RNA–Protein interactions for RNA: ENST00000578845.2

CDKN2A-212, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 2 BASIC

Gene CDKN2A, Length 678 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-212ENST00000578845 ZGPATQ8N5A5 531 aaKnown RBP28.28■■■□□ 2.12
CDKN2A-212ENST00000578845 MS4A4AQ96JQ5 239 aa28.28■■■□□ 2.12
CDKN2A-212ENST00000578845 CSADQ9Y600 493 aa28.28■■■□□ 2.12
CDKN2A-212ENST00000578845 HTTP42858 3142 aa28.27■■■□□ 2.12
CDKN2A-212ENST00000578845 RASGRF1Q13972 1273 aa28.27■■■□□ 2.12
CDKN2A-212ENST00000578845 OTUD7BQ6GQQ9 843 aa28.27■■■□□ 2.12
CDKN2A-212ENST00000578845 CDC42EP5Q6NZY7 148 aa28.27■■■□□ 2.12
CDKN2A-212ENST00000578845 TMEM57Q8N5G2 664 aa28.27■■■□□ 2.12
CDKN2A-212ENST00000578845 FAM151AQ8WW52 585 aa28.27■■■□□ 2.12
CDKN2A-212ENST00000578845 PTPN18Q99952 460 aa28.27■■■□□ 2.12
CDKN2A-212ENST00000578845 XAGE2Q96GT9 111 aa28.26■■■□□ 2.11
CDKN2A-212ENST00000578845 GAKO14976 1311 aa28.25■■■□□ 2.11
CDKN2A-212ENST00000578845 PNMA6EA0A0J9YXQ4 647 aa28.25■■■□□ 2.11
CDKN2A-212ENST00000578845 SPDYE5A6NIY4 337 aa28.25■■■□□ 2.11
CDKN2A-212ENST00000578845 MVPQ14764 893 aaKnown RBP28.25■■■□□ 2.11
CDKN2A-212ENST00000578845 DCAF15Q66K64 600 aa28.25■■■□□ 2.11
CDKN2A-212ENST00000578845 CNKSR2Q8WXI2 1034 aa28.25■■■□□ 2.11
CDKN2A-212ENST00000578845 SNCAIPQ9Y6H5 919 aa28.25■■■□□ 2.11
CDKN2A-212ENST00000578845 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP28.25■■■□□ 2.11
CDKN2A-212ENST00000578845 MLLT1Q03111 559 aaPredicted RBP28.24■■■□□ 2.11
CDKN2A-212ENST00000578845 WRNIP1Q96S55 665 aa28.24■■■□□ 2.11
CDKN2A-212ENST00000578845 HPS5Q9UPZ3 1129 aa28.24■■■□□ 2.11
CDKN2A-212ENST00000578845 GTF2A2P52657 109 aa28.23■■■□□ 2.11
CDKN2A-212ENST00000578845 NFIAQ12857 509 aa28.23■■■□□ 2.11
CDKN2A-212ENST00000578845 ZBED9Q6R2W3 1325 aa28.22■■■□□ 2.11
CDKN2A-212ENST00000578845 CRHR2Q13324 411 aa28.22■■■□□ 2.11
CDKN2A-212ENST00000578845 FBXO46Q6PJ61 603 aaPredicted RBP28.22■■■□□ 2.11
CDKN2A-212ENST00000578845 BRI3BPQ8WY22 251 aa28.22■■■□□ 2.11
CDKN2A-212ENST00000578845 FAM198AQ9UFP1 575 aa28.22■■■□□ 2.11
CDKN2A-212ENST00000578845 RFX7Q2KHR2 1363 aa28.22■■■□□ 2.11
CDKN2A-212ENST00000578845 ERO1BQ86YB8 467 aa28.21■■■□□ 2.11
CDKN2A-212ENST00000578845 OTUD5Q96G74 571 aa28.21■■■□□ 2.11
CDKN2A-212ENST00000578845 FAM163AQ96GL9 167 aaPredicted RBP28.21■■■□□ 2.11
CDKN2A-212ENST00000578845 ZNF341Q9BYN7 854 aa28.21■■■□□ 2.11
CDKN2A-212ENST00000578845 USP40Q9NVE5 1235 aa28.21■■■□□ 2.11
CDKN2A-212ENST00000578845 POLA2Q14181 598 aa28.2■■■□□ 2.1
CDKN2A-212ENST00000578845 ZKSCAN4Q969J2 545 aaPredicted RBP28.2■■■□□ 2.1
CDKN2A-212ENST00000578845 IDI2Q9BXS1 227 aa28.2■■■□□ 2.1
CDKN2A-212ENST00000578845 ZNF112Q9UJU3 913 aa28.2■■■□□ 2.1
CDKN2A-212ENST00000578845 CCL15-CCL14A0A0B4J2E2 113 aa28.19■■■□□ 2.1
CDKN2A-212ENST00000578845 G3BP1Q13283 466 aaKnown RBP eCLIP28.19■■■□□ 2.1
CDKN2A-212ENST00000578845 CCL15Q16663 113 aa28.19■■■□□ 2.1
CDKN2A-212ENST00000578845 SPTY2D1Q68D10 685 aaPredicted RBP28.19■■■□□ 2.1
CDKN2A-212ENST00000578845 MYH2Q9UKX2 1941 aa28.18■■■□□ 2.1
CDKN2A-212ENST00000578845 ARID4AP29374 1257 aaPredicted RBP28.18■■■□□ 2.1
CDKN2A-212ENST00000578845 TCP10Q12799 353 aa28.18■■■□□ 2.1
CDKN2A-212ENST00000578845 DZIP1Q86YF9 867 aaKnown RBP28.18■■■□□ 2.1
CDKN2A-212ENST00000578845 SLF2Q8IX21 1173 aa28.18■■■□□ 2.1
CDKN2A-212ENST00000578845 SSH3Q8TE77 659 aa28.18■■■□□ 2.1
CDKN2A-212ENST00000578845 NEUROD6Q96NK8 337 aa28.18■■■□□ 2.1
CDKN2A-212ENST00000578845 ABCF2Q9UG63 623 aa28.18■■■□□ 2.1
CDKN2A-212ENST00000578845 TNRC18O15417 2968 aaPredicted RBP28.18■■■□□ 2.1
CDKN2A-212ENST00000578845 ATRNL1Q5VV63 1379 aa28.17■■■□□ 2.1
CDKN2A-212ENST00000578845 PPIL2Q13356 520 aa28.17■■■□□ 2.1
CDKN2A-212ENST00000578845 MIGA2Q7L4E1 593 aa28.17■■■□□ 2.1
CDKN2A-212ENST00000578845 FTSJ3Q8IY81 847 aaKnown RBP28.17■■■□□ 2.1
CDKN2A-212ENST00000578845 HMG20BQ9P0W2 317 aa28.17■■■□□ 2.1
CDKN2A-212ENST00000578845 ENTPD3O75355 529 aa28.16■■■□□ 2.1
CDKN2A-212ENST00000578845 ATP8B2P98198 1209 aa28.16■■■□□ 2.1
CDKN2A-212ENST00000578845 ERO1AQ96HE7 468 aa28.16■■■□□ 2.1
CDKN2A-212ENST00000578845 ZCCHC17Q9NP64 241 aaKnown RBP28.16■■■□□ 2.1
CDKN2A-212ENST00000578845 GPR108Q9NPR9 543 aa28.16■■■□□ 2.1
CDKN2A-212ENST00000578845 IRF6O14896 467 aa28.15■■■□□ 2.1
CDKN2A-212ENST00000578845 CETPP11597 493 aa28.15■■■□□ 2.1
CDKN2A-212ENST00000578845 RLBP1P12271 317 aa28.15■■■□□ 2.1
CDKN2A-212ENST00000578845 INPP5BP32019 993 aa28.15■■■□□ 2.1
CDKN2A-212ENST00000578845 PPATQ06203 517 aa28.15■■■□□ 2.1
CDKN2A-212ENST00000578845 NOL9Q5SY16 702 aaKnown RBP28.15■■■□□ 2.1
CDKN2A-212ENST00000578845 OTOP1Q7RTM1 612 aa28.15■■■□□ 2.1
CDKN2A-212ENST00000578845 FAM43AQ8N2R8 423 aa28.15■■■□□ 2.1
CDKN2A-212ENST00000578845 SPATA5Q8NB90 893 aa28.15■■■□□ 2.1
CDKN2A-212ENST00000578845 MROH7-TTC4A0A0A0MT08 1334 aa28.15■■■□□ 2.1
CDKN2A-212ENST00000578845 CENPFP49454 3210 aa28.14■■■□□ 2.1
CDKN2A-212ENST00000578845 ZBTB7BO15156 539 aaPredicted RBP28.14■■■□□ 2.1
CDKN2A-212ENST00000578845 RGS3P49796 1198 aa28.14■■■□□ 2.1
CDKN2A-212ENST00000578845 SOX10P56693 466 aa28.14■■■□□ 2.1
CDKN2A-212ENST00000578845 SNAPC2Q13487 334 aa28.14■■■□□ 2.1
CDKN2A-212ENST00000578845 ERICH6Q7L0X2 663 aa28.14■■■□□ 2.1
CDKN2A-212ENST00000578845 ZFPM1Q8IX07 1006 aa28.14■■■□□ 2.1
CDKN2A-212ENST00000578845 ZNF384Q8TF68 577 aa28.14■■■□□ 2.1
CDKN2A-212ENST00000578845 TRIM17Q9Y577 477 aa28.14■■■□□ 2.1
CDKN2A-212ENST00000578845 SP3Q02447 781 aa28.13■■■□□ 2.09
CDKN2A-212ENST00000578845 MECOMQ03112 1051 aa28.13■■■□□ 2.09
CDKN2A-212ENST00000578845 TAF1CQ15572 869 aaPredicted RBP28.13■■■□□ 2.09
CDKN2A-212ENST00000578845 GORABQ5T7V8 394 aa28.13■■■□□ 2.09
CDKN2A-212ENST00000578845 GPR75-ASB3A0A0A6YYF3 556 aa28.12■■■□□ 2.09
CDKN2A-212ENST00000578845 WDHD1O75717 1129 aaPredicted RBP28.12■■■□□ 2.09
CDKN2A-212ENST00000578845 BTDP43251 543 aa28.12■■■□□ 2.09
CDKN2A-212ENST00000578845 PI16Q6UXB8 463 aa28.12■■■□□ 2.09
CDKN2A-212ENST00000578845 ITPRIPQ8IWB1 547 aa28.12■■■□□ 2.09
CDKN2A-212ENST00000578845 ZFYVE28Q9HCC9 887 aa28.12■■■□□ 2.09
CDKN2A-212ENST00000578845 DOCK2Q92608 1830 aa28.11■■■□□ 2.09
CDKN2A-212ENST00000578845 UQCRFS1P1P0C7P4 283 aa28.11■■■□□ 2.09
CDKN2A-212ENST00000578845 MCAMP43121 646 aa28.11■■■□□ 2.09
CDKN2A-212ENST00000578845 MAP3K10Q02779 954 aa28.11■■■□□ 2.09
CDKN2A-212ENST00000578845 CD99L2Q8TCZ2 262 aa28.11■■■□□ 2.09
CDKN2A-212ENST00000578845 NSUN4Q96CB9 384 aaKnown RBP28.11■■■□□ 2.09
CDKN2A-212ENST00000578845 KCNH4Q9UQ05 1017 aa28.11■■■□□ 2.09
CDKN2A-212ENST00000578845 NOP58Q9Y2X3 529 aaKnown RBP28.11■■■□□ 2.09
CDKN2A-212ENST00000578845 NPM3O75607 178 aaKnown RBP28.1■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms