RNA–Protein interactions for RNA: ENST00000568373.5

SMPD3-211, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 1 (best) BASIC

Gene SMPD3, Length 2,073 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-211ENST00000568373 RTN4Q9NQC3 1192 aaKnown RBP21.25■□□□□ 0.99
SMPD3-211ENST00000568373 KLRK1P26718 216 aa21.25■□□□□ 0.99
SMPD3-211ENST00000568373 CTDSPL2Q05D32 466 aa21.25■□□□□ 0.99
SMPD3-211ENST00000568373 AKNAD1Q5T1N1 836 aa21.25■□□□□ 0.99
SMPD3-211ENST00000568373 CFAP45Q9UL16 551 aa21.25■□□□□ 0.99
SMPD3-211ENST00000568373 CPLX1O14810 134 aa21.24■□□□□ 0.99
SMPD3-211ENST00000568373 IGDCC4Q8TDY8 1250 aa21.24■□□□□ 0.99
SMPD3-211ENST00000568373 PDS5AQ29RF7 1337 aaKnown RBP21.24■□□□□ 0.99
SMPD3-211ENST00000568373 MYH13Q9UKX3 1938 aa21.24■□□□□ 0.99
SMPD3-211ENST00000568373 MAGEB6P1A0A0J9YX57 407 aa21.24■□□□□ 0.99
SMPD3-211ENST00000568373 RAB11FIP4Q86YS3 637 aa21.24■□□□□ 0.99
SMPD3-211ENST00000568373 STAG1Q8WVM7 1258 aa21.24■□□□□ 0.99
SMPD3-211ENST00000568373 KRT23Q9C075 422 aa21.24■□□□□ 0.99
SMPD3-211ENST00000568373 INCENPQ9NQS7 918 aa21.24■□□□□ 0.99
SMPD3-211ENST00000568373 UBR3Q6ZT12 1888 aa21.23■□□□□ 0.99
SMPD3-211ENST00000568373 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.23■□□□□ 0.99
SMPD3-211ENST00000568373 MFSD6Q6ZSS7 791 aa21.23■□□□□ 0.99
SMPD3-211ENST00000568373 KRT27Q7Z3Y8 459 aa21.23■□□□□ 0.99
SMPD3-211ENST00000568373 TACC3Q9Y6A5 838 aa21.23■□□□□ 0.99
SMPD3-211ENST00000568373 BRWD3Q6RI45 1802 aa21.23■□□□□ 0.99
SMPD3-211ENST00000568373 GOLGA6L4A6NEF3 574 aa21.22■□□□□ 0.99
SMPD3-211ENST00000568373 HIBADHP31937 336 aaKnown RBP21.22■□□□□ 0.99
SMPD3-211ENST00000568373 ADD1P35611 737 aaKnown RBP21.22■□□□□ 0.99
SMPD3-211ENST00000568373 APOA5Q6Q788 366 aa21.22■□□□□ 0.99
SMPD3-211ENST00000568373 SGMS1Q86VZ5 419 aa21.22■□□□□ 0.99
SMPD3-211ENST00000568373 CNBD1Q8NA66 436 aa21.22■□□□□ 0.99
SMPD3-211ENST00000568373 LY9Q9HBG7 655 aa21.22■□□□□ 0.99
SMPD3-211ENST00000568373 ZSWIM5Q9P217 1185 aa21.22■□□□□ 0.99
SMPD3-211ENST00000568373 ORC3Q9UBD5 711 aaPredicted RBP21.22■□□□□ 0.99
SMPD3-211ENST00000568373 KDM4AO75164 1064 aa21.22■□□□□ 0.99
SMPD3-211ENST00000568373 GUCY1B3Q02153 619 aa21.22■□□□□ 0.99
SMPD3-211ENST00000568373 TMEM67Q5HYA8 995 aa21.22■□□□□ 0.99
SMPD3-211ENST00000568373 RNF214Q8ND24 703 aa21.22■□□□□ 0.99
SMPD3-211ENST00000568373 RIOK1Q9BRS2 568 aaKnown RBP21.22■□□□□ 0.99
SMPD3-211ENST00000568373 LIFRP42702 1097 aa21.21■□□□□ 0.99
SMPD3-211ENST00000568373 METAP2P50579 478 aaKnown RBP eCLIP21.21■□□□□ 0.99
SMPD3-211ENST00000568373 ATL3Q6DD88 541 aa21.21■□□□□ 0.99
SMPD3-211ENST00000568373 TRIM44Q96DX7 344 aaPredicted RBP21.21■□□□□ 0.99
SMPD3-211ENST00000568373 SENP2Q9HC62 589 aa21.21■□□□□ 0.99
SMPD3-211ENST00000568373 LIG1P18858 919 aa21.2■□□□□ 0.99
SMPD3-211ENST00000568373 SLC27A3Q5K4L6 730 aa21.2■□□□□ 0.99
SMPD3-211ENST00000568373 C8orf76Q96K31 380 aa21.2■□□□□ 0.99
SMPD3-211ENST00000568373 TFCP2L1Q9NZI6 479 aa21.2■□□□□ 0.99
SMPD3-211ENST00000568373 GRAPQ13588 217 aa21.2■□□□□ 0.98
SMPD3-211ENST00000568373 GRAPLQ8TC17 118 aaPredicted RBP21.2■□□□□ 0.98
SMPD3-211ENST00000568373 ZNF384Q8TF68 577 aa21.2■□□□□ 0.98
SMPD3-211ENST00000568373 SDR42E1Q8WUS8 393 aa21.2■□□□□ 0.98
SMPD3-211ENST00000568373 PGBD1Q96JS3 809 aa21.2■□□□□ 0.98
SMPD3-211ENST00000568373 RNF41Q9H4P4 317 aaPredicted RBP21.2■□□□□ 0.98
SMPD3-211ENST00000568373 IFIT3O14879 490 aaKnown RBP21.19■□□□□ 0.98
SMPD3-211ENST00000568373 ZBTB22O15209 634 aa21.19■□□□□ 0.98
SMPD3-211ENST00000568373 ZBTB43O43298 467 aa21.19■□□□□ 0.98
SMPD3-211ENST00000568373 PPARAQ07869 468 aa21.19■□□□□ 0.98
SMPD3-211ENST00000568373 GIMAP6Q6P9H5 292 aa21.19■□□□□ 0.98
SMPD3-211ENST00000568373 NFXL1Q6ZNB6 911 aa21.19■□□□□ 0.98
SMPD3-211ENST00000568373 FBXO18Q8NFZ0 1043 aa21.19■□□□□ 0.98
SMPD3-211ENST00000568373 IRS2Q9Y4H2 1338 aa21.19■□□□□ 0.98
SMPD3-211ENST00000568373 CDKL5O76039 1030 aa21.19■□□□□ 0.98
SMPD3-211ENST00000568373 MICU3Q86XE3 530 aa21.19■□□□□ 0.98
SMPD3-211ENST00000568373 ZNF396Q96N95 335 aaPredicted RBP21.19■□□□□ 0.98
SMPD3-211ENST00000568373 PRR5LQ6MZQ0 368 aa21.18■□□□□ 0.98
SMPD3-211ENST00000568373 RGS22Q8NE09 1264 aa21.18■□□□□ 0.98
SMPD3-211ENST00000568373 NSUN4Q96CB9 384 aaKnown RBP21.18■□□□□ 0.98
SMPD3-211ENST00000568373 PDLIM2Q96JY6 352 aa21.18■□□□□ 0.98
SMPD3-211ENST00000568373 FUCA2Q9BTY2 467 aa21.18■□□□□ 0.98
SMPD3-211ENST00000568373 ANAPC4Q9UJX5 808 aa21.18■□□□□ 0.98
SMPD3-211ENST00000568373 RCOR1Q9UKL0 485 aa21.18■□□□□ 0.98
SMPD3-211ENST00000568373 GYS1P13807 737 aa21.17■□□□□ 0.98
SMPD3-211ENST00000568373 RXRAP19793 462 aa21.17■□□□□ 0.98
SMPD3-211ENST00000568373 RRP12Q5JTH9 1297 aaKnown RBP21.17■□□□□ 0.98
SMPD3-211ENST00000568373 CPLX2Q6PUV4 134 aaKnown RBP21.17■□□□□ 0.98
SMPD3-211ENST00000568373 MTA3Q9BTC8 594 aa21.17■□□□□ 0.98
SMPD3-211ENST00000568373 NUP62CLQ9H1M0 184 aa21.17■□□□□ 0.98
SMPD3-211ENST00000568373 CDC27P30260 824 aa21.17■□□□□ 0.98
SMPD3-211ENST00000568373 DYNLL1P63167 89 aaKnown RBP21.17■□□□□ 0.98
SMPD3-211ENST00000568373 CEBPZQ03701 1054 aaKnown RBP21.17■□□□□ 0.98
SMPD3-211ENST00000568373 SART3Q15020 963 aaKnown RBP21.17■□□□□ 0.98
SMPD3-211ENST00000568373 TXNRD3Q86VQ6 643 aa21.17■□□□□ 0.98
SMPD3-211ENST00000568373 USP28Q96RU2 1077 aa21.17■□□□□ 0.98
SMPD3-211ENST00000568373 BRIP1Q9BX63 1249 aa21.17■□□□□ 0.98
SMPD3-211ENST00000568373 TOMM22Q9NS69 142 aa21.17■□□□□ 0.98
SMPD3-211ENST00000568373 DACT1Q9NYF0 836 aa21.17■□□□□ 0.98
SMPD3-211ENST00000568373 SLC12A7Q9Y666 1083 aa21.17■□□□□ 0.98
SMPD3-211ENST00000568373 MECOMQ03112 1051 aa21.16■□□□□ 0.98
SMPD3-211ENST00000568373 OTUD7BQ6GQQ9 843 aa21.16■□□□□ 0.98
SMPD3-211ENST00000568373 BICD2Q8TD16 824 aa21.16■□□□□ 0.98
SMPD3-211ENST00000568373 DDX19AQ9NUU7 478 aaKnown RBP21.16■□□□□ 0.98
SMPD3-211ENST00000568373 CCDC69A6NI79 296 aa21.16■□□□□ 0.98
SMPD3-211ENST00000568373 GOLGA8AA7E2F4 631 aa21.16■□□□□ 0.98
SMPD3-211ENST00000568373 FTOQ9C0B1 505 aaKnown RBP eCLIP21.16■□□□□ 0.98
SMPD3-211ENST00000568373 ANKIB1Q9P2G1 1089 aa21.16■□□□□ 0.98
SMPD3-211ENST00000568373 LEMD3Q9Y2U8 911 aa21.16■□□□□ 0.98
SMPD3-211ENST00000568373 MAST2Q6P0Q8 1798 aa21.15■□□□□ 0.98
SMPD3-211ENST00000568373 NID2Q14112 1375 aa21.15■□□□□ 0.98
SMPD3-211ENST00000568373 MINDY4BA8MYZ0 360 aa21.15■□□□□ 0.98
SMPD3-211ENST00000568373 TRIM37O94972 964 aa21.15■□□□□ 0.98
SMPD3-211ENST00000568373 CHAF1AQ13111 956 aaPredicted RBP21.15■□□□□ 0.98
SMPD3-211ENST00000568373 TMED8Q6PL24 325 aaPredicted RBP21.15■□□□□ 0.98
SMPD3-211ENST00000568373 RRAGDQ9NQL2 400 aaPredicted RBP21.15■□□□□ 0.98
SMPD3-211ENST00000568373 BAZ2AQ9UIF9 1905 aaKnown RBP21.15■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms