RNA–Protein interactions for RNA: ENST00000571272.5

SCARF1-205, Transcript of scavenger receptor class F member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCARF1, Length 2,871 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-205ENST00000571272 TRIM65Q6PJ69 517 aa20.13■□□□□ 0.81
SCARF1-205ENST00000571272 FOXP4Q8IVH2 680 aaPredicted RBP20.13■□□□□ 0.81
SCARF1-205ENST00000571272 INCENPQ9NQS7 918 aa20.13■□□□□ 0.81
SCARF1-205ENST00000571272 B4E1Z4 1266 aa20.13■□□□□ 0.81
SCARF1-205ENST00000571272 TOP1P11387 765 aaKnown RBP20.13■□□□□ 0.81
SCARF1-205ENST00000571272 MCAMP43121 646 aa20.13■□□□□ 0.81
SCARF1-205ENST00000571272 BMS1Q14692 1282 aaKnown RBP20.13■□□□□ 0.81
SCARF1-205ENST00000571272 SLC9C2Q5TAH2 1124 aa20.13■□□□□ 0.81
SCARF1-205ENST00000571272 METTL16Q86W50 562 aaKnown RBP20.13■□□□□ 0.81
SCARF1-205ENST00000571272 SYNE4Q8N205 404 aa20.13■□□□□ 0.81
SCARF1-205ENST00000571272 JMYQ8N9B5 988 aa20.13■□□□□ 0.81
SCARF1-205ENST00000571272 C19orf44Q9H6X5 657 aa20.13■□□□□ 0.81
SCARF1-205ENST00000571272 CPDO75976 1380 aa20.12■□□□□ 0.81
SCARF1-205ENST00000571272 ERICH4A6NGS2 130 aa20.12■□□□□ 0.81
SCARF1-205ENST00000571272 FOXN1O15353 648 aa20.12■□□□□ 0.81
SCARF1-205ENST00000571272 OLFM4Q6UX06 510 aa20.12■□□□□ 0.81
SCARF1-205ENST00000571272 UBXN4Q92575 508 aa20.12■□□□□ 0.81
SCARF1-205ENST00000571272 PCDHA5Q9Y5H7 936 aa20.12■□□□□ 0.81
SCARF1-205ENST00000571272 KIF1AQ12756 1690 aa20.12■□□□□ 0.81
SCARF1-205ENST00000571272 CBFA2T2O43439 604 aa20.12■□□□□ 0.81
SCARF1-205ENST00000571272 APOA5Q6Q788 366 aa20.12■□□□□ 0.81
SCARF1-205ENST00000571272 CNNM3Q8NE01 707 aa20.12■□□□□ 0.81
SCARF1-205ENST00000571272 TMX1Q9H3N1 280 aa20.12■□□□□ 0.81
SCARF1-205ENST00000571272 FHOD1Q9Y613 1164 aa20.12■□□□□ 0.81
SCARF1-205ENST00000571272 PPP6R2O75170 966 aa20.11■□□□□ 0.81
SCARF1-205ENST00000571272 IDH1O75874 414 aaKnown RBP20.11■□□□□ 0.81
SCARF1-205ENST00000571272 DHX8Q14562 1220 aaKnown RBP20.11■□□□□ 0.81
SCARF1-205ENST00000571272 NFXL1Q6ZNB6 911 aa20.11■□□□□ 0.81
SCARF1-205ENST00000571272 VSTM4Q8IW00 320 aa20.11■□□□□ 0.81
SCARF1-205ENST00000571272 MNS1Q8NEH6 495 aa20.11■□□□□ 0.81
SCARF1-205ENST00000571272 MAP3K14Q99558 947 aa20.11■□□□□ 0.81
SCARF1-205ENST00000571272 GLI3P10071 1580 aa20.11■□□□□ 0.81
SCARF1-205ENST00000571272 TJP1Q07157 1748 aa20.11■□□□□ 0.81
SCARF1-205ENST00000571272 PDE4BQ07343 736 aa20.11■□□□□ 0.81
SCARF1-205ENST00000571272 IFIT5Q13325 482 aaKnown RBP20.11■□□□□ 0.81
SCARF1-205ENST00000571272 REXO1L1PQ8IX06 675 aa20.11■□□□□ 0.81
SCARF1-205ENST00000571272 SH2B2O14492 632 aaPredicted RBP20.1■□□□□ 0.81
SCARF1-205ENST00000571272 METTL24Q5JXM2 366 aa20.1■□□□□ 0.81
SCARF1-205ENST00000571272 RESP18Q5W5W9 173 aa20.1■□□□□ 0.81
SCARF1-205ENST00000571272 CARD6Q9BX69 1037 aa20.1■□□□□ 0.81
SCARF1-205ENST00000571272 KCNH3Q9ULD8 1083 aa20.1■□□□□ 0.81
SCARF1-205ENST00000571272 PHLPP2Q6ZVD8 1323 aa20.1■□□□□ 0.81
SCARF1-205ENST00000571272 SPEF2Q9C093 1822 aa20.1■□□□□ 0.81
SCARF1-205ENST00000571272 CCP110O43303 1012 aa20.1■□□□□ 0.81
SCARF1-205ENST00000571272 BMP6P22004 513 aa20.1■□□□□ 0.81
SCARF1-205ENST00000571272 CCDC102BQ68D86 513 aa20.1■□□□□ 0.81
SCARF1-205ENST00000571272 CPLX2Q6PUV4 134 aaKnown RBP20.1■□□□□ 0.81
SCARF1-205ENST00000571272 STK11IPQ8N1F8 1099 aa20.1■□□□□ 0.81
SCARF1-205ENST00000571272 PDILTQ8N807 584 aa20.1■□□□□ 0.81
SCARF1-205ENST00000571272 ISCA1Q9BUE6 129 aa20.1■□□□□ 0.81
SCARF1-205ENST00000571272 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.1■□□□□ 0.813e-6■■■■■ 34.1
SCARF1-205ENST00000571272 EPC1Q9H2F5 836 aa20.1■□□□□ 0.81
SCARF1-205ENST00000571272 CDKL5O76039 1030 aa20.09■□□□□ 0.81
SCARF1-205ENST00000571272 IARSP41252 1262 aaKnown RBP20.09■□□□□ 0.81
SCARF1-205ENST00000571272 RANBP6O60518 1105 aaKnown RBP20.09■□□□□ 0.81
SCARF1-205ENST00000571272 TUBB4AP04350 444 aa20.09■□□□□ 0.81
SCARF1-205ENST00000571272 TCIRG1Q13488 830 aa20.09■□□□□ 0.81
SCARF1-205ENST00000571272 TRIM29Q14134 588 aa20.09■□□□□ 0.81
SCARF1-205ENST00000571272 KRBA2Q6ZNG9 492 aa20.09■□□□□ 0.81
SCARF1-205ENST00000571272 INTS13Q9NVM9 706 aa20.09■□□□□ 0.81
SCARF1-205ENST00000571272 ZBTB43O43298 467 aa20.09■□□□□ 0.81
SCARF1-205ENST00000571272 PNMA6AP0CW24 399 aaPredicted RBP20.09■□□□□ 0.81
SCARF1-205ENST00000571272 ADD2P35612 726 aa20.09■□□□□ 0.81
SCARF1-205ENST00000571272 ZCRB1Q8TBF4 217 aaKnown RBP20.09■□□□□ 0.81
SCARF1-205ENST00000571272 LDHAL6AQ6ZMR3 332 aa20.08■□□□□ 0.81
SCARF1-205ENST00000571272 GNL3Q9BVP2 549 aaKnown RBP eCLIP20.08■□□□□ 0.81
SCARF1-205ENST00000571272 SLC26A6Q9BXS9 759 aa20.08■□□□□ 0.81
SCARF1-205ENST00000571272 WDR19Q8NEZ3 1342 aa20.08■□□□□ 0.8
SCARF1-205ENST00000571272 GOLGA8AA7E2F4 631 aa20.08■□□□□ 0.8
SCARF1-205ENST00000571272 ATF3P18847 181 aa20.08■□□□□ 0.8
SCARF1-205ENST00000571272 NOL10Q9BSC4 688 aaKnown RBP20.08■□□□□ 0.8
SCARF1-205ENST00000571272 PIH1D3Q9NQM4 214 aaKnown RBP20.08■□□□□ 0.8
SCARF1-205ENST00000571272 LAMB4A4D0S4 1761 aa20.07■□□□□ 0.8
SCARF1-205ENST00000571272 NTRK3Q16288 839 aa20.07■□□□□ 0.8
SCARF1-205ENST00000571272 PPP2R2CQ9Y2T4 447 aa20.07■□□□□ 0.8
SCARF1-205ENST00000571272 PARP3Q9Y6F1 533 aa20.07■□□□□ 0.8
SCARF1-205ENST00000571272 ALS2Q96Q42 1657 aa20.07■□□□□ 0.8
SCARF1-205ENST00000571272 VWA3AA6NCI4 1184 aa20.07■□□□□ 0.8
SCARF1-205ENST00000571272 SEC31AO94979 1220 aaKnown RBP20.07■□□□□ 0.8
SCARF1-205ENST00000571272 GRIN1Q05586 938 aa20.07■□□□□ 0.8
SCARF1-205ENST00000571272 ZNF827Q17R98 1081 aa20.07■□□□□ 0.8
SCARF1-205ENST00000571272 TMCO3Q6UWJ1 677 aa20.07■□□□□ 0.8
SCARF1-205ENST00000571272 UBN2Q6ZU65 1347 aa20.07■□□□□ 0.8
SCARF1-205ENST00000571272 CUTAO60888 179 aa20.06■□□□□ 0.8
SCARF1-205ENST00000571272 PLA2G4AP47712 749 aa20.06■□□□□ 0.8
SCARF1-205ENST00000571272 ADKP55263 362 aaKnown RBP20.06■□□□□ 0.8
SCARF1-205ENST00000571272 TMEM67Q5HYA8 995 aa20.06■□□□□ 0.8
SCARF1-205ENST00000571272 TMEM139Q8IV31 216 aa20.06■□□□□ 0.8
SCARF1-205ENST00000571272 FAM217BQ9NTX9 383 aaPredicted RBP20.06■□□□□ 0.8
SCARF1-205ENST00000571272 ZNF532Q9HCE3 1301 aa20.06■□□□□ 0.8
SCARF1-205ENST00000571272 NUP188Q5SRE5 1749 aa20.06■□□□□ 0.8
SCARF1-205ENST00000571272 ZSCAN12O43309 604 aa20.06■□□□□ 0.8
SCARF1-205ENST00000571272 TADA3O75528 432 aa20.06■□□□□ 0.8
SCARF1-205ENST00000571272 CDK11BP21127 795 aaKnown RBP20.06■□□□□ 0.8
SCARF1-205ENST00000571272 GPTP24298 496 aa20.06■□□□□ 0.8
SCARF1-205ENST00000571272 TOM1L2Q6ZVM7 507 aa20.06■□□□□ 0.8
SCARF1-205ENST00000571272 TRMT44Q8IYL2 757 aaKnown RBP20.06■□□□□ 0.8
SCARF1-205ENST00000571272 CCDC82Q8N4S0 544 aa20.06■□□□□ 0.8
SCARF1-205ENST00000571272 IGDCC4Q8TDY8 1250 aa20.06■□□□□ 0.8
SCARF1-205ENST00000571272 C4AP0C0L4 1744 aa20.06■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms