RNA–Protein interactions for RNA: ENST00000572365.1

SF3B3-214, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-214ENST00000572365 BCO2Q9BYV7 579 aa8.09□□□□□ -1.11
SF3B3-214ENST00000572365 LATS2Q9NRM7 1088 aa8.09□□□□□ -1.11
SF3B3-214ENST00000572365 METTL5Q9NRN9 209 aaKnown RBP8.09□□□□□ -1.11
SF3B3-214ENST00000572365 SLC52A1Q9NWF4 448 aa8.09□□□□□ -1.11
SF3B3-214ENST00000572365 FAM8A1Q9UBU6 413 aa8.09□□□□□ -1.11
SF3B3-214ENST00000572365 CEP162Q5TB80 1403 aa8.09□□□□□ -1.11
SF3B3-214ENST00000572365 GLI3P10071 1580 aa8.09□□□□□ -1.11
SF3B3-214ENST00000572365 KANK1Q14678 1352 aa8.09□□□□□ -1.12
SF3B3-214ENST00000572365 KIF15Q9NS87 1388 aa8.09□□□□□ -1.12
SF3B3-214ENST00000572365 C2CD2LO14523 706 aa8.08□□□□□ -1.12
SF3B3-214ENST00000572365 GRM2Q14416 872 aa8.08□□□□□ -1.12
SF3B3-214ENST00000572365 COL13A1Q5TAT6 717 aaPredicted RBP8.08□□□□□ -1.12
SF3B3-214ENST00000572365 UNC5CLQ8IV45 518 aa8.08□□□□□ -1.12
SF3B3-214ENST00000572365 NPAS3Q8IXF0 933 aa8.08□□□□□ -1.12
SF3B3-214ENST00000572365 GLIS3Q8NEA6 775 aa8.08□□□□□ -1.12
SF3B3-214ENST00000572365 TRPM4Q8TD43 1214 aa8.08□□□□□ -1.12
SF3B3-214ENST00000572365 AVENQ9NQS1 362 aaPredicted RBP8.08□□□□□ -1.12
SF3B3-214ENST00000572365 NXF1Q9UBU9 619 aaKnown RBP8.08□□□□□ -1.12
SF3B3-214ENST00000572365 PRR12Q9ULL5 1215 aa8.08□□□□□ -1.12
SF3B3-214ENST00000572365 NCOA3Q9Y6Q9 1424 aa8.08□□□□□ -1.12
SF3B3-214ENST00000572365 MARF1Q9Y4F3 1742 aaKnown RBP8.08□□□□□ -1.12
SF3B3-214ENST00000572365 EHBP1L1Q8N3D4 1523 aa8.08□□□□□ -1.12
SF3B3-214ENST00000572365 ADGRL3Q9HAR2 1447 aa8.07□□□□□ -1.12
SF3B3-214ENST00000572365 GPLD1P80108 840 aa8.07□□□□□ -1.12
SF3B3-214ENST00000572365 HDLBPQ00341 1268 aaKnown RBP8.07□□□□□ -1.12
SF3B3-214ENST00000572365 GAS6Q14393 721 aa8.07□□□□□ -1.12
SF3B3-214ENST00000572365 NXPE4Q6UWF7 544 aa8.07□□□□□ -1.12
SF3B3-214ENST00000572365 SYT9Q86SS6 491 aa8.07□□□□□ -1.12
SF3B3-214ENST00000572365 NCAPG2Q86XI2 1143 aa8.07□□□□□ -1.12
SF3B3-214ENST00000572365 CEP120Q8N960 986 aa8.07□□□□□ -1.12
SF3B3-214ENST00000572365 PPP1R1BQ9UD71 204 aaPredicted RBP8.07□□□□□ -1.12
SF3B3-214ENST00000572365 TRAK1Q9UPV9 953 aa8.07□□□□□ -1.12
SF3B3-214ENST00000572365 DUOX2Q9NRD8 1548 aa8.07□□□□□ -1.12
SF3B3-214ENST00000572365 NOS1P29475 1434 aa8.06□□□□□ -1.12
SF3B3-214ENST00000572365 SIN3BO75182 1162 aa8.06□□□□□ -1.12
SF3B3-214ENST00000572365 BMP4P12644 408 aa8.06□□□□□ -1.12
SF3B3-214ENST00000572365 C1QTNF8P60827 252 aa8.06□□□□□ -1.12
SF3B3-214ENST00000572365 FANCCQ00597 558 aa8.06□□□□□ -1.12
SF3B3-214ENST00000572365 PCSK7Q16549 785 aa8.06□□□□□ -1.12
SF3B3-214ENST00000572365 PRPF40BQ6NWY9 871 aaKnown RBP8.06□□□□□ -1.12
SF3B3-214ENST00000572365 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.06□□□□□ -1.12
SF3B3-214ENST00000572365 CNTNAP3BQ96NU0 1288 aa8.06□□□□□ -1.12
SF3B3-214ENST00000572365 CNTNAP3Q9BZ76 1288 aa8.06□□□□□ -1.12
SF3B3-214ENST00000572365 TMEM131LA2VDJ0 1609 aa8.06□□□□□ -1.12
SF3B3-214ENST00000572365 METP08581 1390 aa8.06□□□□□ -1.12
SF3B3-214ENST00000572365 C1orf167Q5SNV9 1468 aa8.06□□□□□ -1.12
SF3B3-214ENST00000572365 TRPM2O94759 1503 aa8.05□□□□□ -1.12
SF3B3-214ENST00000572365 ZBTB42B2RXF5 422 aa8.05□□□□□ -1.12
SF3B3-214ENST00000572365 H3BM21 787 aa8.05□□□□□ -1.12
SF3B3-214ENST00000572365 USP17L7P0C7H9 530 aa8.05□□□□□ -1.12
SF3B3-214ENST00000572365 MX2P20592 715 aa8.05□□□□□ -1.12
SF3B3-214ENST00000572365 METTL16Q86W50 562 aaKnown RBP8.05□□□□□ -1.12
SF3B3-214ENST00000572365 NSUN5Q96P11 429 aaKnown RBP8.05□□□□□ -1.12
SF3B3-214ENST00000572365 ZKSCAN3Q9BRR0 538 aa8.05□□□□□ -1.12
SF3B3-214ENST00000572365 EHD4Q9H223 541 aa8.05□□□□□ -1.12
SF3B3-214ENST00000572365 DZANK1Q9NVP4 752 aa8.05□□□□□ -1.12
SF3B3-214ENST00000572365 NALCNQ8IZF0 1738 aa8.05□□□□□ -1.12
SF3B3-214ENST00000572365 USP31Q70CQ4 1352 aa8.05□□□□□ -1.12
SF3B3-214ENST00000572365 PTCH1Q13635 1447 aa8.04□□□□□ -1.12
SF3B3-214ENST00000572365 LOC102724428A0A0B4J2F2 783 aa8.04□□□□□ -1.12
SF3B3-214ENST00000572365 TRIM37O94972 964 aa8.04□□□□□ -1.12
SF3B3-214ENST00000572365 VSIG8P0DPA2 414 aa8.04□□□□□ -1.12
SF3B3-214ENST00000572365 GSTT1P30711 240 aa8.04□□□□□ -1.12
SF3B3-214ENST00000572365 ZNF76P36508 570 aa8.04□□□□□ -1.12
SF3B3-214ENST00000572365 ST13P50502 369 aaKnown RBP8.04□□□□□ -1.12
SF3B3-214ENST00000572365 SIK1P57059 783 aa8.04□□□□□ -1.12
SF3B3-214ENST00000572365 CCNJLQ8IV13 435 aa8.04□□□□□ -1.12
SF3B3-214ENST00000572365 C3orf58Q8NDZ4 430 aa8.04□□□□□ -1.12
SF3B3-214ENST00000572365 TNFRSF25Q93038 417 aa8.04□□□□□ -1.12
SF3B3-214ENST00000572365 TCF12Q99081 682 aa8.04□□□□□ -1.12
SF3B3-214ENST00000572365 OSMRQ99650 979 aa8.04□□□□□ -1.12
SF3B3-214ENST00000572365 DNAJB12Q9NXW2 375 aaKnown RBP8.04□□□□□ -1.12
SF3B3-214ENST00000572365 PPP4R2Q9NY27 417 aa8.04□□□□□ -1.12
SF3B3-214ENST00000572365 ARAFP10398 606 aa8.03□□□□□ -1.12
SF3B3-214ENST00000572365 ACPPP15309 386 aa8.03□□□□□ -1.12
SF3B3-214ENST00000572365 GPR161Q8N6U8 529 aaKnown RBP8.03□□□□□ -1.12
SF3B3-214ENST00000572365 RNF34Q969K3 372 aa8.03□□□□□ -1.12
SF3B3-214ENST00000572365 SPACA7Q96KW9 195 aa8.03□□□□□ -1.12
SF3B3-214ENST00000572365 MDFIQ99750 246 aa8.03□□□□□ -1.12
SF3B3-214ENST00000572365 LIN7BQ9HAP6 207 aa8.03□□□□□ -1.12
SF3B3-214ENST00000572365 ABCB6Q9NP58 842 aa8.03□□□□□ -1.12
SF3B3-214ENST00000572365 KLF15Q9UIH9 416 aa8.03□□□□□ -1.12
SF3B3-214ENST00000572365 NFKBIEO00221 500 aa8.02□□□□□ -1.13
SF3B3-214ENST00000572365 XRCC5P13010 732 aaKnown RBP8.02□□□□□ -1.13
SF3B3-214ENST00000572365 ADH6P28332 368 aa8.02□□□□□ -1.13
SF3B3-214ENST00000572365 PCBP4P57723 403 aaKnown RBP8.02□□□□□ -1.13
SF3B3-214ENST00000572365 TAF1CQ15572 869 aaPredicted RBP8.02□□□□□ -1.13
SF3B3-214ENST00000572365 MEI1Q5TIA1 1274 aa8.02□□□□□ -1.13
SF3B3-214ENST00000572365 ZNF787Q6DD87 383 aa8.02□□□□□ -1.13
SF3B3-214ENST00000572365 ANKRD24Q8TF21 1146 aa8.02□□□□□ -1.13
SF3B3-214ENST00000572365 UBE2OQ9C0C9 1292 aaKnown RBP8.02□□□□□ -1.13
SF3B3-214ENST00000572365 BHLHE41Q9C0J9 482 aaPredicted RBP8.02□□□□□ -1.13
SF3B3-214ENST00000572365 MBIPQ9NS73 344 aa8.02□□□□□ -1.13
SF3B3-214ENST00000572365 NSFL1CQ9UNZ2 370 aaKnown RBP8.02□□□□□ -1.13
SF3B3-214ENST00000572365 ABCC5O15440 1437 aa8.02□□□□□ -1.13
SF3B3-214ENST00000572365 GOLGB1Q14789 3259 aaKnown RBP8.01□□□□□ -1.13
SF3B3-214ENST00000572365 TMEM238LA0A1B0GVL6 79 aa8.01□□□□□ -1.13
SF3B3-214ENST00000572365 ADARB2-AS1A8MUL3 147 aa8.01□□□□□ -1.13
SF3B3-214ENST00000572365 APBA3O96018 575 aa8.01□□□□□ -1.13
SF3B3-214ENST00000572365 MAP2K3P46734 347 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms