RNA–Protein interactions for RNA: ENST00000581708.5

CDK5RAP3-222, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 543 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-222ENST00000581708 PDE3AQ14432 1141 aa15.49■□□□□ 0.07
CDK5RAP3-222ENST00000581708 DCAF15Q66K64 600 aa15.49■□□□□ 0.07
CDK5RAP3-222ENST00000581708 CEP85Q6P2H3 762 aa15.49■□□□□ 0.07
CDK5RAP3-222ENST00000581708 DZIP1Q86YF9 867 aaKnown RBP15.49■□□□□ 0.07
CDK5RAP3-222ENST00000581708 ERC1Q8IUD2 1116 aa15.49■□□□□ 0.07
CDK5RAP3-222ENST00000581708 RPAP2Q8IXW5 612 aaPredicted RBP15.49■□□□□ 0.07
CDK5RAP3-222ENST00000581708 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.49■□□□□ 0.07
CDK5RAP3-222ENST00000581708 SPATA5Q8NB90 893 aa15.49■□□□□ 0.07
CDK5RAP3-222ENST00000581708 PANK1Q8TE04 598 aa15.49■□□□□ 0.07
CDK5RAP3-222ENST00000581708 ZNF512BQ96KM6 892 aaPredicted RBP15.49■□□□□ 0.07
CDK5RAP3-222ENST00000581708 TRPA1O75762 1119 aa15.48■□□□□ 0.07
CDK5RAP3-222ENST00000581708 GSTO1P78417 241 aa15.48■□□□□ 0.07
CDK5RAP3-222ENST00000581708 TNNI3KQ59H18 835 aa15.48■□□□□ 0.07
CDK5RAP3-222ENST00000581708 CCDC158Q5M9N0 1113 aa15.48■□□□□ 0.07
CDK5RAP3-222ENST00000581708 CDC42EP5Q6NZY7 148 aa15.48■□□□□ 0.07
CDK5RAP3-222ENST00000581708 ERICH6Q7L0X2 663 aa15.48■□□□□ 0.07
CDK5RAP3-222ENST00000581708 WNK4Q96J92 1243 aa15.48■□□□□ 0.07
CDK5RAP3-222ENST00000581708 HMG20BQ9P0W2 317 aa15.48■□□□□ 0.07
CDK5RAP3-222ENST00000581708 FPGT-TNNI3KV9GXZ4 949 aa15.48■□□□□ 0.07
CDK5RAP3-222ENST00000581708 LDHCP07864 332 aa15.47■□□□□ 0.07
CDK5RAP3-222ENST00000581708 MAP3K9P80192 1104 aa15.47■□□□□ 0.07
CDK5RAP3-222ENST00000581708 DIXDC1Q155Q3 683 aa15.47■□□□□ 0.07
CDK5RAP3-222ENST00000581708 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.47■□□□□ 0.07
CDK5RAP3-222ENST00000581708 IDI2Q9BXS1 227 aa15.47■□□□□ 0.07
CDK5RAP3-222ENST00000581708 C1orf115Q9H7X2 142 aa15.47■□□□□ 0.07
CDK5RAP3-222ENST00000581708 USP40Q9NVE5 1235 aa15.47■□□□□ 0.07
CDK5RAP3-222ENST00000581708 ABCF2Q9UG63 623 aa15.47■□□□□ 0.07
CDK5RAP3-222ENST00000581708 TSKSQ9UJT2 592 aa15.47■□□□□ 0.07
CDK5RAP3-222ENST00000581708 CSADQ9Y600 493 aa15.47■□□□□ 0.07
CDK5RAP3-222ENST00000581708 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.47■□□□□ 0.07
CDK5RAP3-222ENST00000581708 HMMRO75330 724 aa15.46■□□□□ 0.07
CDK5RAP3-222ENST00000581708 ENTPD3O75355 529 aa15.46■□□□□ 0.07
CDK5RAP3-222ENST00000581708 NPM3O75607 178 aaKnown RBP15.46■□□□□ 0.07
CDK5RAP3-222ENST00000581708 CACNB3P54284 484 aa15.46■□□□□ 0.07
CDK5RAP3-222ENST00000581708 OTUD7BQ6GQQ9 843 aa15.46■□□□□ 0.07
CDK5RAP3-222ENST00000581708 TMED8Q6PL24 325 aaPredicted RBP15.46■□□□□ 0.07
CDK5RAP3-222ENST00000581708 CLMNQ96JQ2 1002 aa15.46■□□□□ 0.07
CDK5RAP3-222ENST00000581708 ZBTB40Q9NUA8 1239 aa15.46■□□□□ 0.07
CDK5RAP3-222ENST00000581708 MYH2Q9UKX2 1941 aa15.46■□□□□ 0.07
CDK5RAP3-222ENST00000581708 TESPA1A2RU30 521 aaPredicted RBP15.45■□□□□ 0.06
CDK5RAP3-222ENST00000581708 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.45■□□□□ 0.06
CDK5RAP3-222ENST00000581708 FZD1Q9UP38 647 aa15.45■□□□□ 0.06
CDK5RAP3-222ENST00000581708 MROH7-TTC4A0A0A0MT08 1334 aa15.44■□□□□ 0.06
CDK5RAP3-222ENST00000581708 CASP8AP2Q9UKL3 1982 aa15.44■□□□□ 0.06
CDK5RAP3-222ENST00000581708 GPR75-ASB3A0A0A6YYF3 556 aa15.44■□□□□ 0.06
CDK5RAP3-222ENST00000581708 MCAMP43121 646 aa15.44■□□□□ 0.06
CDK5RAP3-222ENST00000581708 MECOMQ03112 1051 aa15.44■□□□□ 0.06
CDK5RAP3-222ENST00000581708 TTC39AQ5SRH9 613 aa15.44■□□□□ 0.06
CDK5RAP3-222ENST00000581708 CDAN1Q8IWY9 1227 aa15.44■□□□□ 0.06
CDK5RAP3-222ENST00000581708 ZNF341Q9BYN7 854 aa15.44■□□□□ 0.06
CDK5RAP3-222ENST00000581708 OTOFQ9HC10 1997 aa15.44■□□□□ 0.06
CDK5RAP3-222ENST00000581708 SPDYE5A6NIY4 337 aa15.43■□□□□ 0.06
CDK5RAP3-222ENST00000581708 VGLL4Q14135 290 aa15.43■□□□□ 0.06
CDK5RAP3-222ENST00000581708 ERO1BQ86YB8 467 aa15.43■□□□□ 0.06
CDK5RAP3-222ENST00000581708 IFNL1Q8IU54 200 aa15.43■□□□□ 0.06
CDK5RAP3-222ENST00000581708 NSUN4Q96CB9 384 aaKnown RBP15.43■□□□□ 0.06
CDK5RAP3-222ENST00000581708 OPTNQ96CV9 577 aa15.43■□□□□ 0.06
CDK5RAP3-222ENST00000581708 DBNDD2Q9BQY9 259 aa15.43■□□□□ 0.06
CDK5RAP3-222ENST00000581708 LRP2BPQ9P2M1 347 aa15.43■□□□□ 0.06
CDK5RAP3-222ENST00000581708 FAM198AQ9UFP1 575 aa15.43■□□□□ 0.06
CDK5RAP3-222ENST00000581708 ZNF112Q9UJU3 913 aa15.43■□□□□ 0.06
CDK5RAP3-222ENST00000581708 COG6Q9Y2V7 657 aa15.43■□□□□ 0.06
CDK5RAP3-222ENST00000581708 RFX7Q2KHR2 1363 aa15.43■□□□□ 0.06
CDK5RAP3-222ENST00000581708 BTDP43251 543 aa15.42■□□□□ 0.06
CDK5RAP3-222ENST00000581708 GTF2A2P52657 109 aa15.42■□□□□ 0.06
CDK5RAP3-222ENST00000581708 NFIAQ12857 509 aa15.42■□□□□ 0.06
CDK5RAP3-222ENST00000581708 MKRN3Q13064 507 aaKnown RBP15.42■□□□□ 0.06
CDK5RAP3-222ENST00000581708 ABHD8Q96I13 439 aa15.42■□□□□ 0.06
CDK5RAP3-222ENST00000581708 WRNIP1Q96S55 665 aa15.42■□□□□ 0.06
CDK5RAP3-222ENST00000581708 ELP3Q9H9T3 547 aa15.42■□□□□ 0.06
CDK5RAP3-222ENST00000581708 DBNLQ9UJU6 430 aaKnown RBP15.42■□□□□ 0.06
CDK5RAP3-222ENST00000581708 COL2A1P02458 1487 aaPredicted RBP15.41■□□□□ 0.06
CDK5RAP3-222ENST00000581708 RAB11FIP3O75154 756 aa15.41■□□□□ 0.06
CDK5RAP3-222ENST00000581708 PLCG2P16885 1265 aa15.41■□□□□ 0.06
CDK5RAP3-222ENST00000581708 RGS3P49796 1198 aa15.41■□□□□ 0.06
CDK5RAP3-222ENST00000581708 MAP3K10Q02779 954 aa15.41■□□□□ 0.06
CDK5RAP3-222ENST00000581708 PKN2Q16513 984 aaKnown RBP15.41■□□□□ 0.06
CDK5RAP3-222ENST00000581708 PI16Q6UXB8 463 aa15.41■□□□□ 0.06
CDK5RAP3-222ENST00000581708 CERS3Q8IU89 383 aa15.41■□□□□ 0.06
CDK5RAP3-222ENST00000581708 EAF2Q96CJ1 260 aaPredicted RBP15.41■□□□□ 0.06
CDK5RAP3-222ENST00000581708 KIF1BPQ96EK5 621 aa15.41■□□□□ 0.06
CDK5RAP3-222ENST00000581708 NOL10Q9BSC4 688 aaKnown RBP15.41■□□□□ 0.06
CDK5RAP3-222ENST00000581708 ZCCHC17Q9NP64 241 aaKnown RBP15.41■□□□□ 0.06
CDK5RAP3-222ENST00000581708 RAI14Q9P0K7 980 aa15.41■□□□□ 0.06
CDK5RAP3-222ENST00000581708 GPR25O00155 361 aa15.4■□□□□ 0.06
CDK5RAP3-222ENST00000581708 WDHD1O75717 1129 aaPredicted RBP15.4■□□□□ 0.06
CDK5RAP3-222ENST00000581708 TBC1D8O95759 1140 aa15.4■□□□□ 0.06
CDK5RAP3-222ENST00000581708 BAG3O95817 575 aa15.4■□□□□ 0.06
CDK5RAP3-222ENST00000581708 GJA5P36382 358 aa15.4■□□□□ 0.06
CDK5RAP3-222ENST00000581708 PPATQ06203 517 aa15.4■□□□□ 0.06
CDK5RAP3-222ENST00000581708 TCP10Q12799 353 aa15.4■□□□□ 0.06
CDK5RAP3-222ENST00000581708 NOL9Q5SY16 702 aaKnown RBP15.4■□□□□ 0.06
CDK5RAP3-222ENST00000581708 CTU1Q7Z7A3 348 aaKnown RBP15.4■□□□□ 0.06
CDK5RAP3-222ENST00000581708 RHPN1Q8TCX5 695 aa15.4■□□□□ 0.06
CDK5RAP3-222ENST00000581708 ZNF384Q8TF68 577 aa15.4■□□□□ 0.06
CDK5RAP3-222ENST00000581708 MS4A4AQ96JQ5 239 aa15.4■□□□□ 0.06
CDK5RAP3-222ENST00000581708 MCOLN1Q9GZU1 580 aa15.4■□□□□ 0.06
CDK5RAP3-222ENST00000581708 EXOC6BQ9Y2D4 811 aa15.4■□□□□ 0.06
CDK5RAP3-222ENST00000581708 SNCAIPQ9Y6H5 919 aa15.4■□□□□ 0.06
CDK5RAP3-222ENST00000581708 ATRNL1Q5VV63 1379 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms