RNA–Protein interactions for RNA: ENST00000578875.5

PPP4R1-211, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 4

Gene PPP4R1, Length 580 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-211ENST00000578875 PDE3AQ14432 1141 aa10.35□□□□□ -0.75
PPP4R1-211ENST00000578875 POTEEQ6S8J3 1075 aa10.35□□□□□ -0.75
PPP4R1-211ENST00000578875 PARK7Q99497 189 aaKnown RBP10.35□□□□□ -0.75
PPP4R1-211ENST00000578875 C1QTNF1Q9BXJ1 281 aa10.35□□□□□ -0.75
PPP4R1-211ENST00000578875 GJD2Q9UKL4 321 aa10.35□□□□□ -0.75
PPP4R1-211ENST00000578875 TTF2Q9UNY4 1162 aaKnown RBP10.35□□□□□ -0.75
PPP4R1-211ENST00000578875 IL1R1P14778 569 aa10.34□□□□□ -0.75
PPP4R1-211ENST00000578875 CHRNDQ07001 517 aa10.34□□□□□ -0.75
PPP4R1-211ENST00000578875 CCDC85BQ15834 202 aaPredicted RBP10.34□□□□□ -0.75
PPP4R1-211ENST00000578875 HDGFL1Q5TGJ6 251 aa10.34□□□□□ -0.75
PPP4R1-211ENST00000578875 ANKRD13CQ8N6S4 541 aa10.34□□□□□ -0.75
PPP4R1-211ENST00000578875 ATXN2LQ8WWM7 1075 aaKnown RBP10.34□□□□□ -0.75
PPP4R1-211ENST00000578875 ARIH1Q9Y4X5 557 aaPredicted RBP10.34□□□□□ -0.75
PPP4R1-211ENST00000578875 ECM29Q5VYK3 1845 aa10.34□□□□□ -0.75
PPP4R1-211ENST00000578875 HMGCRP04035 888 aa10.33□□□□□ -0.76
PPP4R1-211ENST00000578875 PPP2R1AP30153 589 aa10.33□□□□□ -0.76
PPP4R1-211ENST00000578875 CRKP46108 304 aa10.33□□□□□ -0.76
PPP4R1-211ENST00000578875 KCNJ4P48050 445 aa10.33□□□□□ -0.76
PPP4R1-211ENST00000578875 TNNI2P48788 182 aa10.33□□□□□ -0.76
PPP4R1-211ENST00000578875 ATN1P54259 1190 aaPredicted RBP10.33□□□□□ -0.76
PPP4R1-211ENST00000578875 FKBP1AP62942 108 aaKnown RBP10.33□□□□□ -0.76
PPP4R1-211ENST00000578875 SMAD3P84022 425 aaKnown RBP10.33□□□□□ -0.76
PPP4R1-211ENST00000578875 CCDC191Q8NCU4 936 aa10.33□□□□□ -0.76
PPP4R1-211ENST00000578875 TRIB2Q92519 343 aa10.33□□□□□ -0.76
PPP4R1-211ENST00000578875 COA7Q96BR5 231 aa10.33□□□□□ -0.76
PPP4R1-211ENST00000578875 ANKRD2Q9GZV1 360 aa10.33□□□□□ -0.76
PPP4R1-211ENST00000578875 TCF20Q9UGU0 1960 aaKnown RBP10.32□□□□□ -0.76
PPP4R1-211ENST00000578875 HSP90B1P14625 803 aaKnown RBP10.32□□□□□ -0.76
PPP4R1-211ENST00000578875 MRPS5P82675 430 aaKnown RBP10.32□□□□□ -0.76
PPP4R1-211ENST00000578875 LHX8Q68G74 356 aa10.32□□□□□ -0.76
PPP4R1-211ENST00000578875 BADQ92934 168 aa10.32□□□□□ -0.76
PPP4R1-211ENST00000578875 SENP6Q9GZR1 1112 aaPredicted RBP10.32□□□□□ -0.76
PPP4R1-211ENST00000578875 CWC25Q9NXE8 425 aaPredicted RBP10.32□□□□□ -0.76
PPP4R1-211ENST00000578875 DBF4Q9UBU7 674 aaPredicted RBP10.32□□□□□ -0.76
PPP4R1-211ENST00000578875 SERPINA10Q9UK55 444 aa10.32□□□□□ -0.76
PPP4R1-211ENST00000578875 HCN4Q9Y3Q4 1203 aa10.32□□□□□ -0.76
PPP4R1-211ENST00000578875 MUC6Q6W4X9 2439 aa10.32□□□□□ -0.76
PPP4R1-211ENST00000578875 BMP1P13497 986 aa10.31□□□□□ -0.76
PPP4R1-211ENST00000578875 CCND3P30281 292 aaPredicted RBP10.31□□□□□ -0.76
PPP4R1-211ENST00000578875 IGHMBP2P38935 993 aaKnown RBP10.31□□□□□ -0.76
PPP4R1-211ENST00000578875 MRE11P49959 708 aa10.31□□□□□ -0.76
PPP4R1-211ENST00000578875 RIPK4P57078 832 aa10.31□□□□□ -0.76
PPP4R1-211ENST00000578875 MFSD14BQ5SR56 506 aa10.31□□□□□ -0.76
PPP4R1-211ENST00000578875 GADL1Q6ZQY3 521 aa10.31□□□□□ -0.76
PPP4R1-211ENST00000578875 KHSRPQ92945 711 aaKnown RBP eCLIP10.31□□□□□ -0.761e-7■■■□□ 19
PPP4R1-211ENST00000578875 C11orf16Q9NQ32 467 aa10.31□□□□□ -0.76
PPP4R1-211ENST00000578875 HYPKQ9NX55 129 aa10.31□□□□□ -0.76
PPP4R1-211ENST00000578875 ZNF112Q9UJU3 913 aa10.31□□□□□ -0.76
PPP4R1-211ENST00000578875 LAS1LQ9Y4W2 734 aaKnown RBP10.31□□□□□ -0.76
PPP4R1-211ENST00000578875 CDH23Q9H251 3354 aa10.31□□□□□ -0.76
PPP4R1-211ENST00000578875 SPEF2Q9C093 1822 aa10.3□□□□□ -0.76
PPP4R1-211ENST00000578875 FAM86C2PA6NEL3 165 aa10.3□□□□□ -0.76
PPP4R1-211ENST00000578875 CHL1O00533 1208 aa10.3□□□□□ -0.76
PPP4R1-211ENST00000578875 PEX10O60683 326 aa10.3□□□□□ -0.76
PPP4R1-211ENST00000578875 SLURP2P0DP57 97 aa10.3□□□□□ -0.76
PPP4R1-211ENST00000578875 PRKAR2AP13861 404 aaKnown RBP10.3□□□□□ -0.76
PPP4R1-211ENST00000578875 CYP2B6P20813 491 aa10.3□□□□□ -0.76
PPP4R1-211ENST00000578875 EPHB4P54760 987 aa10.3□□□□□ -0.76
PPP4R1-211ENST00000578875 MAP3K21Q5TCX8 1036 aa10.3□□□□□ -0.76
PPP4R1-211ENST00000578875 C15orf52Q6ZUT6 534 aaKnown RBP10.3□□□□□ -0.76
PPP4R1-211ENST00000578875 ZNF341Q9BYN7 854 aa10.3□□□□□ -0.76
PPP4R1-211ENST00000578875 THEGQ9P2T0 379 aa10.3□□□□□ -0.76
PPP4R1-211ENST00000578875 ZHX2Q9Y6X8 837 aa10.3□□□□□ -0.76
PPP4R1-211ENST00000578875 CXCL11O14625 94 aa10.29□□□□□ -0.76
PPP4R1-211ENST00000578875 PLIN1O60240 522 aa10.29□□□□□ -0.76
PPP4R1-211ENST00000578875 IGKV5-2P06315 115 aa10.29□□□□□ -0.76
PPP4R1-211ENST00000578875 NEFMP07197 916 aa10.29□□□□□ -0.76
PPP4R1-211ENST00000578875 ITGA6P23229 1130 aa10.29□□□□□ -0.76
PPP4R1-211ENST00000578875 CACNB2Q08289 660 aaPredicted RBP10.29□□□□□ -0.76
PPP4R1-211ENST00000578875 ADGRE1Q14246 886 aa10.29□□□□□ -0.76
PPP4R1-211ENST00000578875 SH3RF1Q7Z6J0 888 aa10.29□□□□□ -0.76
PPP4R1-211ENST00000578875 MPHOSPH8Q99549 860 aa10.29□□□□□ -0.76
PPP4R1-211ENST00000578875 METTL22Q9BUU2 404 aaPredicted RBP10.29□□□□□ -0.76
PPP4R1-211ENST00000578875 FRMD4AQ9P2Q2 1039 aaPredicted RBP10.29□□□□□ -0.76
PPP4R1-211ENST00000578875 A0A0G2JLL6 359 aaPredicted RBP10.28□□□□□ -0.76
PPP4R1-211ENST00000578875 TFF2Q03403 129 aa10.28□□□□□ -0.76
PPP4R1-211ENST00000578875 GOLGA2Q08379 1002 aa10.28□□□□□ -0.76
PPP4R1-211ENST00000578875 TMEM31Q5JXX7 168 aa10.28□□□□□ -0.76
PPP4R1-211ENST00000578875 DCAF15Q66K64 600 aa10.28□□□□□ -0.76
PPP4R1-211ENST00000578875 ZNF804AQ7Z570 1209 aa10.28□□□□□ -0.76
PPP4R1-211ENST00000578875 PRRT2Q7Z6L0 340 aaPredicted RBP10.28□□□□□ -0.76
PPP4R1-211ENST00000578875 CCDC84Q86UT8 332 aaPredicted RBP10.28□□□□□ -0.76
PPP4R1-211ENST00000578875 TDRD7Q8NHU6 1098 aaKnown RBP10.28□□□□□ -0.76
PPP4R1-211ENST00000578875 SMCR8Q8TEV9 937 aaPredicted RBP10.28□□□□□ -0.76
PPP4R1-211ENST00000578875 PRDM12Q9H4Q4 367 aa10.28□□□□□ -0.76
PPP4R1-211ENST00000578875 ZNF576Q9H609 170 aa10.28□□□□□ -0.76
PPP4R1-211ENST00000578875 BABAM1Q9NWV8 329 aa10.28□□□□□ -0.76
PPP4R1-211ENST00000578875 CACNA1AO00555 2505 aa10.28□□□□□ -0.76
PPP4R1-211ENST00000578875 TRIM43BA6NCK2 446 aa10.27□□□□□ -0.77
PPP4R1-211ENST00000578875 ITGB8P26012 769 aa10.27□□□□□ -0.77
PPP4R1-211ENST00000578875 GYG1P46976 350 aa10.27□□□□□ -0.77
PPP4R1-211ENST00000578875 KCNQ1P51787 676 aa10.27□□□□□ -0.77
PPP4R1-211ENST00000578875 RTP1P59025 263 aa10.27□□□□□ -0.77
PPP4R1-211ENST00000578875 TCP10Q12799 353 aa10.27□□□□□ -0.77
PPP4R1-211ENST00000578875 CCL14Q16627 93 aa10.27□□□□□ -0.77
PPP4R1-211ENST00000578875 CWF19L2Q2TBE0 894 aaKnown RBP10.27□□□□□ -0.77
PPP4R1-211ENST00000578875 DUSP27Q5VZP5 1158 aa10.27□□□□□ -0.77
PPP4R1-211ENST00000578875 APOBEC3HQ6NTF7 200 aaKnown RBP10.27□□□□□ -0.77
PPP4R1-211ENST00000578875 FASTKD5Q7L8L6 764 aaKnown RBP10.27□□□□□ -0.77
PPP4R1-211ENST00000578875 TRIM43Q96BQ3 446 aaPredicted RBP10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms