RNA–Protein interactions for RNA: ENST00000576713.6

NPLOC4-219, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 571 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-219ENST00000576713 ANKIB1Q9P2G1 1089 aa11.84□□□□□ -0.51
NPLOC4-219ENST00000576713 RIPOR2Q9Y4F9 1068 aa11.84□□□□□ -0.51
NPLOC4-219ENST00000576713 ZC3H4Q9UPT8 1303 aaKnown RBP11.84□□□□□ -0.51
NPLOC4-219ENST00000576713 LILRB3O75022 631 aa11.83□□□□□ -0.52
NPLOC4-219ENST00000576713 DDNO94850 711 aaPredicted RBP11.83□□□□□ -0.52
NPLOC4-219ENST00000576713 GNAI3P08754 354 aa11.83□□□□□ -0.52
NPLOC4-219ENST00000576713 RRP1P56182 461 aaKnown RBP11.83□□□□□ -0.52
NPLOC4-219ENST00000576713 MTX1Q13505 466 aa11.83□□□□□ -0.52
NPLOC4-219ENST00000576713 MVPQ14764 893 aaKnown RBP11.83□□□□□ -0.52
NPLOC4-219ENST00000576713 QPCTQ16769 361 aa11.83□□□□□ -0.52
NPLOC4-219ENST00000576713 PPP2R2DQ66LE6 453 aa11.83□□□□□ -0.52
NPLOC4-219ENST00000576713 ATG9AQ7Z3C6 839 aa11.83□□□□□ -0.52
NPLOC4-219ENST00000576713 LARGE2Q8N3Y3 721 aa11.83□□□□□ -0.52
NPLOC4-219ENST00000576713 VGLL2Q8N8G2 317 aa11.83□□□□□ -0.52
NPLOC4-219ENST00000576713 MPHOSPH8Q99549 860 aa11.83□□□□□ -0.52
NPLOC4-219ENST00000576713 DBNDD1Q9H9R9 158 aa11.83□□□□□ -0.52
NPLOC4-219ENST00000576713 GGA1Q9UJY5 639 aa11.83□□□□□ -0.52
NPLOC4-219ENST00000576713 PCDHB3Q9Y5E6 796 aa11.83□□□□□ -0.52
NPLOC4-219ENST00000576713 ZNF646O15015 1829 aaPredicted RBP11.83□□□□□ -0.52
NPLOC4-219ENST00000576713 GNAI2P04899 355 aa11.82□□□□□ -0.52
NPLOC4-219ENST00000576713 WASHC4Q2M389 1173 aa11.82□□□□□ -0.52
NPLOC4-219ENST00000576713 PRPF38BQ5VTL8 546 aaKnown RBP11.82□□□□□ -0.52
NPLOC4-219ENST00000576713 SIL1Q9H173 461 aa11.82□□□□□ -0.52
NPLOC4-219ENST00000576713 CNNM1Q9NRU3 951 aa11.82□□□□□ -0.52
NPLOC4-219ENST00000576713 SLC27A5Q9Y2P5 690 aa11.82□□□□□ -0.52
NPLOC4-219ENST00000576713 CEP350Q5VT06 3117 aa11.82□□□□□ -0.52
NPLOC4-219ENST00000576713 SCN9AQ15858 1988 aa11.81□□□□□ -0.52
NPLOC4-219ENST00000576713 GLTPD2A6NH11 291 aa11.81□□□□□ -0.52
NPLOC4-219ENST00000576713 SRGAP3O43295 1099 aa11.81□□□□□ -0.52
NPLOC4-219ENST00000576713 CXCL9Q07325 125 aa11.81□□□□□ -0.52
NPLOC4-219ENST00000576713 TAF7LQ5H9L4 462 aa11.81□□□□□ -0.52
NPLOC4-219ENST00000576713 SIRT2Q8IXJ6 389 aa11.81□□□□□ -0.52
NPLOC4-219ENST00000576713 SUPT20HQ8NEM7 779 aa11.81□□□□□ -0.52
NPLOC4-219ENST00000576713 TMX4Q9H1E5 349 aaPredicted RBP11.81□□□□□ -0.52
NPLOC4-219ENST00000576713 ZBTB40Q9NUA8 1239 aa11.81□□□□□ -0.52
NPLOC4-219ENST00000576713 ZNF804BA4D1E1 1349 aa11.81□□□□□ -0.52
NPLOC4-219ENST00000576713 MED23Q9ULK4 1368 aa11.8□□□□□ -0.52
NPLOC4-219ENST00000576713 WDR90Q96KV7 1748 aa11.8□□□□□ -0.52
NPLOC4-219ENST00000576713 SHTN1A0MZ66 631 aa11.8□□□□□ -0.52
NPLOC4-219ENST00000576713 EYA2O00167 538 aa11.8□□□□□ -0.52
NPLOC4-219ENST00000576713 ECE2O60344 883 aa11.8□□□□□ -0.52
NPLOC4-219ENST00000576713 RAD17O75943 681 aa11.8□□□□□ -0.52
NPLOC4-219ENST00000576713 ATP2B4P23634 1241 aa11.8□□□□□ -0.52
NPLOC4-219ENST00000576713 PDE3AQ14432 1141 aa11.8□□□□□ -0.52
NPLOC4-219ENST00000576713 CEP85Q6P2H3 762 aa11.8□□□□□ -0.52
NPLOC4-219ENST00000576713 NIM1KQ8IY84 436 aa11.8□□□□□ -0.52
NPLOC4-219ENST00000576713 KDM2BQ8NHM5 1336 aa11.8□□□□□ -0.52
NPLOC4-219ENST00000576713 RFC5P40937 340 aa11.79□□□□□ -0.52
NPLOC4-219ENST00000576713 BLOC1S3Q6QNY0 202 aa11.79□□□□□ -0.52
NPLOC4-219ENST00000576713 JDP2Q8WYK2 163 aa11.79□□□□□ -0.52
NPLOC4-219ENST00000576713 RNF166Q96A37 237 aaPredicted RBP11.79□□□□□ -0.52
NPLOC4-219ENST00000576713 MXD3Q9BW11 206 aa11.79□□□□□ -0.52
NPLOC4-219ENST00000576713 ANKRD2Q9GZV1 360 aa11.79□□□□□ -0.52
NPLOC4-219ENST00000576713 VPS33BQ9H267 617 aa11.79□□□□□ -0.52
NPLOC4-219ENST00000576713 RRAGCQ9HB90 399 aa11.79□□□□□ -0.52
NPLOC4-219ENST00000576713 COPRSQ9NQ92 184 aa11.79□□□□□ -0.52
NPLOC4-219ENST00000576713 ZNRF3Q9ULT6 936 aa11.79□□□□□ -0.52
NPLOC4-219ENST00000576713 LEMD3Q9Y2U8 911 aa11.79□□□□□ -0.52
NPLOC4-219ENST00000576713 TOMM70O94826 608 aa11.78□□□□□ -0.52
NPLOC4-219ENST00000576713 FGFR2P21802 821 aa11.78□□□□□ -0.52
NPLOC4-219ENST00000576713 SCNN1DP51172 638 aa11.78□□□□□ -0.52
NPLOC4-219ENST00000576713 ATP8B2P98198 1209 aa11.78□□□□□ -0.52
NPLOC4-219ENST00000576713 METTL24Q5JXM2 366 aa11.78□□□□□ -0.52
NPLOC4-219ENST00000576713 SCUBE3Q8IX30 993 aa11.78□□□□□ -0.52
NPLOC4-219ENST00000576713 SSH3Q8TE77 659 aa11.78□□□□□ -0.52
NPLOC4-219ENST00000576713 CRBNQ96SW2 442 aa11.78□□□□□ -0.52
NPLOC4-219ENST00000576713 EYA3Q99504 573 aa11.78□□□□□ -0.52
NPLOC4-219ENST00000576713 ZC3H12CQ9C0D7 883 aaKnown RBP11.78□□□□□ -0.52
NPLOC4-219ENST00000576713 DDX19BQ9UMR2 479 aa11.78□□□□□ -0.52
NPLOC4-219ENST00000576713 GJA3Q9Y6H8 435 aa11.78□□□□□ -0.52
NPLOC4-219ENST00000576713 MROH5Q6ZUA9 1318 aa11.78□□□□□ -0.52
NPLOC4-219ENST00000576713 PSMD14O00487 310 aa11.77□□□□□ -0.53
NPLOC4-219ENST00000576713 NR1I2O75469 434 aa11.77□□□□□ -0.53
NPLOC4-219ENST00000576713 SASH1O94885 1247 aa11.77□□□□□ -0.53
NPLOC4-219ENST00000576713 PDE8BO95263 885 aa11.77□□□□□ -0.53
NPLOC4-219ENST00000576713 GYG1P46976 350 aa11.77□□□□□ -0.53
NPLOC4-219ENST00000576713 MTMR2Q13614 643 aa11.77□□□□□ -0.53
NPLOC4-219ENST00000576713 SYMPKQ92797 1274 aaKnown RBP11.77□□□□□ -0.53
NPLOC4-219ENST00000576713 CIAO1O76071 339 aa11.76□□□□□ -0.53
NPLOC4-219ENST00000576713 GMPSP49915 693 aaPredicted RBP11.76□□□□□ -0.53
NPLOC4-219ENST00000576713 EIF6P56537 245 aaKnown RBP11.76□□□□□ -0.53
NPLOC4-219ENST00000576713 TFCP2Q12800 502 aa11.76□□□□□ -0.53
NPLOC4-219ENST00000576713 Q3C1V9 767 aa11.76□□□□□ -0.53
NPLOC4-219ENST00000576713 C15orf52Q6ZUT6 534 aaKnown RBP11.76□□□□□ -0.53
NPLOC4-219ENST00000576713 GPC2Q8N158 579 aa11.76□□□□□ -0.53
NPLOC4-219ENST00000576713 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.76□□□□□ -0.53
NPLOC4-219ENST00000576713 FAM84BQ96KN1 310 aaPredicted RBP11.76□□□□□ -0.53
NPLOC4-219ENST00000576713 SUPT16HQ9Y5B9 1047 aaKnown RBP11.76□□□□□ -0.53
NPLOC4-219ENST00000576713 COL1A1P02452 1464 aaPredicted RBP11.76□□□□□ -0.53
NPLOC4-219ENST00000576713 ADAMTSL1Q8N6G6 1762 aa11.75□□□□□ -0.53
NPLOC4-219ENST00000576713 PSME4Q14997 1843 aa11.75□□□□□ -0.53
NPLOC4-219ENST00000576713 SPDYE5A6NIY4 337 aa11.75□□□□□ -0.53
NPLOC4-219ENST00000576713 EGFRP00533 1210 aa11.75□□□□□ -0.53
NPLOC4-219ENST00000576713 HSPA6P17066 643 aa11.75□□□□□ -0.53
NPLOC4-219ENST00000576713 ADORA1P30542 326 aa11.75□□□□□ -0.53
NPLOC4-219ENST00000576713 EPS15P42566 896 aa11.75□□□□□ -0.53
NPLOC4-219ENST00000576713 KCNJ4P48050 445 aa11.75□□□□□ -0.53
NPLOC4-219ENST00000576713 UBE4AQ14139 1066 aa11.75□□□□□ -0.53
NPLOC4-219ENST00000576713 CIAPIN1Q6FI81 312 aa11.75□□□□□ -0.53
NPLOC4-219ENST00000576713 CD209Q9NNX6 404 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms