RNA–Protein interactions for RNA: ENST00000581849.1

CASC3-207, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 2

Gene CASC3, Length 580 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-207ENST00000581849 VGLL4Q14135 290 aa27.63■■■□□ 2.01
CASC3-207ENST00000581849 DIXDC1Q155Q3 683 aa27.63■■■□□ 2.01
CASC3-207ENST00000581849 DCAF15Q66K64 600 aa27.63■■■□□ 2.01
CASC3-207ENST00000581849 FAM151AQ8WW52 585 aa27.63■■■□□ 2.01
CASC3-207ENST00000581849 OPTNQ96CV9 577 aa27.63■■■□□ 2.01
CASC3-207ENST00000581849 ELP3Q9H9T3 547 aa27.63■■■□□ 2.01
CASC3-207ENST00000581849 RGS19P49795 217 aa27.62■■■□□ 2.01
CASC3-207ENST00000581849 G3BP1Q13283 466 aaKnown RBP eCLIP27.62■■■□□ 2.01
CASC3-207ENST00000581849 CDC42EP5Q6NZY7 148 aa27.62■■■□□ 2.01
CASC3-207ENST00000581849 FTSJ3Q8IY81 847 aaKnown RBP27.62■■■□□ 2.01
CASC3-207ENST00000581849 IGF2BP3O00425 579 aaKnown RBP eCLIP27.61■■■□□ 2.01
CASC3-207ENST00000581849 FKTNO75072 461 aa27.61■■■□□ 2.01
CASC3-207ENST00000581849 SPTY2D1Q68D10 685 aaPredicted RBP27.61■■■□□ 2.01
CASC3-207ENST00000581849 SLF2Q8IX21 1173 aa27.61■■■□□ 2.01
CASC3-207ENST00000581849 GAKO14976 1311 aa27.61■■■□□ 2.01
CASC3-207ENST00000581849 POLA2Q14181 598 aa27.6■■■□□ 2.01
CASC3-207ENST00000581849 ZBTB4Q9P1Z0 1013 aaPredicted RBP27.6■■■□□ 2.01
CASC3-207ENST00000581849 MYH2Q9UKX2 1941 aa27.6■■■□□ 2.01
CASC3-207ENST00000581849 SPDYE5A6NIY4 337 aa27.59■■■□□ 2.01
CASC3-207ENST00000581849 SSH3Q8TE77 659 aa27.59■■■□□ 2.01
CASC3-207ENST00000581849 FAM163AQ96GL9 167 aaPredicted RBP27.59■■■□□ 2.01
CASC3-207ENST00000581849 MS4A4AQ96JQ5 239 aa27.59■■■□□ 2.01
CASC3-207ENST00000581849 GTF2A2P52657 109 aa27.58■■■□□ 2.01
CASC3-207ENST00000581849 ATP8B2P98198 1209 aa27.58■■■□□ 2.01
CASC3-207ENST00000581849 DZIP1Q86YF9 867 aaKnown RBP27.58■■■□□ 2.01
CASC3-207ENST00000581849 NEUROD6Q96NK8 337 aa27.58■■■□□ 2.01
CASC3-207ENST00000581849 WRNIP1Q96S55 665 aa27.58■■■□□ 2.01
CASC3-207ENST00000581849 ZNF341Q9BYN7 854 aa27.58■■■□□ 2.01
CASC3-207ENST00000581849 R3HDMLQ9H3Y0 253 aa27.58■■■□□ 2.01
CASC3-207ENST00000581849 GPR108Q9NPR9 543 aa27.58■■■□□ 2.01
CASC3-207ENST00000581849 USP40Q9NVE5 1235 aa27.57■■■□□ 2
CASC3-207ENST00000581849 SNCAIPQ9Y6H5 919 aa27.57■■■□□ 2
CASC3-207ENST00000581849 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP27.57■■■□□ 2
CASC3-207ENST00000581849 ARID4AP29374 1257 aaPredicted RBP27.56■■■□□ 2
CASC3-207ENST00000581849 ERO1BQ86YB8 467 aa27.56■■■□□ 2
CASC3-207ENST00000581849 PTPN18Q99952 460 aa27.56■■■□□ 2
CASC3-207ENST00000581849 IDI2Q9BXS1 227 aa27.56■■■□□ 2
CASC3-207ENST00000581849 ABCF2Q9UG63 623 aa27.56■■■□□ 2
CASC3-207ENST00000581849 ZBTB7BO15156 539 aaPredicted RBP27.55■■■□□ 2
CASC3-207ENST00000581849 ENTPD3O75355 529 aa27.55■■■□□ 2
CASC3-207ENST00000581849 NFIAQ12857 509 aa27.55■■■□□ 2
CASC3-207ENST00000581849 GORABQ5T7V8 394 aa27.55■■■□□ 2
CASC3-207ENST00000581849 ITPRIPQ8IWB1 547 aa27.55■■■□□ 2
CASC3-207ENST00000581849 FAM198AQ9UFP1 575 aa27.55■■■□□ 2
CASC3-207ENST00000581849 RFX7Q2KHR2 1363 aa27.55■■■□□ 2
CASC3-207ENST00000581849 UQCRFS1P1P0C7P4 283 aa27.54■■■□□ 2
CASC3-207ENST00000581849 ERICH6Q7L0X2 663 aa27.54■■■□□ 2
CASC3-207ENST00000581849 SPATA5Q8NB90 893 aa27.54■■■□□ 2
CASC3-207ENST00000581849 OTUD5Q96G74 571 aa27.54■■■□□ 2
CASC3-207ENST00000581849 HMG20BQ9P0W2 317 aa27.54■■■□□ 2
CASC3-207ENST00000581849 ZNF112Q9UJU3 913 aa27.54■■■□□ 2
CASC3-207ENST00000581849 AK9Q5TCS8 1911 aa27.53■■■□□ 2
CASC3-207ENST00000581849 RLBP1P12271 317 aa27.53■■■□□ 2
CASC3-207ENST00000581849 TCP10Q12799 353 aa27.53■■■□□ 2
CASC3-207ENST00000581849 FBXO46Q6PJ61 603 aaPredicted RBP27.53■■■□□ 2
CASC3-207ENST00000581849 CNKSR2Q8WXI2 1034 aa27.53■■■□□ 2
CASC3-207ENST00000581849 BRI3BPQ8WY22 251 aa27.53■■■□□ 2
CASC3-207ENST00000581849 ZCCHC17Q9NP64 241 aaKnown RBP27.53■■■□□ 2
CASC3-207ENST00000581849 NOP58Q9Y2X3 529 aaKnown RBP27.53■■■□□ 2
CASC3-207ENST00000581849 MROH7-TTC4A0A0A0MT08 1334 aa27.52■■■□□ 2
CASC3-207ENST00000581849 CCL15-CCL14A0A0B4J2E2 113 aa27.52■■■□□ 2
CASC3-207ENST00000581849 MAP4K4O95819 1239 aaPredicted RBP27.52■■■□□ 2
CASC3-207ENST00000581849 CRHR2Q13324 411 aa27.52■■■□□ 2
CASC3-207ENST00000581849 PPIL2Q13356 520 aa27.52■■■□□ 2
CASC3-207ENST00000581849 CCL15Q16663 113 aa27.52■■■□□ 2
CASC3-207ENST00000581849 HPS5Q9UPZ3 1129 aa27.52■■■□□ 2
CASC3-207ENST00000581849 MS4A1P11836 297 aa27.51■■□□□ 1.99
CASC3-207ENST00000581849 PPATQ06203 517 aa27.51■■□□□ 1.99
CASC3-207ENST00000581849 ZKSCAN4Q969J2 545 aaPredicted RBP27.51■■□□□ 1.99
CASC3-207ENST00000581849 DOCK2Q92608 1830 aa27.51■■□□□ 1.99
CASC3-207ENST00000581849 GPR75-ASB3A0A0A6YYF3 556 aa27.5■■□□□ 1.99
CASC3-207ENST00000581849 IGSF3O75054 1194 aa27.5■■□□□ 1.99
CASC3-207ENST00000581849 LDHCP07864 332 aa27.5■■□□□ 1.99
CASC3-207ENST00000581849 CETPP11597 493 aa27.5■■□□□ 1.99
CASC3-207ENST00000581849 GSTO1P78417 241 aa27.5■■□□□ 1.99
CASC3-207ENST00000581849 MLLT1Q03111 559 aaPredicted RBP27.5■■□□□ 1.99
CASC3-207ENST00000581849 MECOMQ03112 1051 aa27.5■■□□□ 1.99
CASC3-207ENST00000581849 TNNI3KQ59H18 835 aa27.5■■□□□ 1.99
CASC3-207ENST00000581849 NOL9Q5SY16 702 aaKnown RBP27.5■■□□□ 1.99
CASC3-207ENST00000581849 MIGA2Q7L4E1 593 aa27.5■■□□□ 1.99
CASC3-207ENST00000581849 ERO1AQ96HE7 468 aa27.5■■□□□ 1.99
CASC3-207ENST00000581849 FPGT-TNNI3KV9GXZ4 949 aa27.5■■□□□ 1.99
CASC3-207ENST00000581849 ATRNL1Q5VV63 1379 aa27.49■■□□□ 1.99
CASC3-207ENST00000581849 NPM3O75607 178 aaKnown RBP27.49■■□□□ 1.99
CASC3-207ENST00000581849 SURF6O75683 361 aaKnown RBP27.49■■□□□ 1.99
CASC3-207ENST00000581849 BTDP43251 543 aa27.49■■□□□ 1.99
CASC3-207ENST00000581849 RGS3P49796 1198 aa27.49■■□□□ 1.99
CASC3-207ENST00000581849 OS9Q13438 667 aaPredicted RBP27.49■■□□□ 1.99
CASC3-207ENST00000581849 SNAPC2Q13487 334 aa27.49■■□□□ 1.99
CASC3-207ENST00000581849 C1orf115Q9H7X2 142 aa27.49■■□□□ 1.99
CASC3-207ENST00000581849 IRF6O14896 467 aa27.48■■□□□ 1.99
CASC3-207ENST00000581849 MCAMP43121 646 aa27.48■■□□□ 1.99
CASC3-207ENST00000581849 ZNF512BQ96KM6 892 aaPredicted RBP27.48■■□□□ 1.99
CASC3-207ENST00000581849 WDHD1O75717 1129 aaPredicted RBP27.47■■□□□ 1.99
CASC3-207ENST00000581849 INPP5BP32019 993 aa27.47■■□□□ 1.99
CASC3-207ENST00000581849 CCDC158Q5M9N0 1113 aa27.47■■□□□ 1.99
CASC3-207ENST00000581849 NSUN4Q96CB9 384 aaKnown RBP27.47■■□□□ 1.99
CASC3-207ENST00000581849 ZFYVE28Q9HCC9 887 aa27.47■■□□□ 1.99
CASC3-207ENST00000581849 SP3Q02447 781 aa27.46■■□□□ 1.99
CASC3-207ENST00000581849 MAP3K10Q02779 954 aa27.46■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms