RNA–Protein interactions for RNA: ENST00000564582.2

CHD9-210, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 3

Gene CHD9, Length 968 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-210ENST00000564582 NACADO15069 1562 aa7.4□□□□□ -1.22
CHD9-210ENST00000564582 NME2P22392 152 aa7.39□□□□□ -1.23
CHD9-210ENST00000564582 PDE3AQ14432 1141 aa7.39□□□□□ -1.23
CHD9-210ENST00000564582 SMG8Q8ND04 991 aaKnown RBP7.39□□□□□ -1.23
CHD9-210ENST00000564582 SSBP4Q9BWG4 385 aaPredicted RBP7.39□□□□□ -1.23
CHD9-210ENST00000564582 SUGCTQ9HAC7 445 aa7.39□□□□□ -1.23
CHD9-210ENST00000564582 RAD18Q9NS91 495 aa7.39□□□□□ -1.23
CHD9-210ENST00000564582 GAS2O43903 313 aaKnown RBP7.38□□□□□ -1.23
CHD9-210ENST00000564582 GSTP1P09211 210 aaKnown RBP7.38□□□□□ -1.23
CHD9-210ENST00000564582 SULF2Q8IWU5 870 aa7.38□□□□□ -1.23
CHD9-210ENST00000564582 C12orf50Q8NA57 414 aaPredicted RBP7.38□□□□□ -1.23
CHD9-210ENST00000564582 UTP4Q969X6 686 aaKnown RBP7.38□□□□□ -1.23
CHD9-210ENST00000564582 VTI1BQ9UEU0 232 aa7.38□□□□□ -1.23
CHD9-210ENST00000564582 CCDC9Q9Y3X0 531 aaKnown RBP7.38□□□□□ -1.23
CHD9-210ENST00000564582 DHX15O43143 795 aaKnown RBP7.37□□□□□ -1.23
CHD9-210ENST00000564582 H2AFB1P0C5Y9 115 aa7.37□□□□□ -1.23
CHD9-210ENST00000564582 H2AFB2P0C5Z0 115 aa7.37□□□□□ -1.23
CHD9-210ENST00000564582 SV2BQ7L1I2 683 aa7.37□□□□□ -1.23
CHD9-210ENST00000564582 CRELD1Q96HD1 420 aa7.37□□□□□ -1.23
CHD9-210ENST00000564582 KRT82Q9NSB4 513 aa7.37□□□□□ -1.23
CHD9-210ENST00000564582 RNF19AQ9NV58 838 aa7.37□□□□□ -1.23
CHD9-210ENST00000564582 HIF3AQ9Y2N7 669 aa7.37□□□□□ -1.23
CHD9-210ENST00000564582 TOP2AP11388 1531 aaKnown RBP7.37□□□□□ -1.23
CHD9-210ENST00000564582 FBXO24O75426 580 aa7.36□□□□□ -1.23
CHD9-210ENST00000564582 ARNTP27540 789 aa7.36□□□□□ -1.23
CHD9-210ENST00000564582 TAGLNQ01995 201 aaKnown RBP7.36□□□□□ -1.23
CHD9-210ENST00000564582 LRRC14Q15048 493 aa7.36□□□□□ -1.23
CHD9-210ENST00000564582 KCNB2Q92953 911 aa7.36□□□□□ -1.23
CHD9-210ENST00000564582 FAM46AQ96IP4 442 aaKnown RBP7.36□□□□□ -1.23
CHD9-210ENST00000564582 CCDC136Q96JN2 1154 aa7.36□□□□□ -1.23
CHD9-210ENST00000564582 FAM161BQ96MY7 647 aa7.36□□□□□ -1.23
CHD9-210ENST00000564582 UBL7Q96S82 380 aaPredicted RBP7.36□□□□□ -1.23
CHD9-210ENST00000564582 CBX8Q9HC52 389 aa7.36□□□□□ -1.23
CHD9-210ENST00000564582 WASHC2AQ641Q2 1341 aa7.35□□□□□ -1.23
CHD9-210ENST00000564582 SYNGAP1Q96PV0 1343 aa7.35□□□□□ -1.23
CHD9-210ENST00000564582 ENC1O14682 589 aa7.35□□□□□ -1.23
CHD9-210ENST00000564582 DLGAP3O95886 979 aa7.35□□□□□ -1.23
CHD9-210ENST00000564582 FURINP09958 794 aa7.35□□□□□ -1.23
CHD9-210ENST00000564582 SLFN14P0C7P3 912 aa7.35□□□□□ -1.23
CHD9-210ENST00000564582 PREPP48147 710 aa7.35□□□□□ -1.23
CHD9-210ENST00000564582 ST13P50502 369 aaKnown RBP7.35□□□□□ -1.23
CHD9-210ENST00000564582 TAF1CQ15572 869 aaPredicted RBP7.35□□□□□ -1.23
CHD9-210ENST00000564582 CCDC85BQ15834 202 aaPredicted RBP7.35□□□□□ -1.23
CHD9-210ENST00000564582 PPP1R3FQ6ZSY5 799 aaPredicted RBP7.35□□□□□ -1.23
CHD9-210ENST00000564582 MYRFLQ96LU7 910 aa7.35□□□□□ -1.23
CHD9-210ENST00000564582 YIPF2Q9BWQ6 316 aa7.35□□□□□ -1.23
CHD9-210ENST00000564582 ZC3H12CQ9C0D7 883 aaKnown RBP7.35□□□□□ -1.23
CHD9-210ENST00000564582 MAP3K1Q13233 1512 aa7.35□□□□□ -1.23
CHD9-210ENST00000564582 WASHC2CQ9Y4E1 1318 aa7.34□□□□□ -1.23
CHD9-210ENST00000564582 EIF5BO60841 1220 aaKnown RBP7.34□□□□□ -1.23
CHD9-210ENST00000564582 AOC2O75106 756 aa7.34□□□□□ -1.23
CHD9-210ENST00000564582 TIAF1O95411 115 aa7.34□□□□□ -1.23
CHD9-210ENST00000564582 ECEL1O95672 775 aa7.34□□□□□ -1.23
CHD9-210ENST00000564582 ADH5P11766 374 aa7.34□□□□□ -1.23
CHD9-210ENST00000564582 RLBP1P12271 317 aa7.34□□□□□ -1.23
CHD9-210ENST00000564582 LMNB1P20700 586 aa7.34□□□□□ -1.23
CHD9-210ENST00000564582 SOX4Q06945 474 aaPredicted RBP7.34□□□□□ -1.23
CHD9-210ENST00000564582 RSPO4Q2I0M5 234 aaPredicted RBP7.34□□□□□ -1.23
CHD9-210ENST00000564582 AKAP4Q5JQC9 854 aa7.34□□□□□ -1.23
CHD9-210ENST00000564582 NKAPLQ5M9Q1 402 aa7.34□□□□□ -1.23
CHD9-210ENST00000564582 SCARA3Q6AZY7 606 aa7.34□□□□□ -1.23
CHD9-210ENST00000564582 PRR23CQ6ZRP0 262 aa7.34□□□□□ -1.23
CHD9-210ENST00000564582 CCDC88BA6NC98 1476 aa7.34□□□□□ -1.23
CHD9-210ENST00000564582 CCNB3Q8WWL7 1395 aa7.33□□□□□ -1.24
CHD9-210ENST00000564582 K7ELQ4 463 aaPredicted RBP7.33□□□□□ -1.24
CHD9-210ENST00000564582 DYRK3O43781 588 aa7.33□□□□□ -1.24
CHD9-210ENST00000564582 CTSBP07858 339 aa7.33□□□□□ -1.24
CHD9-210ENST00000564582 CELA3AP09093 270 aa7.33□□□□□ -1.24
CHD9-210ENST00000564582 ZNF16P17020 682 aaPredicted RBP7.33□□□□□ -1.24
CHD9-210ENST00000564582 USP11P51784 963 aa7.33□□□□□ -1.24
CHD9-210ENST00000564582 MAP1SQ66K74 1059 aaPredicted RBP7.33□□□□□ -1.24
CHD9-210ENST00000564582 LLGL2Q6P1M3 1020 aa7.33□□□□□ -1.24
CHD9-210ENST00000564582 PDZD3Q86UT5 571 aa7.33□□□□□ -1.24
CHD9-210ENST00000564582 ACSBG1Q96GR2 724 aa7.33□□□□□ -1.24
CHD9-210ENST00000564582 KCNF1Q9H3M0 494 aa7.33□□□□□ -1.24
CHD9-210ENST00000564582 CCDC86Q9H6F5 360 aaKnown RBP7.33□□□□□ -1.24
CHD9-210ENST00000564582 CYP8B1Q9UNU6 501 aa7.33□□□□□ -1.24
CHD9-210ENST00000564582 AP4E1Q9UPM8 1137 aa7.33□□□□□ -1.24
CHD9-210ENST00000564582 RAXQ9Y2V3 346 aa7.33□□□□□ -1.24
CHD9-210ENST00000564582 MROH2BQ7Z745 1585 aa7.33□□□□□ -1.24
CHD9-210ENST00000564582 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP7.33□□□□□ -1.24
CHD9-210ENST00000564582 SCRIBQ14160 1630 aa7.32□□□□□ -1.24
CHD9-210ENST00000564582 BMP3P12645 472 aa7.32□□□□□ -1.24
CHD9-210ENST00000564582 LIG1P18858 919 aa7.32□□□□□ -1.24
CHD9-210ENST00000564582 PCNX4Q63HM2 1172 aa7.32□□□□□ -1.24
CHD9-210ENST00000564582 FAM20CQ8IXL6 584 aa7.32□□□□□ -1.24
CHD9-210ENST00000564582 ARMC10Q8N2F6 343 aa7.32□□□□□ -1.24
CHD9-210ENST00000564582 WDR18Q9BV38 432 aa7.32□□□□□ -1.24
CHD9-210ENST00000564582 NOC4LQ9BVI4 516 aaKnown RBP7.32□□□□□ -1.24
CHD9-210ENST00000564582 SEMA6BQ9H3T3 888 aa7.32□□□□□ -1.24
CHD9-210ENST00000564582 STOML1Q9UBI4 398 aa7.32□□□□□ -1.24
CHD9-210ENST00000564582 ERICH3Q5RHP9 1530 aa7.32□□□□□ -1.24
CHD9-210ENST00000564582 RBM47A0AV96 593 aaKnown RBP7.31□□□□□ -1.24
CHD9-210ENST00000564582 GSC2O15499 205 aa7.31□□□□□ -1.24
CHD9-210ENST00000564582 PAGE1O75459 146 aa7.31□□□□□ -1.24
CHD9-210ENST00000564582 SOGA1O94964 1423 aa7.31□□□□□ -1.24
CHD9-210ENST00000564582 TRIM37O94972 964 aa7.31□□□□□ -1.24
CHD9-210ENST00000564582 DRD2P14416 443 aa7.31□□□□□ -1.24
CHD9-210ENST00000564582 BMP6P22004 513 aa7.31□□□□□ -1.24
CHD9-210ENST00000564582 RXRBP28702 533 aa7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 166.3 ms