RNA–Protein interactions for RNA: ENST00000579954.1

SSH2-209, Transcript of slingshot protein phosphatase 2, humanhuman

TSL 3 BASIC

Gene SSH2, Length 428 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH2-209ENST00000579954 PPP1R12BO60237 982 aaPredicted RBP11.1□□□□□ -0.63
SSH2-209ENST00000579954 RAB11FIP3O75154 756 aa11.1□□□□□ -0.63
SSH2-209ENST00000579954 HSPA1AP0DMV8 641 aaKnown RBP11.1□□□□□ -0.63
SSH2-209ENST00000579954 HSPA1BP0DMV9 641 aaKnown RBP11.1□□□□□ -0.63
SSH2-209ENST00000579954 TCP10Q12799 353 aa11.1□□□□□ -0.63
SSH2-209ENST00000579954 MKRN3Q13064 507 aaKnown RBP11.1□□□□□ -0.63
SSH2-209ENST00000579954 SUPT20HL1Q3ZLR7 823 aa11.1□□□□□ -0.63
SSH2-209ENST00000579954 RGMBQ6NW40 437 aa11.1□□□□□ -0.63
SSH2-209ENST00000579954 EAF2Q96CJ1 260 aaPredicted RBP11.1□□□□□ -0.63
SSH2-209ENST00000579954 DAGLAQ9Y4D2 1042 aa11.1□□□□□ -0.63
SSH2-209ENST00000579954 FKBP1BP68106 108 aa11.09□□□□□ -0.63
SSH2-209ENST00000579954 GSTO1P78417 241 aa11.09□□□□□ -0.63
SSH2-209ENST00000579954 MECOMQ03112 1051 aa11.09□□□□□ -0.63
SSH2-209ENST00000579954 NBPF12Q5TAG4 269 aaPredicted RBP11.09□□□□□ -0.63
SSH2-209ENST00000579954 HHIPL1Q96JK4 782 aa11.09□□□□□ -0.63
SSH2-209ENST00000579954 DNAJC2Q99543 621 aaKnown RBP11.09□□□□□ -0.63
SSH2-209ENST00000579954 LRRCC1Q9C099 1032 aa11.09□□□□□ -0.63
SSH2-209ENST00000579954 TMEM39BQ9GZU3 492 aa11.09□□□□□ -0.63
SSH2-209ENST00000579954 PLSCR2Q9NRY7 297 aa11.09□□□□□ -0.63
SSH2-209ENST00000579954 USP40Q9NVE5 1235 aa11.09□□□□□ -0.63
SSH2-209ENST00000579954 MYH7P12883 1935 aa11.09□□□□□ -0.63
SSH2-209ENST00000579954 CDK5RAP2Q96SN8 1893 aa11.08□□□□□ -0.64
SSH2-209ENST00000579954 SMARCA5O60264 1052 aaPredicted RBP11.08□□□□□ -0.64
SSH2-209ENST00000579954 BTDP43251 543 aa11.08□□□□□ -0.64
SSH2-209ENST00000579954 ZAP70P43403 619 aa11.08□□□□□ -0.64
SSH2-209ENST00000579954 PICALMQ13492 652 aa11.08□□□□□ -0.64
SSH2-209ENST00000579954 APOBEC3HQ6NTF7 200 aaKnown RBP11.08□□□□□ -0.64
SSH2-209ENST00000579954 CDC42EP5Q6NZY7 148 aa11.08□□□□□ -0.64
SSH2-209ENST00000579954 CCDC102AQ96A19 550 aa11.08□□□□□ -0.64
SSH2-209ENST00000579954 ZBTB47Q9UFB7 747 aaPredicted RBP11.08□□□□□ -0.64
SSH2-209ENST00000579954 NDUFB9Q9Y6M9 179 aa11.08□□□□□ -0.64
SSH2-209ENST00000579954 MROH7-TTC4A0A0A0MT08 1334 aa11.08□□□□□ -0.64
SSH2-209ENST00000579954 SSC5DA1L4H1 1573 aa11.07□□□□□ -0.64
SSH2-209ENST00000579954 IDH1O75874 414 aaKnown RBP11.07□□□□□ -0.64
SSH2-209ENST00000579954 LDHCP07864 332 aa11.07□□□□□ -0.64
SSH2-209ENST00000579954 IREB2P48200 963 aaKnown RBP11.07□□□□□ -0.64
SSH2-209ENST00000579954 MAP2K1Q02750 393 aaPredicted RBP11.07□□□□□ -0.64
SSH2-209ENST00000579954 NOGQ13253 232 aa11.07□□□□□ -0.64
SSH2-209ENST00000579954 NAA16Q6N069 864 aaPredicted RBP11.07□□□□□ -0.64
SSH2-209ENST00000579954 ZSCAN29Q8IWY8 852 aaPredicted RBP11.07□□□□□ -0.64
SSH2-209ENST00000579954 CDAN1Q8IWY9 1227 aa11.07□□□□□ -0.64
SSH2-209ENST00000579954 MRIQ9BWK5 157 aa11.07□□□□□ -0.64
SSH2-209ENST00000579954 SUPT16HQ9Y5B9 1047 aaKnown RBP11.07□□□□□ -0.64
SSH2-209ENST00000579954 PCNTO95613 3336 aa11.06□□□□□ -0.64
SSH2-209ENST00000579954 CYP2E1P05181 493 aaPredicted RBP11.06□□□□□ -0.64
SSH2-209ENST00000579954 SLC10A3P09131 477 aa11.06□□□□□ -0.64
SSH2-209ENST00000579954 MAP2K2P36507 400 aa11.06□□□□□ -0.64
SSH2-209ENST00000579954 RASAL3Q86YV0 1011 aa11.06□□□□□ -0.64
SSH2-209ENST00000579954 PIH1D3Q9NQM4 214 aaKnown RBP11.06□□□□□ -0.64
SSH2-209ENST00000579954 FOCADQ5VW36 1801 aa11.06□□□□□ -0.64
SSH2-209ENST00000579954 GAKO14976 1311 aa11.06□□□□□ -0.64
SSH2-209ENST00000579954 IRX6P78412 446 aaPredicted RBP11.05□□□□□ -0.64
SSH2-209ENST00000579954 KIF23Q02241 960 aaPredicted RBP11.05□□□□□ -0.64
SSH2-209ENST00000579954 NFIAQ12857 509 aa11.05□□□□□ -0.64
SSH2-209ENST00000579954 FAM83AQ86UY5 434 aa11.05□□□□□ -0.64
SSH2-209ENST00000579954 NSUN4Q96CB9 384 aaKnown RBP11.05□□□□□ -0.64
SSH2-209ENST00000579954 HOOK2Q96ED9 719 aa11.05□□□□□ -0.64
SSH2-209ENST00000579954 GPATCH3Q96I76 525 aa11.05□□□□□ -0.64
SSH2-209ENST00000579954 ZNF512BQ96KM6 892 aaPredicted RBP11.05□□□□□ -0.64
SSH2-209ENST00000579954 AATFQ9NY61 560 aaKnown RBP eCLIP11.05□□□□□ -0.64
SSH2-209ENST00000579954 TSKSQ9UJT2 592 aa11.05□□□□□ -0.64
SSH2-209ENST00000579954 PCDHB15Q9Y5E8 787 aa11.05□□□□□ -0.64
SSH2-209ENST00000579954 CSADQ9Y600 493 aa11.05□□□□□ -0.64
SSH2-209ENST00000579954 MYH1P12882 1939 aa11.05□□□□□ -0.64
SSH2-209ENST00000579954 NAV1Q8NEY1 1877 aa11.04□□□□□ -0.64
SSH2-209ENST00000579954 FAM155AB1AL88 458 aaPredicted RBP11.04□□□□□ -0.64
SSH2-209ENST00000579954 GOLIM4O00461 696 aa11.04□□□□□ -0.64
SSH2-209ENST00000579954 ZBTB22O15209 634 aa11.04□□□□□ -0.64
SSH2-209ENST00000579954 FOXN1O15353 648 aa11.04□□□□□ -0.64
SSH2-209ENST00000579954 BAG3O95817 575 aa11.04□□□□□ -0.64
SSH2-209ENST00000579954 CYP7A1P22680 504 aa11.04□□□□□ -0.64
SSH2-209ENST00000579954 RGS3P49796 1198 aa11.04□□□□□ -0.64
SSH2-209ENST00000579954 MAP3K12Q12852 859 aa11.04□□□□□ -0.64
SSH2-209ENST00000579954 TTF1Q15361 905 aaPredicted RBP11.04□□□□□ -0.64
SSH2-209ENST00000579954 DCAF15Q66K64 600 aa11.04□□□□□ -0.64
SSH2-209ENST00000579954 MIGA2Q7L4E1 593 aa11.04□□□□□ -0.64
SSH2-209ENST00000579954 TEX11Q8IYF3 940 aa11.04□□□□□ -0.64
SSH2-209ENST00000579954 MAGEB6Q8N7X4 407 aa11.04□□□□□ -0.64
SSH2-209ENST00000579954 SLC10A4Q96EP9 437 aa11.04□□□□□ -0.64
SSH2-209ENST00000579954 CLMNQ96JQ2 1002 aa11.04□□□□□ -0.64
SSH2-209ENST00000579954 TEPSINQ96N21 525 aa11.04□□□□□ -0.64
SSH2-209ENST00000579954 ZIC5Q96T25 663 aa11.04□□□□□ -0.64
SSH2-209ENST00000579954 ANTXR1Q9H6X2 564 aa11.04□□□□□ -0.64
SSH2-209ENST00000579954 ELP3Q9H9T3 547 aa11.04□□□□□ -0.64
SSH2-209ENST00000579954 RNF216Q9NWF9 866 aaPredicted RBP11.04□□□□□ -0.64
SSH2-209ENST00000579954 ATAD5Q96QE3 1844 aa11.04□□□□□ -0.64
SSH2-209ENST00000579954 RPAP1Q9BWH6 1393 aaPredicted RBP11.03□□□□□ -0.64
SSH2-209ENST00000579954 USP2O75604 605 aaPredicted RBP11.03□□□□□ -0.64
SSH2-209ENST00000579954 FKBP1CQ5VVH2 108 aa11.03□□□□□ -0.64
SSH2-209ENST00000579954 ANKRD13AQ8IZ07 590 aa11.03□□□□□ -0.64
SSH2-209ENST00000579954 MIGA1Q8NAN2 632 aa11.03□□□□□ -0.64
SSH2-209ENST00000579954 EXOC6Q8TAG9 804 aa11.03□□□□□ -0.64
SSH2-209ENST00000579954 FAM151AQ8WW52 585 aa11.03□□□□□ -0.64
SSH2-209ENST00000579954 WRNIP1Q96S55 665 aa11.03□□□□□ -0.64
SSH2-209ENST00000579954 CSRNP1Q96S65 589 aa11.03□□□□□ -0.64
SSH2-209ENST00000579954 BOLA2Q9H3K6 86 aa11.03□□□□□ -0.64
SSH2-209ENST00000579954 DCTPP1Q9H773 170 aa11.03□□□□□ -0.64
SSH2-209ENST00000579954 WBP1LQ9NX94 342 aa11.03□□□□□ -0.64
SSH2-209ENST00000579954 FAM198AQ9UFP1 575 aa11.03□□□□□ -0.64
SSH2-209ENST00000579954 DOCK1Q14185 1865 aa11.02□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms