05
CSNK1D-222ENST00000584377 SEC31BQ9NQW1 1179 aa15.35■□□□□ 0.05
CSNK1D-222ENST00000584377 ANO10Q9NW15 660 aa15.35■□□□□ 0.05
CSNK1D-222ENST00000584377 NEDD4P46934 1319 aa15.35■□□□□ 0.05
CSNK1D-222ENST00000584377 RXRAP19793 462 aa15.34■□□□□ 0.05
CSNK1D-222ENST00000584377 ATP6V1AP38606 617 aa15.34■□□□□ 0.05
CSNK1D-222ENST00000584377 CRKLP46109 303 aaKnown RBP15.34■□□□□ 0.05
CSNK1D-222ENST00000584377 TMEM87BQ96K49 555 aa15.34■□□□□ 0.05
CSNK1D-222ENST00000584377 OGFRQ9NZT2 677 aa15.34■□□□□ 0.05
CSNK1D-222ENST00000584377 NRBP1Q9UHY1 535 aa15.34■□□□□ 0.05
CSNK1D-222ENST00000584377 MYO5AQ9Y4I1 1855 aaKnown RBP15.34■□□□□ 0.05
CSNK1D-222ENST00000584377 BECN2A8MW95 431 aa15.34■□□□□ 0.05
CSNK1D-222ENST00000584377 MBD4O95243 580 aa15.34■□□□□ 0.05
CSNK1D-222ENST00000584377 NDUFA8P51970 172 aa15.34■□□□□ 0.05
CSNK1D-222ENST00000584377 ALX1Q15699 326 aa15.34■□□□□ 0.05
CSNK1D-222ENST00000584377 CPLX2Q6PUV4 134 aaKnown RBP15.34■□□□□ 0.05
CSNK1D-222ENST00000584377 MICU3Q86XE3 530 aa15.34■□□□□ 0.05
CSNK1D-222ENST00000584377 PLCD3Q8N3E9 789 aa15.34■□□□□ 0.05
CSNK1D-222ENST00000584377 NAPBQ9H115 298 aa15.34■□□□□ 0.05
CSNK1D-222ENST00000584377 CLIP2Q9UDT6 1046 aa15.34■□□□□ 0.05
CSNK1D-222ENST00000584377 A0A087WWV3 80 aa15.34■□□□□ 0.05
CSNK1D-222ENST00000584377 PATL2C9JE40 543 aaKnown RBP15.34■□□□□ 0.05
CSNK1D-222ENST00000584377 ERCC4Q92889 916 aaPredicted RBP15.34■□□□□ 0.05
CSNK1D-222ENST00000584377 ALG1Q9BT22 464 aa15.34■□□□□ 0.05
CSNK1D-222ENST00000584377 SENP2Q9HC62 589 aa15.34■□□□□ 0.05
CSNK1D-222ENST00000584377 DDB1Q16531 1140 aa15.33■□□□□ 0.04
CSNK1D-222ENST00000584377 ANO1Q5XXA6 986 aa15.33■□□□□ 0.04
CSNK1D-222ENST00000584377 SARM1Q6SZW1 724 aa15.33■□□□□ 0.04
CSNK1D-222ENST00000584377 NFXL1Q6ZNB6 911 aa15.33■□□□□ 0.04
CSNK1D-222ENST00000584377 IFNL3Q8IZI9 196 aa15.33■□□□□ 0.04
CSNK1D-222ENST00000584377 ACSBG1Q96GR2 724 aa15.33■□□□□ 0.04
CSNK1D-222ENST00000584377 AIFM3Q96NN9 605 aa15.33■□□□□ 0.04
CSNK1D-222ENST00000584377 CDCA7Q9BWT1 371 aaPredicted RBP15.33■□□□□ 0.04
CSNK1D-222ENST00000584377 EPB41L4AQ9HCS5 686 aaPredicted RBP15.33■□□□□ 0.04
CSNK1D-222ENST00000584377 DOT1LQ8TEK3 1739 aa15.33■□□□□ 0.04
CSNK1D-222ENST00000584377 ZBTB43O43298 467 aa15.33■□□□□ 0.04
CSNK1D-222ENST00000584377 CTIFO43310 598 aaKnown RBP15.33■□□□□ 0.04
CSNK1D-222ENST00000584377 CHAF1AQ13111 956 aaPredicted RBP15.33■□□□□ 0.04
CSNK1D-222ENST00000584377 CCDC152Q4G0S7 254 aa15.33■□□□□ 0.04
CSNK1D-222ENST00000584377 PARP10Q53GL7 1025 aa15.33■□□□□ 0.04
CSNK1D-222ENST00000584377 CEP57L1Q8IYX8 460 aa15.33■□□□□ 0.04
CSNK1D-222ENST00000584377 RGS22Q8NE09 1264 aa15.33■□□□□ 0.04
CSNK1D-222ENST00000584377 IGDCC4Q8TDY8 1250 aa15.33■□□□□ 0.04
CSNK1D-222ENST00000584377 COL16A1Q07092 1604 aaPredicted RBP15.32■□□□□ 0.04
CSNK1D-222ENST00000584377 CDC27P30260 824 aa15.32■□□□□ 0.04
CSNK1D-222ENST00000584377 IRX5P78411 483 aaPredicted RBP15.32■□□□□ 0.04
CSNK1D-222ENST00000584377 LRMPQ12912 555 aa15.32■□□□□ 0.04
CSNK1D-222ENST00000584377 TMEM67Q5HYA8 995 aa15.32■□□□□ 0.04
CSNK1D-222ENST00000584377 CCDC144CPQ8IYA2 1237 aa15.32■□□□□ 0.04
CSNK1D-222ENST00000584377 PHKBQ93100 1093 aa15.32■□□□□ 0.04
CSNK1D-222ENST00000584377 ARMT1Q9H993 441 aa15.32■□□□□ 0.04
CSNK1D-222ENST00000584377 INCENPQ9NQS7 918 aa15.32■□□□□ 0.04
CSNK1D-222ENST00000584377 LOC102724428A0A0B4J2F2 783 aa15.32■□□□□ 0.04
CSNK1D-222ENST00000584377 CAMTA2O94983 1202 aa15.32■□□□□ 0.04
CSNK1D-222ENST00000584377 CDC25BP30305 580 aa15.32■□□□□ 0.04
CSNK1D-222ENST00000584377 IGHMBP2P38935 993 aaKnown RBP15.32■□□□□ 0.04
CSNK1D-222ENST00000584377 SIK1P57059 783 aa15.32■□□□□ 0.04
CSNK1D-222ENST00000584377 GABPB1Q06547 395 aaPredicted RBP15.32■□□□□ 0.04
CSNK1D-222ENST00000584377 LY9Q9HBG7 655 aa15.32■□□□□ 0.04
CSNK1D-222ENST00000584377 TAOK2Q9UL54 1235 aa15.32■□□□□ 0.04
CSNK1D-222ENST00000584377 CTDSPL2Q05D32 466 aa15.31■□□□□ 0.04
CSNK1D-222ENST00000584377 SGMS1Q86VZ5 419 aa15.31■□□□□ 0.04
CSNK1D-222ENST00000584377 DHX40Q8IX18 779 aaKnown RBP15.31■□□□□ 0.04
CSNK1D-222ENST00000584377 FBXW7Q969H0 707 aa15.31■□□□□ 0.04
CSNK1D-222ENST00000584377 NAT10Q9H0A0 1025 aaKnown RBP15.31■□□□□ 0.04
CSNK1D-222ENST00000584377 NIP7Q9Y221 180 aaKnown RBP eCLIP15.31■□□□□ 0.04
CSNK1D-222ENST00000584377 C4AP0C0L4 1744 aa15.31■□□□□ 0.04
CSNK1D-222ENST00000584377 C4BP0C0L5 1744 aa15.31■□□□□ 0.04
CSNK1D-222ENST00000584377 GOLGA8AA7E2F4 631 aa15.31■□□□□ 0.04
CSNK1D-222ENST00000584377 BCAMP50895 628 aa15.31■□□□□ 0.04
CSNK1D-222ENST00000584377 KRT40Q6A162 431 aa15.31■□□□□ 0.04
CSNK1D-222ENST00000584377 VPS37DQ86XT2 251 aa15.31■□□□□ 0.04
CSNK1D-222ENST00000584377 ARAP2Q8WZ64 1704 aa15.31■□□□□ 0.04
CSNK1D-222ENST00000584377 GNL2Q13823 731 aaKnown RBP15.3■□□□□ 0.04
CSNK1D-222ENST00000584377 ZRSR1Q15695 479 aaKnown RBP15.3■□□□□ 0.04
CSNK1D-222ENST00000584377 MRFAP1L1Q96HT8 127 aa15.3■□□□□ 0.04
CSNK1D-222ENST00000584377 MYL10Q9BUA6 226 aa15.3■□□□□ 0.04
CSNK1D-222ENST00000584377 ZSWIM5Q9P217 1185 aa15.3■□□□□ 0.04
CSNK1D-222ENST00000584377 KIAA1468Q9P260 1216 aa15.3■□□□□ 0.04
CSNK1D-222ENST00000584377 SPATA31A1Q5TZJ5 1347 aa15.3■□□□□ 0.04
CSNK1D-222ENST00000584377 GSG1L2A8MUP6 293 aa15.3■□□□□ 0.04
CSNK1D-222ENST00000584377 IFIT3O14879 490 aaKnown RBP15.3■□□□□ 0.04
CSNK1D-222ENST00000584377 ADAMTS2O95450 1211 aa15.3■□□□□ 0.04
CSNK1D-222ENST00000584377 SLFN14P0C7P3 912 aa15.3■□□□□ 0.04
CSNK1D-222ENST00000584377 IARSP41252 1262 aaKnown RBP15.3■□□□□ 0.04
CSNK1D-222ENST00000584377 LIFRP42702 1097 aa15.3■□□□□ 0.04
CSNK1D-222ENST00000584377 ITPK1Q13572 414 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms