RNA–Protein interactions for RNA: ENST00000577539.1

VAPA-203, Transcript of VAMP associated protein A, humanhuman

Gene VAPA, Length 3,760 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-203ENST00000577539 PTK2Q05397 1052 aa6.35□□□□□ -1.39
VAPA-203ENST00000577539 RNF20Q5VTR2 975 aa6.35□□□□□ -1.39
VAPA-203ENST00000577539 LARP1BQ659C4 914 aaKnown RBP6.35□□□□□ -1.39
VAPA-203ENST00000577539 CREB3L3Q68CJ9 461 aa6.35□□□□□ -1.39
VAPA-203ENST00000577539 GTF3C2Q8WUA4 911 aaPredicted RBP6.35□□□□□ -1.39
VAPA-203ENST00000577539 FOXJ1Q92949 421 aa6.35□□□□□ -1.39
VAPA-203ENST00000577539 NEUROD6Q96NK8 337 aa6.35□□□□□ -1.39
VAPA-203ENST00000577539 CFHR5Q9BXR6 569 aa6.35□□□□□ -1.39
VAPA-203ENST00000577539 NALCNQ8IZF0 1738 aa6.35□□□□□ -1.39
VAPA-203ENST00000577539 EML3Q32P44 896 aa6.35□□□□□ -1.39
VAPA-203ENST00000577539 FAM173BQ6P4H8 233 aa6.35□□□□□ -1.39
VAPA-203ENST00000577539 ANKRD13DQ6ZTN6 518 aa6.35□□□□□ -1.39
VAPA-203ENST00000577539 CDKN2AIPQ9NXV6 580 aaPredicted RBP6.35□□□□□ -1.39
VAPA-203ENST00000577539 USP25Q9UHP3 1055 aa6.35□□□□□ -1.39
VAPA-203ENST00000577539 USP16Q9Y5T5 823 aa6.35□□□□□ -1.39
VAPA-203ENST00000577539 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP6.35□□□□□ -1.39
VAPA-203ENST00000577539 A0A087WZG4 1122 aa6.34□□□□□ -1.39
VAPA-203ENST00000577539 A0A0D9SFI3 127 aa6.34□□□□□ -1.39
VAPA-203ENST00000577539 HIP1O00291 1037 aa6.34□□□□□ -1.39
VAPA-203ENST00000577539 IGKV5-2P06315 115 aa6.34□□□□□ -1.39
VAPA-203ENST00000577539 HCLS1P14317 486 aaPredicted RBP6.34□□□□□ -1.39
VAPA-203ENST00000577539 PSMA5P28066 241 aa6.34□□□□□ -1.39
VAPA-203ENST00000577539 MTX1Q13505 466 aa6.34□□□□□ -1.39
VAPA-203ENST00000577539 SLFNL1Q499Z3 407 aa6.34□□□□□ -1.39
VAPA-203ENST00000577539 KMT5BQ4FZB7 885 aa6.34□□□□□ -1.39
VAPA-203ENST00000577539 TRMT44Q8IYL2 757 aaKnown RBP6.34□□□□□ -1.39
VAPA-203ENST00000577539 PNMA1Q8ND90 353 aa6.34□□□□□ -1.39
VAPA-203ENST00000577539 MARVELD3Q96A59 401 aa6.34□□□□□ -1.39
VAPA-203ENST00000577539 ZSCAN31Q96LW9 406 aaPredicted RBP6.34□□□□□ -1.39
VAPA-203ENST00000577539 TTC14Q96N46 770 aa6.34□□□□□ -1.39
VAPA-203ENST00000577539 NWD1Q149M9 1564 aa6.34□□□□□ -1.39
VAPA-203ENST00000577539 CABP4P57796 275 aa6.34□□□□□ -1.39
VAPA-203ENST00000577539 HSP90AA2PQ14568 343 aaPredicted RBP6.34□□□□□ -1.39
VAPA-203ENST00000577539 EPHA10Q5JZY3 1008 aa6.34□□□□□ -1.39
VAPA-203ENST00000577539 CCDC102BQ68D86 513 aa6.34□□□□□ -1.39
VAPA-203ENST00000577539 GIMAP6Q6P9H5 292 aa6.34□□□□□ -1.39
VAPA-203ENST00000577539 ZNF662Q6ZS27 426 aa6.34□□□□□ -1.39
VAPA-203ENST00000577539 CCDC39Q9UFE4 941 aa6.34□□□□□ -1.39
VAPA-203ENST00000577539 PXDNLA1KZ92 1463 aa6.34□□□□□ -1.39
VAPA-203ENST00000577539 PXDNQ92626 1479 aa6.34□□□□□ -1.39
VAPA-203ENST00000577539 NEURL1BA8MQ27 555 aa6.34□□□□□ -1.4
VAPA-203ENST00000577539 H3BRB1 525 aa6.34□□□□□ -1.4
VAPA-203ENST00000577539 EPB41L2O43491 1005 aaKnown RBP6.34□□□□□ -1.4
VAPA-203ENST00000577539 MCCD1P59942 119 aaPredicted RBP6.34□□□□□ -1.4
VAPA-203ENST00000577539 GTF2IP78347 998 aa6.34□□□□□ -1.4
VAPA-203ENST00000577539 GCKRQ14397 625 aa6.34□□□□□ -1.4
VAPA-203ENST00000577539 ME3Q16798 604 aa6.34□□□□□ -1.4
VAPA-203ENST00000577539 CCDC183Q5T5S1 534 aa6.34□□□□□ -1.4
VAPA-203ENST00000577539 VPS53Q5VIR6 699 aa6.34□□□□□ -1.4
VAPA-203ENST00000577539 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.34□□□□□ -1.4
VAPA-203ENST00000577539 IFNL2Q8IZJ0 200 aa6.34□□□□□ -1.4
VAPA-203ENST00000577539 KAZALD1Q96I82 304 aa6.34□□□□□ -1.4
VAPA-203ENST00000577539 SAP130Q9H0E3 1048 aa6.34□□□□□ -1.4
VAPA-203ENST00000577539 TUT1Q9H6E5 874 aaKnown RBP6.34□□□□□ -1.4
VAPA-203ENST00000577539 SLC52A2Q9HAB3 445 aa6.34□□□□□ -1.4
VAPA-203ENST00000577539 SH2B1Q9NRF2 756 aaPredicted RBP6.34□□□□□ -1.4
VAPA-203ENST00000577539 FMN2Q9NZ56 1722 aa6.34□□□□□ -1.4
VAPA-203ENST00000577539 ADGRL3Q9HAR2 1447 aa6.33□□□□□ -1.4
VAPA-203ENST00000577539 SLC27A2O14975 620 aa6.33□□□□□ -1.4
VAPA-203ENST00000577539 FOXK2Q01167 660 aa6.33□□□□□ -1.4
VAPA-203ENST00000577539 TFCP2Q12800 502 aa6.33□□□□□ -1.4
VAPA-203ENST00000577539 COL19A1Q14993 1142 aa6.33□□□□□ -1.4
VAPA-203ENST00000577539 DDX46Q7L014 1031 aaKnown RBP6.33□□□□□ -1.4
VAPA-203ENST00000577539 LRCH3Q96II8 777 aa6.33□□□□□ -1.4
VAPA-203ENST00000577539 HS3ST6Q96QI5 342 aa6.33□□□□□ -1.4
VAPA-203ENST00000577539 HRH3Q9Y5N1 445 aa6.33□□□□□ -1.4
VAPA-203ENST00000577539 ERBB3P21860 1342 aa6.33□□□□□ -1.4
VAPA-203ENST00000577539 NPHP3Q7Z494 1330 aa6.33□□□□□ -1.4
VAPA-203ENST00000577539 SNRPA1P09661 255 aaKnown RBP6.33□□□□□ -1.4
VAPA-203ENST00000577539 UBE2HP62256 183 aa6.33□□□□□ -1.4
VAPA-203ENST00000577539 TMC7Q7Z402 723 aa6.33□□□□□ -1.4
VAPA-203ENST00000577539 EMID1Q96A84 441 aaPredicted RBP6.33□□□□□ -1.4
VAPA-203ENST00000577539 ZNF830Q96NB3 372 aaPredicted RBP6.33□□□□□ -1.4
VAPA-203ENST00000577539 FZD6O60353 706 aa6.33□□□□□ -1.4
VAPA-203ENST00000577539 PPFIA3O75145 1194 aa6.33□□□□□ -1.4
VAPA-203ENST00000577539 CCDC129Q6ZRS4 1044 aa6.33□□□□□ -1.4
VAPA-203ENST00000577539 RGL4Q8IZJ4 473 aa6.33□□□□□ -1.4
VAPA-203ENST00000577539 DDX11Q96FC9 970 aa6.33□□□□□ -1.4
VAPA-203ENST00000577539 SPSB2Q99619 263 aa6.33□□□□□ -1.4
VAPA-203ENST00000577539 METTL22Q9BUU2 404 aaPredicted RBP6.33□□□□□ -1.4
VAPA-203ENST00000577539 LRRC2Q9BYS8 371 aa6.33□□□□□ -1.4
VAPA-203ENST00000577539 C19orf44Q9H6X5 657 aa6.33□□□□□ -1.4
VAPA-203ENST00000577539 TPCN1Q9ULQ1 816 aa6.33□□□□□ -1.4
VAPA-203ENST00000577539 MTMR6Q9Y217 621 aa6.33□□□□□ -1.4
VAPA-203ENST00000577539 ZKSCAN5Q9Y2L8 839 aa6.33□□□□□ -1.4
VAPA-203ENST00000577539 PHKG2P15735 406 aa6.32□□□□□ -1.4
VAPA-203ENST00000577539 HDLBPQ00341 1268 aaKnown RBP6.32□□□□□ -1.4
VAPA-203ENST00000577539 KIAA2012Q0VF49 1180 aa6.32□□□□□ -1.4
VAPA-203ENST00000577539 NECTIN1Q15223 517 aa6.32□□□□□ -1.4
VAPA-203ENST00000577539 CAMK4Q16566 473 aa6.32□□□□□ -1.4
VAPA-203ENST00000577539 LMBR1LQ6UX01 489 aa6.32□□□□□ -1.4
VAPA-203ENST00000577539 ZNF589Q86UQ0 364 aaPredicted RBP6.32□□□□□ -1.4
VAPA-203ENST00000577539 FMNL2Q96PY5 1086 aa6.32□□□□□ -1.4
VAPA-203ENST00000577539 DBNDD2Q9BQY9 259 aa6.32□□□□□ -1.4
VAPA-203ENST00000577539 NOL7Q9UMY1 257 aaKnown RBP6.32□□□□□ -1.4
VAPA-203ENST00000577539 TAF6LQ9Y6J9 622 aa6.32□□□□□ -1.4
VAPA-203ENST00000577539 RPAP1Q9BWH6 1393 aaPredicted RBP6.32□□□□□ -1.4
VAPA-203ENST00000577539 H3BQV1 296 aa6.32□□□□□ -1.4
VAPA-203ENST00000577539 TREHO43280 583 aa6.32□□□□□ -1.4
VAPA-203ENST00000577539 CHGBP05060 677 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms