RNA–Protein interactions for RNA: ENST00000576222.1

PCDHGB3-201, Transcript of protocadherin gamma subfamily B, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGB3, Length 4,727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3-201ENST00000576222 FANCLQ9NW38 375 aa14.81□□□□□ -0.04
PCDHGB3-201ENST00000576222 ATP10AO60312 1499 aa14.81□□□□□ -0.04
PCDHGB3-201ENST00000576222 ACTN2P35609 894 aa14.81□□□□□ -0.04
PCDHGB3-201ENST00000576222 LONRF2Q1L5Z9 754 aa14.81□□□□□ -0.04
PCDHGB3-201ENST00000576222 FCHSD1Q86WN1 690 aa14.81□□□□□ -0.04
PCDHGB3-201ENST00000576222 SELENOOQ9BVL4 669 aa14.81□□□□□ -0.04
PCDHGB3-201ENST00000576222 ANGEL1Q9UNK9 670 aaKnown RBP14.81□□□□□ -0.04
PCDHGB3-201ENST00000576222 CTNND2Q9UQB3 1225 aa14.81□□□□□ -0.04
PCDHGB3-201ENST00000576222 GSTTP1A0A1W2PQM5 241 aa14.81□□□□□ -0.04
PCDHGB3-201ENST00000576222 CMA1P23946 247 aa14.81□□□□□ -0.04
PCDHGB3-201ENST00000576222 DDIT3P35638 169 aa14.81□□□□□ -0.04
PCDHGB3-201ENST00000576222 LONRF3Q496Y0 759 aa14.81□□□□□ -0.04
PCDHGB3-201ENST00000576222 ANKS4BQ8N8V4 417 aa14.81□□□□□ -0.04
PCDHGB3-201ENST00000576222 MORC2Q9Y6X9 1032 aaPredicted RBP14.81□□□□□ -0.04
PCDHGB3-201ENST00000576222 PHLPP2Q6ZVD8 1323 aa14.81□□□□□ -0.04
PCDHGB3-201ENST00000576222 CLASP1Q7Z460 1538 aa14.81□□□□□ -0.04
PCDHGB3-201ENST00000576222 ASIC1P78348 528 aa14.81□□□□□ -0.04
PCDHGB3-201ENST00000576222 WHAMMP3Q1A5X7 153 aa14.81□□□□□ -0.04
PCDHGB3-201ENST00000576222 ZNF274Q96GC6 653 aaPredicted RBP14.81□□□□□ -0.04
PCDHGB3-201ENST00000576222 GDAP1L1Q96MZ0 367 aa14.81□□□□□ -0.04
PCDHGB3-201ENST00000576222 E7EWF7 191 aa14.8□□□□□ -0.04
PCDHGB3-201ENST00000576222 PPFIA1Q13136 1202 aa14.8□□□□□ -0.04
PCDHGB3-201ENST00000576222 DPCR1Q3MIW9 517 aa14.8□□□□□ -0.04
PCDHGB3-201ENST00000576222 CAVIN4Q5BKX8 364 aa14.8□□□□□ -0.04
PCDHGB3-201ENST00000576222 A0A1W2PQ27 194 aa14.8□□□□□ -0.04
PCDHGB3-201ENST00000576222 A0A1W2PQ64 194 aa14.8□□□□□ -0.04
PCDHGB3-201ENST00000576222 A0A1W2PQD8 194 aa14.8□□□□□ -0.04
PCDHGB3-201ENST00000576222 STX10O60499 249 aa14.8□□□□□ -0.04
PCDHGB3-201ENST00000576222 KMT5BQ4FZB7 885 aa14.8□□□□□ -0.04
PCDHGB3-201ENST00000576222 IFIT1BQ5T764 474 aaKnown RBP14.8□□□□□ -0.04
PCDHGB3-201ENST00000576222 TCERG1LQ5VWI1 586 aa14.8□□□□□ -0.04
PCDHGB3-201ENST00000576222 DIS3L2Q8IYB7 885 aaKnown RBP14.8□□□□□ -0.04
PCDHGB3-201ENST00000576222 SPAG5Q96R06 1193 aa14.8□□□□□ -0.04
PCDHGB3-201ENST00000576222 UBA5Q9GZZ9 404 aa14.8□□□□□ -0.04
PCDHGB3-201ENST00000576222 RCOR1Q9UKL0 485 aa14.8□□□□□ -0.04
PCDHGB3-201ENST00000576222 CTDP1Q9Y5B0 961 aaPredicted RBP14.8□□□□□ -0.04
PCDHGB3-201ENST00000576222 ATP5JP18859 108 aa14.8□□□□□ -0.04
PCDHGB3-201ENST00000576222 KRT2P35908 639 aa14.8□□□□□ -0.04
PCDHGB3-201ENST00000576222 WWC3Q9ULE0 1092 aa14.8□□□□□ -0.04
PCDHGB3-201ENST00000576222 SLC4A4Q9Y6R1 1079 aa14.8□□□□□ -0.04
PCDHGB3-201ENST00000576222 SND1Q7KZF4 910 aaKnown RBP eCLIP14.8□□□□□ -0.042e-7■■■■■ 27.3
PCDHGB3-201ENST00000576222 CCDC155Q8N6L0 562 aa14.8□□□□□ -0.04
PCDHGB3-201ENST00000576222 FAM71BQ8TC56 605 aa14.8□□□□□ -0.04
PCDHGB3-201ENST00000576222 TSGA10Q9BZW7 698 aa14.8□□□□□ -0.04
PCDHGB3-201ENST00000576222 MED4Q9NPJ6 270 aa14.8□□□□□ -0.04
PCDHGB3-201ENST00000576222 HOXC9P31274 260 aa14.79□□□□□ -0.04
PCDHGB3-201ENST00000576222 MAP2K2P36507 400 aa14.79□□□□□ -0.04
PCDHGB3-201ENST00000576222 TBC1D8BQ0IIM8 1120 aa14.79□□□□□ -0.04
PCDHGB3-201ENST00000576222 SLFNL1Q499Z3 407 aa14.79□□□□□ -0.04
PCDHGB3-201ENST00000576222 WWC2Q6AWC2 1192 aa14.79□□□□□ -0.04
PCDHGB3-201ENST00000576222 EXOC4Q96A65 974 aa14.79□□□□□ -0.04
PCDHGB3-201ENST00000576222 JAKMIP2Q96AA8 810 aa14.79□□□□□ -0.04
PCDHGB3-201ENST00000576222 NSRP1Q9H0G5 558 aaKnown RBP14.79□□□□□ -0.04
PCDHGB3-201ENST00000576222 VWA3AA6NCI4 1184 aa14.79□□□□□ -0.04
PCDHGB3-201ENST00000576222 TSPY2A6NKD2 308 aa14.79□□□□□ -0.04
PCDHGB3-201ENST00000576222 ARHGAP25P42331 645 aa14.79□□□□□ -0.04
PCDHGB3-201ENST00000576222 KIAA0753Q2KHM9 967 aa14.79□□□□□ -0.04
PCDHGB3-201ENST00000576222 A0A1B0GUA9 196 aa14.79□□□□□ -0.04
PCDHGB3-201ENST00000576222 SCRN1Q12765 414 aa14.79□□□□□ -0.04
PCDHGB3-201ENST00000576222 C8orf74Q6P047 294 aa14.79□□□□□ -0.04
PCDHGB3-201ENST00000576222 DSCC1Q9BVC3 393 aa14.79□□□□□ -0.04
PCDHGB3-201ENST00000576222 BICDL2A1A5D9 508 aa14.78□□□□□ -0.04
PCDHGB3-201ENST00000576222 B4E1Z4 1266 aa14.78□□□□□ -0.04
PCDHGB3-201ENST00000576222 SRGAP1Q7Z6B7 1085 aa14.78□□□□□ -0.04
PCDHGB3-201ENST00000576222 ZNF444Q8N0Y2 327 aaPredicted RBP14.78□□□□□ -0.04
PCDHGB3-201ENST00000576222 LRRC59Q96AG4 307 aaKnown RBP14.78□□□□□ -0.04
PCDHGB3-201ENST00000576222 TMEM87BQ96K49 555 aa14.78□□□□□ -0.04
PCDHGB3-201ENST00000576222 ZNF287Q9HBT7 754 aa14.78□□□□□ -0.04
PCDHGB3-201ENST00000576222 SARM1Q6SZW1 724 aa14.78□□□□□ -0.04
PCDHGB3-201ENST00000576222 ANKRD18AQ8IVF6 992 aa14.78□□□□□ -0.04
PCDHGB3-201ENST00000576222 CCDC151A5D8V7 595 aa14.78□□□□□ -0.04
PCDHGB3-201ENST00000576222 PHKBQ93100 1093 aa14.78□□□□□ -0.04
PCDHGB3-201ENST00000576222 MYCBPQ99417 103 aaPredicted RBP14.78□□□□□ -0.04
PCDHGB3-201ENST00000576222 CDC23Q9UJX2 597 aa14.78□□□□□ -0.04
PCDHGB3-201ENST00000576222 TRPM1Q7Z4N2 1603 aa14.78□□□□□ -0.04
PCDHGB3-201ENST00000576222 HPDP32754 393 aaPredicted RBP14.78□□□□□ -0.04
PCDHGB3-201ENST00000576222 TNNC1P63316 161 aa14.78□□□□□ -0.04
PCDHGB3-201ENST00000576222 NAA25Q14CX7 972 aa14.78□□□□□ -0.04
PCDHGB3-201ENST00000576222 CCDC51Q96ER9 411 aa14.78□□□□□ -0.04
PCDHGB3-201ENST00000576222 KAT14Q9H8E8 782 aa14.78□□□□□ -0.04
PCDHGB3-201ENST00000576222 TAB2Q9NYJ8 693 aa14.78□□□□□ -0.04
PCDHGB3-201ENST00000576222 RTEL1Q9NZ71 1219 aa14.78□□□□□ -0.04
PCDHGB3-201ENST00000576222 RNMTO43148 476 aaKnown RBP14.77□□□□□ -0.04
PCDHGB3-201ENST00000576222 RPGRIP1Q96KN7 1286 aa14.77□□□□□ -0.04
PCDHGB3-201ENST00000576222 SAR1BQ9Y6B6 198 aa14.77□□□□□ -0.04
PCDHGB3-201ENST00000576222 ZNF174Q15697 407 aa14.77□□□□□ -0.04
PCDHGB3-201ENST00000576222 ANKLE2Q86XL3 938 aa14.77□□□□□ -0.04
PCDHGB3-201ENST00000576222 SEC62Q99442 399 aaKnown RBP14.77□□□□□ -0.04
PCDHGB3-201ENST00000576222 MAPK8IP1Q9UQF2 711 aa14.77□□□□□ -0.04
PCDHGB3-201ENST00000576222 SBNO1A3KN83 1393 aa14.77□□□□□ -0.04
PCDHGB3-201ENST00000576222 TAF5LO75529 589 aa14.77□□□□□ -0.05
PCDHGB3-201ENST00000576222 MCM7P33993 719 aa14.77□□□□□ -0.05
PCDHGB3-201ENST00000576222 PLA2G4DQ86XP0 818 aa14.77□□□□□ -0.05
PCDHGB3-201ENST00000576222 RSRC1Q96IZ7 334 aaKnown RBP14.77□□□□□ -0.05
PCDHGB3-201ENST00000576222 PARD6BQ9BYG5 372 aa14.77□□□□□ -0.05
PCDHGB3-201ENST00000576222 FTOQ9C0B1 505 aaKnown RBP eCLIP14.77□□□□□ -0.05
PCDHGB3-201ENST00000576222 LGR6Q9HBX8 967 aa14.77□□□□□ -0.05
PCDHGB3-201ENST00000576222 TMOD3Q9NYL9 352 aa14.77□□□□□ -0.05
PCDHGB3-201ENST00000576222 SERTAD1Q9UHV2 236 aa14.77□□□□□ -0.05
PCDHGB3-201ENST00000576222 LIG3P49916 1009 aa14.77□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms