RNA–Protein interactions for RNA: ENST00000579081.5

NF1-219, Transcript of neurofibromin 1, humanhuman

TSL 1 (best)

Gene NF1, Length 8,788 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-219ENST00000579081 KRT5P13647 590 aa5.72□□□□□ -1.49
NF1-219ENST00000579081 RTN1Q16799 776 aa5.72□□□□□ -1.49
NF1-219ENST00000579081 SPOUT1Q5T280 376 aaKnown RBP5.72□□□□□ -1.49
NF1-219ENST00000579081 USHBP1Q8N6Y0 703 aa5.72□□□□□ -1.49
NF1-219ENST00000579081 RRP36Q96EU6 259 aaKnown RBP5.72□□□□□ -1.49
NF1-219ENST00000579081 CCDC42Q96M95 316 aa5.72□□□□□ -1.49
NF1-219ENST00000579081 LARP6Q9BRS8 491 aaKnown RBP5.72□□□□□ -1.49
NF1-219ENST00000579081 ALG1Q9BT22 464 aa5.72□□□□□ -1.49
NF1-219ENST00000579081 ARFGAP3Q9NP61 516 aa5.72□□□□□ -1.49
NF1-219ENST00000579081 ECHDC1Q9NTX5 307 aa5.72□□□□□ -1.49
NF1-219ENST00000579081 LCMT1Q9UIC8 334 aa5.72□□□□□ -1.49
NF1-219ENST00000579081 SBDSQ9Y3A5 250 aaKnown RBP eCLIP5.72□□□□□ -1.49
NF1-219ENST00000579081 SHANK2Q9UPX8 1470 aa5.72□□□□□ -1.49
NF1-219ENST00000579081 HARSP12081 509 aaKnown RBP5.72□□□□□ -1.49
NF1-219ENST00000579081 TCP11Q8WWU5 503 aa5.72□□□□□ -1.49
NF1-219ENST00000579081 POP5Q969H6 163 aaKnown RBP5.72□□□□□ -1.49
NF1-219ENST00000579081 KIF2CQ99661 725 aa5.72□□□□□ -1.49
NF1-219ENST00000579081 BACH2Q9BYV9 841 aa5.72□□□□□ -1.49
NF1-219ENST00000579081 CNNM2Q9H8M5 875 aa5.72□□□□□ -1.49
NF1-219ENST00000579081 DBF4Q9UBU7 674 aaPredicted RBP5.72□□□□□ -1.49
NF1-219ENST00000579081 POTEB3A0JP26 581 aa5.72□□□□□ -1.49
NF1-219ENST00000579081 BICDL2A1A5D9 508 aa5.72□□□□□ -1.49
NF1-219ENST00000579081 TNNI2P48788 182 aa5.72□□□□□ -1.49
NF1-219ENST00000579081 HDAC1Q13547 482 aaPredicted RBP5.72□□□□□ -1.49
NF1-219ENST00000579081 RILPL1Q5EBL4 403 aa5.72□□□□□ -1.49
NF1-219ENST00000579081 GJC2Q5T442 439 aaPredicted RBP5.72□□□□□ -1.49
NF1-219ENST00000579081 GKAP1Q5VSY0 366 aaPredicted RBP5.72□□□□□ -1.49
NF1-219ENST00000579081 POTEBQ6S5H4 581 aa5.72□□□□□ -1.49
NF1-219ENST00000579081 EP400NLQ6ZTU2 488 aa5.72□□□□□ -1.49
NF1-219ENST00000579081 TNPO1Q92973 898 aaKnown RBP5.72□□□□□ -1.49
NF1-219ENST00000579081 NAP1L4Q99733 375 aaKnown RBP5.72□□□□□ -1.49
NF1-219ENST00000579081 ZSCAN16Q9H4T2 348 aaPredicted RBP5.72□□□□□ -1.49
NF1-219ENST00000579081 FAN1Q9Y2M0 1017 aa5.72□□□□□ -1.49
NF1-219ENST00000579081 SSH2Q76I76 1423 aa5.72□□□□□ -1.49
NF1-219ENST00000579081 FOXP2O15409 715 aa5.71□□□□□ -1.49
NF1-219ENST00000579081 TRIM14Q14142 442 aa5.71□□□□□ -1.49
NF1-219ENST00000579081 ZNF804AQ7Z570 1209 aa5.71□□□□□ -1.49
NF1-219ENST00000579081 ARHGAP18Q8N392 663 aa5.71□□□□□ -1.49
NF1-219ENST00000579081 PIP4K2CQ8TBX8 421 aa5.71□□□□□ -1.49
NF1-219ENST00000579081 PSPC1Q8WXF1 523 aaKnown RBP5.71□□□□□ -1.49
NF1-219ENST00000579081 IFT81Q8WYA0 676 aa5.71□□□□□ -1.49
NF1-219ENST00000579081 KIFAP3Q92845 792 aa5.71□□□□□ -1.49
NF1-219ENST00000579081 SNX21Q969T3 373 aa5.71□□□□□ -1.49
NF1-219ENST00000579081 NUDT16Q96DE0 195 aaKnown RBP5.71□□□□□ -1.49
NF1-219ENST00000579081 NRDE2Q9H7Z3 1164 aa5.71□□□□□ -1.49
NF1-219ENST00000579081 HMG20BQ9P0W2 317 aa5.71□□□□□ -1.49
NF1-219ENST00000579081 CADPSQ9ULU8 1353 aa5.71□□□□□ -1.49
NF1-219ENST00000579081 POGZQ7Z3K3 1410 aa5.71□□□□□ -1.49
NF1-219ENST00000579081 NBPF8Q3BBV2 869 aa5.71□□□□□ -1.49
NF1-219ENST00000579081 NBPF14Q5TI25 921 aa5.71□□□□□ -1.49
NF1-219ENST00000579081 DNAI1Q9UI46 699 aa5.71□□□□□ -1.49
NF1-219ENST00000579081 SSFA2P28290 1259 aa5.71□□□□□ -1.5
NF1-219ENST00000579081 KRT9P35527 623 aa5.71□□□□□ -1.5
NF1-219ENST00000579081 PPP2R5DQ14738 602 aa5.71□□□□□ -1.5
NF1-219ENST00000579081 TSNAXIP1Q2TAA8 658 aa5.71□□□□□ -1.5
NF1-219ENST00000579081 BSDC1Q9NW68 430 aaPredicted RBP5.71□□□□□ -1.5
NF1-219ENST00000579081 TRIM35Q9UPQ4 493 aa5.71□□□□□ -1.5
NF1-219ENST00000579081 ABCA5Q8WWZ7 1642 aa5.71□□□□□ -1.5
NF1-219ENST00000579081 KIF24Q5T7B8 1368 aa5.71□□□□□ -1.5
NF1-219ENST00000579081 HNRNPCL1O60812 293 aaKnown RBP5.71□□□□□ -1.5
NF1-219ENST00000579081 SNAPC5O75971 98 aa5.71□□□□□ -1.5
NF1-219ENST00000579081 YY1P25490 414 aa5.71□□□□□ -1.5
NF1-219ENST00000579081 MCM6Q14566 821 aa5.71□□□□□ -1.5
NF1-219ENST00000579081 TSC22D1Q15714 1073 aa5.71□□□□□ -1.5
NF1-219ENST00000579081 CCDC170Q8IYT3 715 aa5.71□□□□□ -1.5
NF1-219ENST00000579081 DNAJC25Q9H1X3 360 aa5.71□□□□□ -1.5
NF1-219ENST00000579081 PPME1Q9Y570 386 aa5.71□□□□□ -1.5
NF1-219ENST00000579081 DRP2Q13474 957 aa5.71□□□□□ -1.5
NF1-219ENST00000579081 NAA16Q6N069 864 aaPredicted RBP5.71□□□□□ -1.5
NF1-219ENST00000579081 ZMAT2Q96NC0 199 aaKnown RBP5.71□□□□□ -1.5
NF1-219ENST00000579081 NOX5Q96PH1 765 aa5.71□□□□□ -1.5
NF1-219ENST00000579081 NBPF3Q9H094 633 aa5.71□□□□□ -1.5
NF1-219ENST00000579081 FGD6Q6ZV73 1430 aa5.71□□□□□ -1.5
NF1-219ENST00000579081 URB2Q14146 1524 aaKnown RBP5.71□□□□□ -1.5
NF1-219ENST00000579081 A0A1B0GW55 424 aa5.71□□□□□ -1.5
NF1-219ENST00000579081 EBAG9O00559 213 aa5.71□□□□□ -1.5
NF1-219ENST00000579081 CEP104O60308 925 aa5.71□□□□□ -1.5
NF1-219ENST00000579081 FLOT1O75955 427 aa5.71□□□□□ -1.5
NF1-219ENST00000579081 DUX4L2P0CJ85 424 aa5.71□□□□□ -1.5
NF1-219ENST00000579081 DUX4L3P0CJ86 424 aa5.71□□□□□ -1.5
NF1-219ENST00000579081 DUX4L4P0CJ87 422 aa5.71□□□□□ -1.5
NF1-219ENST00000579081 DUX4L5P0CJ88 424 aa5.71□□□□□ -1.5
NF1-219ENST00000579081 DUX4L6P0CJ89 424 aa5.71□□□□□ -1.5
NF1-219ENST00000579081 DUX4L7P0CJ90 424 aa5.71□□□□□ -1.5
NF1-219ENST00000579081 TRPC3Q13507 836 aa5.71□□□□□ -1.5
NF1-219ENST00000579081 PHLDB2Q86SQ0 1253 aa5.71□□□□□ -1.5
NF1-219ENST00000579081 DHX58Q96C10 678 aa5.71□□□□□ -1.5
NF1-219ENST00000579081 DUX4Q9UBX2 424 aa5.71□□□□□ -1.5
NF1-219ENST00000579081 RPL13P26373 211 aaKnown RBP5.71□□□□□ -1.5
NF1-219ENST00000579081 RAPGEF1Q13905 1077 aa5.71□□□□□ -1.5
NF1-219ENST00000579081 LIN9Q5TKA1 542 aa5.71□□□□□ -1.5
NF1-219ENST00000579081 LMNTD2Q8IXW0 634 aa5.71□□□□□ -1.5
NF1-219ENST00000579081 INTS4Q96HW7 963 aaKnown RBP5.71□□□□□ -1.5
NF1-219ENST00000579081 SETDB2Q96T68 719 aa5.71□□□□□ -1.5
NF1-219ENST00000579081 CLSTN2Q9H4D0 955 aa5.71□□□□□ -1.5
NF1-219ENST00000579081 VCX3AQ9NNX9 186 aa5.71□□□□□ -1.5
NF1-219ENST00000579081 BATF3Q9NR55 127 aa5.71□□□□□ -1.5
NF1-219ENST00000579081 SLC52A1Q9NWF4 448 aa5.71□□□□□ -1.5
NF1-219ENST00000579081 BIVM-ERCC5R4GMW8 1640 aa5.71□□□□□ -1.5
NF1-219ENST00000579081 SCAF11Q99590 1463 aaKnown RBP5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms