RNA–Protein interactions for RNA: ENST00000575461.1

CALCOCO2-226, Transcript of calcium binding and coiled-coil domain 2, humanhuman

Gene CALCOCO2, Length 465 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-226ENST00000575461 ESYT3A0FGR9 886 aa11.55□□□□□ -0.56
CALCOCO2-226ENST00000575461 TBC1D8BQ0IIM8 1120 aa11.55□□□□□ -0.56
CALCOCO2-226ENST00000575461 ZNF252P-AS1Q0IIN9 211 aa11.55□□□□□ -0.56
CALCOCO2-226ENST00000575461 LRRFIP1Q32MZ4 808 aaKnown RBP11.55□□□□□ -0.56
CALCOCO2-226ENST00000575461 ZNF468Q5VIY5 522 aaPredicted RBP11.55□□□□□ -0.56
CALCOCO2-226ENST00000575461 KIAA0907Q7Z7F0 614 aaPredicted RBP11.55□□□□□ -0.56
CALCOCO2-226ENST00000575461 FAM35AQ86V20 835 aa11.55□□□□□ -0.56
CALCOCO2-226ENST00000575461 STK35Q8TDR2 534 aa11.55□□□□□ -0.56
CALCOCO2-226ENST00000575461 MICAL1Q8TDZ2 1067 aa11.55□□□□□ -0.56
CALCOCO2-226ENST00000575461 TNKS2Q9H2K2 1166 aa11.55□□□□□ -0.56
CALCOCO2-226ENST00000575461 SOBPA7XYQ1 873 aa11.54□□□□□ -0.56
CALCOCO2-226ENST00000575461 EIF4EBP3O60516 100 aaPredicted RBP11.54□□□□□ -0.56
CALCOCO2-226ENST00000575461 ESRRAP11474 423 aaPredicted RBP11.54□□□□□ -0.56
CALCOCO2-226ENST00000575461 ITGA6P23229 1130 aa11.54□□□□□ -0.56
CALCOCO2-226ENST00000575461 AP3B2Q13367 1082 aa11.54□□□□□ -0.56
CALCOCO2-226ENST00000575461 MTERF2Q49AM1 385 aa11.54□□□□□ -0.56
CALCOCO2-226ENST00000575461 KANK3Q6NY19 840 aa11.54□□□□□ -0.56
CALCOCO2-226ENST00000575461 KANSL2Q9H9L4 492 aa11.54□□□□□ -0.56
CALCOCO2-226ENST00000575461 CPB1P15086 417 aa11.53□□□□□ -0.56
CALCOCO2-226ENST00000575461 CTBSQ01459 385 aa11.53□□□□□ -0.56
CALCOCO2-226ENST00000575461 PPP2R5EQ16537 467 aa11.53□□□□□ -0.56
CALCOCO2-226ENST00000575461 C2orf27AQ580R0 203 aa11.53□□□□□ -0.56
CALCOCO2-226ENST00000575461 C16orf86Q6ZW13 317 aa11.53□□□□□ -0.56
CALCOCO2-226ENST00000575461 CACTIN-AS1Q8N1I8 211 aa11.53□□□□□ -0.56
CALCOCO2-226ENST00000575461 THAP3Q8WTV1 239 aaPredicted RBP11.53□□□□□ -0.56
CALCOCO2-226ENST00000575461 AVENQ9NQS1 362 aaPredicted RBP11.53□□□□□ -0.56
CALCOCO2-226ENST00000575461 MARCH6O60337 910 aa11.52□□□□□ -0.57
CALCOCO2-226ENST00000575461 CABP4P57796 275 aa11.52□□□□□ -0.57
CALCOCO2-226ENST00000575461 IKBKEQ14164 716 aa11.52□□□□□ -0.57
CALCOCO2-226ENST00000575461 ELMSAN1Q6PJG2 1045 aa11.52□□□□□ -0.57
CALCOCO2-226ENST00000575461 TNFRSF25Q93038 417 aa11.52□□□□□ -0.57
CALCOCO2-226ENST00000575461 ZNF669Q96BR6 464 aaPredicted RBP11.52□□□□□ -0.57
CALCOCO2-226ENST00000575461 TM9SF2Q99805 663 aa11.52□□□□□ -0.57
CALCOCO2-226ENST00000575461 CWC22Q9HCG8 908 aaKnown RBP11.52□□□□□ -0.57
CALCOCO2-226ENST00000575461 SLC6A14Q9UN76 642 aa11.52□□□□□ -0.57
CALCOCO2-226ENST00000575461 POLR3KQ9Y2Y1 108 aaPredicted RBP11.52□□□□□ -0.57
CALCOCO2-226ENST00000575461 GJB6O95452 261 aa11.51□□□□□ -0.57
CALCOCO2-226ENST00000575461 PDZD3Q86UT5 571 aa11.51□□□□□ -0.57
CALCOCO2-226ENST00000575461 JMYQ8N9B5 988 aa11.51□□□□□ -0.57
CALCOCO2-226ENST00000575461 ST13P5Q8NFI4 369 aaPredicted RBP11.51□□□□□ -0.57
CALCOCO2-226ENST00000575461 FEZ1Q99689 392 aa11.51□□□□□ -0.57
CALCOCO2-226ENST00000575461 FRRS1LQ9P0K9 344 aa11.51□□□□□ -0.57
CALCOCO2-226ENST00000575461 MEIS3P2A8K0S8 358 aa11.5□□□□□ -0.57
CALCOCO2-226ENST00000575461 DDAH1O94760 285 aa11.5□□□□□ -0.57
CALCOCO2-226ENST00000575461 GYS2P54840 703 aa11.5□□□□□ -0.57
CALCOCO2-226ENST00000575461 SQSTM1Q13501 440 aa11.5□□□□□ -0.57
CALCOCO2-226ENST00000575461 PERM1Q5SV97 790 aa11.5□□□□□ -0.57
CALCOCO2-226ENST00000575461 KIFC2Q96AC6 838 aa11.5□□□□□ -0.57
CALCOCO2-226ENST00000575461 SMG9Q9H0W8 520 aaKnown RBP11.5□□□□□ -0.57
CALCOCO2-226ENST00000575461 SLC12A7Q9Y666 1083 aa11.5□□□□□ -0.57
CALCOCO2-226ENST00000575461 GSTP1P09211 210 aaKnown RBP11.49□□□□□ -0.57
CALCOCO2-226ENST00000575461 CDC27P30260 824 aa11.49□□□□□ -0.57
CALCOCO2-226ENST00000575461 PTPN11Q06124 597 aaPredicted RBP11.49□□□□□ -0.57
CALCOCO2-226ENST00000575461 MLECQ14165 292 aa11.49□□□□□ -0.57
CALCOCO2-226ENST00000575461 ADAMTSL4Q6UY14 1074 aa11.49□□□□□ -0.57
CALCOCO2-226ENST00000575461 SYNPOQ8N3V7 929 aa11.49□□□□□ -0.57
CALCOCO2-226ENST00000575461 LACRTQ9GZZ8 138 aa11.49□□□□□ -0.57
CALCOCO2-226ENST00000575461 SOX17Q9H6I2 414 aaPredicted RBP11.49□□□□□ -0.57
CALCOCO2-226ENST00000575461 CACNA2D2Q9NY47 1150 aa11.49□□□□□ -0.57
CALCOCO2-226ENST00000575461 A0A1W2PQH9 124 aa11.48□□□□□ -0.57
CALCOCO2-226ENST00000575461 GRIN3BO60391 1043 aa11.48□□□□□ -0.57
CALCOCO2-226ENST00000575461 BMP4P12644 408 aa11.48□□□□□ -0.57
CALCOCO2-226ENST00000575461 MAP1SQ66K74 1059 aaPredicted RBP11.48□□□□□ -0.57
CALCOCO2-226ENST00000575461 TAB3Q8N5C8 712 aaPredicted RBP11.48□□□□□ -0.57
CALCOCO2-226ENST00000575461 TTC9Q92623 222 aa11.48□□□□□ -0.57
CALCOCO2-226ENST00000575461 SENP2Q9HC62 589 aa11.48□□□□□ -0.57
CALCOCO2-226ENST00000575461 TRIM33Q9UPN9 1127 aa11.48□□□□□ -0.57
CALCOCO2-226ENST00000575461 PRR36Q9H6K5 1346 aa11.48□□□□□ -0.57
CALCOCO2-226ENST00000575461 KDM2BQ8NHM5 1336 aa11.47□□□□□ -0.57
CALCOCO2-226ENST00000575461 GUCY2CP25092 1073 aa11.47□□□□□ -0.57
CALCOCO2-226ENST00000575461 HNRNPUQ00839 825 aaKnown RBP eCLIP11.47□□□□□ -0.57
CALCOCO2-226ENST00000575461 TTC6Q86TZ1 520 aa11.47□□□□□ -0.57
CALCOCO2-226ENST00000575461 FAM178BQ8IXR5 827 aa11.47□□□□□ -0.57
CALCOCO2-226ENST00000575461 TMEM40Q8WWA1 233 aa11.47□□□□□ -0.57
CALCOCO2-226ENST00000575461 LEMD3Q9Y2U8 911 aa11.47□□□□□ -0.57
CALCOCO2-226ENST00000575461 ADARB2-AS1A8MUL3 147 aa11.46□□□□□ -0.57
CALCOCO2-226ENST00000575461 NRG2O14511 850 aaPredicted RBP11.46□□□□□ -0.57
CALCOCO2-226ENST00000575461 TCEA2Q15560 299 aa11.46□□□□□ -0.57
CALCOCO2-226ENST00000575461 RUFY4Q6ZNE9 571 aa11.46□□□□□ -0.57
CALCOCO2-226ENST00000575461 ZSCAN1Q8NBB4 408 aa11.46□□□□□ -0.57
CALCOCO2-226ENST00000575461 LPIN3Q9BQK8 851 aa11.46□□□□□ -0.57
CALCOCO2-226ENST00000575461 SH2B1Q9NRF2 756 aaPredicted RBP11.46□□□□□ -0.57
CALCOCO2-226ENST00000575461 SNCAIPQ9Y6H5 919 aa11.46□□□□□ -0.57
CALCOCO2-226ENST00000575461 H3BRJ5 948 aa11.45□□□□□ -0.58
CALCOCO2-226ENST00000575461 SOX1O00570 391 aaPredicted RBP11.45□□□□□ -0.58
CALCOCO2-226ENST00000575461 ADH7P40394 386 aa11.45□□□□□ -0.58
CALCOCO2-226ENST00000575461 PCBP4P57723 403 aaKnown RBP11.45□□□□□ -0.58
CALCOCO2-226ENST00000575461 C6orf15Q6UXA7 325 aaPredicted RBP11.45□□□□□ -0.58
CALCOCO2-226ENST00000575461 NOL8Q76FK4 1167 aaKnown RBP11.45□□□□□ -0.58
CALCOCO2-226ENST00000575461 AAASQ9NRG9 546 aa11.45□□□□□ -0.58
CALCOCO2-226ENST00000575461 ZMYM5Q9UJ78 669 aa11.45□□□□□ -0.58
CALCOCO2-226ENST00000575461 NAGPAQ9UK23 515 aa11.45□□□□□ -0.58
CALCOCO2-226ENST00000575461 TACC3Q9Y6A5 838 aa11.45□□□□□ -0.58
CALCOCO2-226ENST00000575461 HTR3BO95264 441 aa11.44□□□□□ -0.58
CALCOCO2-226ENST00000575461 SSRP1Q08945 709 aaKnown RBP11.44□□□□□ -0.58
CALCOCO2-226ENST00000575461 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.44□□□□□ -0.58
CALCOCO2-226ENST00000575461 EEPD1Q7L9B9 569 aa11.44□□□□□ -0.58
CALCOCO2-226ENST00000575461 ACSBG1Q96GR2 724 aa11.44□□□□□ -0.58
CALCOCO2-226ENST00000575461 KRT82Q9NSB4 513 aa11.44□□□□□ -0.58
CALCOCO2-226ENST00000575461 PFDN2Q9UHV9 154 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms