RNA–Protein interactions for RNA: ENST00000580888.5

EIF4A1-216, Transcript of eukaryotic translation initiation factor 4A1, humanhuman

TSL 2

Gene EIF4A1, Length 710 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EIF4A1-216ENST00000580888 FAM155AB1AL88 458 aaPredicted RBP21.4■■□□□ 1.02
EIF4A1-216ENST00000580888 METTL24Q5JXM2 366 aa21.4■■□□□ 1.02
EIF4A1-216ENST00000580888 OGFOD1Q8N543 542 aa21.4■■□□□ 1.02
EIF4A1-216ENST00000580888 CNNM1Q9NRU3 951 aa21.4■■□□□ 1.02
EIF4A1-216ENST00000580888 TAF5LO75529 589 aa21.39■■□□□ 1.01
EIF4A1-216ENST00000580888 FKBP1BP68106 108 aa21.39■■□□□ 1.01
EIF4A1-216ENST00000580888 ATP2B3Q16720 1220 aa21.39■■□□□ 1.01
EIF4A1-216ENST00000580888 KIAA1211Q6ZU35 1233 aa21.39■■□□□ 1.01
EIF4A1-216ENST00000580888 CCDC102AQ96A19 550 aa21.39■■□□□ 1.01
EIF4A1-216ENST00000580888 EDC3Q96F86 508 aaKnown RBP21.39■■□□□ 1.01
EIF4A1-216ENST00000580888 FAM227BQ96M60 508 aa21.39■■□□□ 1.01
EIF4A1-216ENST00000580888 CCDC171Q6TFL3 1326 aa21.38■■□□□ 1.01
EIF4A1-216ENST00000580888 CASP8AP2Q9UKL3 1982 aa21.38■■□□□ 1.01
EIF4A1-216ENST00000580888 A0A0D9SFI3 127 aa21.38■■□□□ 1.01
EIF4A1-216ENST00000580888 WNT10BO00744 389 aa21.38■■□□□ 1.01
EIF4A1-216ENST00000580888 IFIT1P09914 478 aaKnown RBP21.38■■□□□ 1.01
EIF4A1-216ENST00000580888 IL1R1P14778 569 aa21.38■■□□□ 1.01
EIF4A1-216ENST00000580888 ADORA1P30542 326 aa21.38■■□□□ 1.01
EIF4A1-216ENST00000580888 NBPF9Q3BBW0 867 aa21.38■■□□□ 1.01
EIF4A1-216ENST00000580888 CCDC158Q5M9N0 1113 aa21.38■■□□□ 1.01
EIF4A1-216ENST00000580888 MAP4K1Q92918 833 aa21.38■■□□□ 1.01
EIF4A1-216ENST00000580888 ZBED3Q96IU2 234 aaPredicted RBP21.38■■□□□ 1.01
EIF4A1-216ENST00000580888 PAG1Q9NWQ8 432 aa21.38■■□□□ 1.01
EIF4A1-216ENST00000580888 SNAP23O00161 211 aa21.37■■□□□ 1.01
EIF4A1-216ENST00000580888 FKBP1AP62942 108 aaKnown RBP21.37■■□□□ 1.01
EIF4A1-216ENST00000580888 GTF2IP78347 998 aa21.37■■□□□ 1.01
EIF4A1-216ENST00000580888 PTH1RQ03431 593 aa21.37■■□□□ 1.01
EIF4A1-216ENST00000580888 NECTIN1Q15223 517 aa21.37■■□□□ 1.01
EIF4A1-216ENST00000580888 HELBQ8NG08 1087 aaPredicted RBP21.37■■□□□ 1.01
EIF4A1-216ENST00000580888 FBXW7Q969H0 707 aa21.37■■□□□ 1.01
EIF4A1-216ENST00000580888 ZNF804AQ7Z570 1209 aa21.36■■□□□ 1.01
EIF4A1-216ENST00000580888 LPIN2Q92539 896 aa21.36■■□□□ 1.01
EIF4A1-216ENST00000580888 ZIC5Q96T25 663 aa21.36■■□□□ 1.01
EIF4A1-216ENST00000580888 HDAC9Q9UKV0 1011 aa21.36■■□□□ 1.01
EIF4A1-216ENST00000580888 ST18O60284 1047 aa21.35■■□□□ 1.01
EIF4A1-216ENST00000580888 CAPN15O75808 1086 aa21.35■■□□□ 1.01
EIF4A1-216ENST00000580888 SLC10A3P09131 477 aa21.35■■□□□ 1.01
EIF4A1-216ENST00000580888 MCM2P49736 904 aa21.35■■□□□ 1.01
EIF4A1-216ENST00000580888 PUM3Q15397 648 aaKnown RBP21.35■■□□□ 1.01
EIF4A1-216ENST00000580888 DNAJC2Q99543 621 aaKnown RBP21.35■■□□□ 1.01
EIF4A1-216ENST00000580888 SNX14Q9Y5W7 946 aa21.35■■□□□ 1.01
EIF4A1-216ENST00000580888 COL1A1P02452 1464 aaPredicted RBP21.34■■□□□ 1.01
EIF4A1-216ENST00000580888 ZNF157P51786 506 aaPredicted RBP21.34■■□□□ 1.01
EIF4A1-216ENST00000580888 TTC39AQ5SRH9 613 aa21.34■■□□□ 1.01
EIF4A1-216ENST00000580888 KIAA0825Q8IV33 1275 aa21.34■■□□□ 1.01
EIF4A1-216ENST00000580888 MTMR14Q8NCE2 650 aa21.34■■□□□ 1.01
EIF4A1-216ENST00000580888 HELLSQ9NRZ9 838 aa21.34■■□□□ 1.01
EIF4A1-216ENST00000580888 ARID4AP29374 1257 aaPredicted RBP21.33■■□□□ 1.01
EIF4A1-216ENST00000580888 UBE4AQ14139 1066 aa21.33■■□□□ 1.01
EIF4A1-216ENST00000580888 ZMYM1Q5SVZ6 1142 aa21.33■■□□□ 1.01
EIF4A1-216ENST00000580888 RASEFQ8IZ41 740 aa21.33■■□□□ 1.01
EIF4A1-216ENST00000580888 CERS5Q8N5B7 392 aa21.33■■□□□ 1.01
EIF4A1-216ENST00000580888 TM6SF1Q9BZW5 370 aa21.33■■□□□ 1.01
EIF4A1-216ENST00000580888 CIZ1Q9ULV3 898 aaPredicted RBP21.33■■□□□ 1.01
EIF4A1-216ENST00000580888 NDUFB9Q9Y6M9 179 aa21.33■■□□□ 1.01
EIF4A1-216ENST00000580888 GOLIM4O00461 696 aa21.32■■□□□ 1
EIF4A1-216ENST00000580888 TSGA10IPQ3SY00 556 aa21.32■■□□□ 1
EIF4A1-216ENST00000580888 MCMDC2Q4G0Z9 681 aa21.32■■□□□ 1
EIF4A1-216ENST00000580888 ZNF589Q86UQ0 364 aaPredicted RBP21.32■■□□□ 1
EIF4A1-216ENST00000580888 APOBEC3FQ8IUX4 373 aaKnown RBP21.32■■□□□ 1
EIF4A1-216ENST00000580888 CHMP5Q9NZZ3 219 aa21.32■■□□□ 1
EIF4A1-216ENST00000580888 FAM205AQ6ZU69 1335 aa21.31■■□□□ 1
EIF4A1-216ENST00000580888 UQCRFS1P1P0C7P4 283 aa21.31■■□□□ 1
EIF4A1-216ENST00000580888 KIF23Q02241 960 aaPredicted RBP21.31■■□□□ 1
EIF4A1-216ENST00000580888 GORABQ5T7V8 394 aa21.31■■□□□ 1
EIF4A1-216ENST00000580888 RASAL3Q86YV0 1011 aa21.31■■□□□ 1
EIF4A1-216ENST00000580888 REM2Q8IYK8 340 aaPredicted RBP21.31■■□□□ 1
EIF4A1-216ENST00000580888 SLKQ9H2G2 1235 aaPredicted RBP21.31■■□□□ 1
EIF4A1-216ENST00000580888 SAGE1Q9NXZ1 904 aa21.31■■□□□ 1
EIF4A1-216ENST00000580888 TSKSQ9UJT2 592 aa21.31■■□□□ 1
EIF4A1-216ENST00000580888 RNF113AO15541 343 aaKnown RBP21.3■■□□□ 1
EIF4A1-216ENST00000580888 NEK4P51957 841 aa21.3■■□□□ 1
EIF4A1-216ENST00000580888 RBM8AQ9Y5S9 174 aaKnown RBP21.3■■□□□ 1
EIF4A1-216ENST00000580888 LAMB1P07942 1786 aa21.3■■□□□ 1
EIF4A1-216ENST00000580888 ZBTB22O15209 634 aa21.29■■□□□ 1
EIF4A1-216ENST00000580888 ZFYP08048 801 aaPredicted RBP21.29■■□□□ 1
EIF4A1-216ENST00000580888 SLC5A1P13866 664 aa21.29■■□□□ 1
EIF4A1-216ENST00000580888 MCAMP43121 646 aa21.29■■□□□ 1
EIF4A1-216ENST00000580888 LRRFIP1Q32MZ4 808 aaKnown RBP21.29■■□□□ 1
EIF4A1-216ENST00000580888 CCDC102BQ68D86 513 aa21.29■■□□□ 1
EIF4A1-216ENST00000580888 TDRD7Q8NHU6 1098 aaKnown RBP21.29■■□□□ 1
EIF4A1-216ENST00000580888 TTC14Q96N46 770 aa21.29■■□□□ 1
EIF4A1-216ENST00000580888 SCAF8Q9UPN6 1271 aaKnown RBP21.29■■□□□ 1
EIF4A1-216ENST00000580888 ZAP70P43403 619 aa21.28■■□□□ 1
EIF4A1-216ENST00000580888 CUL4AQ13619 759 aa21.28■■□□□ 1
EIF4A1-216ENST00000580888 DLGAP5Q15398 846 aa21.28■■□□□ 1
EIF4A1-216ENST00000580888 CREB3L3Q68CJ9 461 aa21.28■■□□□ 1
EIF4A1-216ENST00000580888 FAM84BQ96KN1 310 aaPredicted RBP21.28■■□□□ 1
EIF4A1-216ENST00000580888 NF2P35240 595 aa21.27■■□□□ 1
EIF4A1-216ENST00000580888 PRAMEF18Q5VWM3 479 aa21.27■■□□□ 1
EIF4A1-216ENST00000580888 ABHD8Q96I13 439 aa21.27■■□□□ 1
EIF4A1-216ENST00000580888 CSRNP1Q96S65 589 aa21.27■■□□□ 1
EIF4A1-216ENST00000580888 ZSWIM6Q9HCJ5 1215 aa21.27■■□□□ 1
EIF4A1-216ENST00000580888 HMG20BQ9P0W2 317 aa21.27■■□□□ 1
EIF4A1-216ENST00000580888 MYH13Q9UKX3 1938 aa21.27■■□□□ 1
EIF4A1-216ENST00000580888 RPAP1Q9BWH6 1393 aaPredicted RBP21.26■□□□□ 0.99
EIF4A1-216ENST00000580888 SLC27A2O14975 620 aa21.26■□□□□ 0.99
EIF4A1-216ENST00000580888 CHGBP05060 677 aa21.26■□□□□ 0.99
EIF4A1-216ENST00000580888 HIBADHP31937 336 aaKnown RBP21.26■□□□□ 0.99
EIF4A1-216ENST00000580888 PHKA1P46020 1223 aa21.26■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms