RNA–Protein interactions for RNA: ENST00000563207.1

USB1-208, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 5

Gene USB1, Length 464 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-208ENST00000563207 HHIPL2Q6UWX4 724 aa19.35■□□□□ 0.69
USB1-208ENST00000563207 MS4A4AQ96JQ5 239 aa19.35■□□□□ 0.69
USB1-208ENST00000563207 CFHR5Q9BXR6 569 aa19.35■□□□□ 0.69
USB1-208ENST00000563207 DAGLAQ9Y4D2 1042 aa19.35■□□□□ 0.69
USB1-208ENST00000563207 IL15P40933 162 aaPredicted RBP19.34■□□□□ 0.69
USB1-208ENST00000563207 TNNI2P48788 182 aa19.34■□□□□ 0.69
USB1-208ENST00000563207 MIGA2Q7L4E1 593 aa19.34■□□□□ 0.69
USB1-208ENST00000563207 RPAP2Q8IXW5 612 aaPredicted RBP19.34■□□□□ 0.69
USB1-208ENST00000563207 WDR66Q8TBY9 1149 aa19.34■□□□□ 0.69
USB1-208ENST00000563207 ZKSCAN4Q969J2 545 aaPredicted RBP19.34■□□□□ 0.69
USB1-208ENST00000563207 MRIQ9BWK5 157 aa19.34■□□□□ 0.69
USB1-208ENST00000563207 UNCXA6NJT0 531 aa19.33■□□□□ 0.68
USB1-208ENST00000563207 INHBEP58166 350 aa19.33■□□□□ 0.68
USB1-208ENST00000563207 MAP3K9P80192 1104 aa19.33■□□□□ 0.68
USB1-208ENST00000563207 TFCP2Q12800 502 aa19.33■□□□□ 0.68
USB1-208ENST00000563207 NFIAQ12857 509 aa19.33■□□□□ 0.68
USB1-208ENST00000563207 CRHR2Q13324 411 aa19.33■□□□□ 0.68
USB1-208ENST00000563207 CCDC102BQ68D86 513 aa19.33■□□□□ 0.68
USB1-208ENST00000563207 CDC42EP5Q6NZY7 148 aa19.33■□□□□ 0.68
USB1-208ENST00000563207 SUGT1Q9Y2Z0 365 aa19.33■□□□□ 0.68
USB1-208ENST00000563207 TESPA1A2RU30 521 aaPredicted RBP19.32■□□□□ 0.68
USB1-208ENST00000563207 TCP10Q12799 353 aa19.32■□□□□ 0.68
USB1-208ENST00000563207 NOM1Q5C9Z4 860 aaKnown RBP19.32■□□□□ 0.68
USB1-208ENST00000563207 CEP85Q6P2H3 762 aa19.32■□□□□ 0.68
USB1-208ENST00000563207 ZFPM1Q8IX07 1006 aa19.32■□□□□ 0.68
USB1-208ENST00000563207 SSH3Q8TE77 659 aa19.32■□□□□ 0.68
USB1-208ENST00000563207 BRI3BPQ8WY22 251 aa19.32■□□□□ 0.68
USB1-208ENST00000563207 OTUD5Q96G74 571 aa19.32■□□□□ 0.68
USB1-208ENST00000563207 C1orf115Q9H7X2 142 aa19.32■□□□□ 0.68
USB1-208ENST00000563207 SNCAIPQ9Y6H5 919 aa19.32■□□□□ 0.68
USB1-208ENST00000563207 MYH2Q9UKX2 1941 aa19.31■□□□□ 0.68
USB1-208ENST00000563207 MAST3O60307 1309 aa19.31■□□□□ 0.68
USB1-208ENST00000563207 PNMA6EA0A0J9YXQ4 647 aa19.31■□□□□ 0.68
USB1-208ENST00000563207 ALDH1A1P00352 501 aa19.31■□□□□ 0.68
USB1-208ENST00000563207 SLURP2P0DP57 97 aa19.31■□□□□ 0.68
USB1-208ENST00000563207 POLA2Q14181 598 aa19.31■□□□□ 0.68
USB1-208ENST00000563207 FAM83AQ86UY5 434 aa19.31■□□□□ 0.68
USB1-208ENST00000563207 CENPFP49454 3210 aa19.31■□□□□ 0.68
USB1-208ENST00000563207 AK9Q5TCS8 1911 aa19.3■□□□□ 0.68
USB1-208ENST00000563207 A0A1B0GUL7 405 aa19.3■□□□□ 0.68
USB1-208ENST00000563207 HMMRO75330 724 aa19.3■□□□□ 0.68
USB1-208ENST00000563207 LDHBP07195 334 aaKnown RBP19.3■□□□□ 0.68
USB1-208ENST00000563207 RASGRF1Q13972 1273 aa19.3■□□□□ 0.68
USB1-208ENST00000563207 FAM43AQ8N2R8 423 aa19.3■□□□□ 0.68
USB1-208ENST00000563207 WRNIP1Q96S55 665 aa19.3■□□□□ 0.68
USB1-208ENST00000563207 CRBNQ96SW2 442 aa19.3■□□□□ 0.68
USB1-208ENST00000563207 TMOD2Q9NZR1 351 aa19.3■□□□□ 0.68
USB1-208ENST00000563207 FAM198AQ9UFP1 575 aa19.3■□□□□ 0.68
USB1-208ENST00000563207 INPP5BP32019 993 aa19.29■□□□□ 0.68
USB1-208ENST00000563207 PI16Q6UXB8 463 aa19.29■□□□□ 0.68
USB1-208ENST00000563207 CD99L2Q8TCZ2 262 aa19.29■□□□□ 0.68
USB1-208ENST00000563207 XAGE2Q96GT9 111 aa19.29■□□□□ 0.68
USB1-208ENST00000563207 USP40Q9NVE5 1235 aa19.29■□□□□ 0.68
USB1-208ENST00000563207 DENND2AQ9ULE3 1009 aa19.29■□□□□ 0.68
USB1-208ENST00000563207 CSADQ9Y600 493 aa19.29■□□□□ 0.68
USB1-208ENST00000563207 ZSWIM8A7E2V4 1837 aa19.29■□□□□ 0.68
USB1-208ENST00000563207 CCL15-CCL14A0A0B4J2E2 113 aa19.28■□□□□ 0.68
USB1-208ENST00000563207 CCL15Q16663 113 aa19.28■□□□□ 0.68
USB1-208ENST00000563207 FKBP1CQ5VVH2 108 aa19.28■□□□□ 0.68
USB1-208ENST00000563207 FBXO46Q6PJ61 603 aaPredicted RBP19.28■□□□□ 0.68
USB1-208ENST00000563207 OTOP1Q7RTM1 612 aa19.28■□□□□ 0.68
USB1-208ENST00000563207 GNL3LQ9NVN8 582 aaKnown RBP19.28■□□□□ 0.68
USB1-208ENST00000563207 TRIM17Q9Y577 477 aa19.28■□□□□ 0.68
USB1-208ENST00000563207 SALL1Q9NSC2 1324 aa19.27■□□□□ 0.68
USB1-208ENST00000563207 SPDYE5A6NIY4 337 aa19.27■□□□□ 0.68
USB1-208ENST00000563207 PKN2Q16513 984 aaKnown RBP19.27■□□□□ 0.68
USB1-208ENST00000563207 ZNF384Q8TF68 577 aa19.27■□□□□ 0.68
USB1-208ENST00000563207 FAM151AQ8WW52 585 aa19.27■□□□□ 0.68
USB1-208ENST00000563207 NEUROD6Q96NK8 337 aa19.27■□□□□ 0.68
USB1-208ENST00000563207 IRF6O14896 467 aa19.26■□□□□ 0.67
USB1-208ENST00000563207 G3BP1Q13283 466 aaKnown RBP eCLIP19.26■□□□□ 0.67
USB1-208ENST00000563207 ABCF2Q9UG63 623 aa19.26■□□□□ 0.67
USB1-208ENST00000563207 NOP58Q9Y2X3 529 aaKnown RBP19.26■□□□□ 0.67
USB1-208ENST00000563207 RPAP1Q9BWH6 1393 aaPredicted RBP19.25■□□□□ 0.67
USB1-208ENST00000563207 SEMA3EO15041 775 aa19.25■□□□□ 0.67
USB1-208ENST00000563207 GTF2A2P52657 109 aa19.25■□□□□ 0.67
USB1-208ENST00000563207 HSP90AB4PQ58FF6 505 aa19.25■□□□□ 0.67
USB1-208ENST00000563207 TBC1D9Q6ZT07 1266 aa19.25■□□□□ 0.67
USB1-208ENST00000563207 SH3BP5LQ7L8J4 393 aa19.25■□□□□ 0.67
USB1-208ENST00000563207 OTUD7BQ6GQQ9 843 aa19.24■□□□□ 0.67
USB1-208ENST00000563207 ERO1BQ86YB8 467 aa19.24■□□□□ 0.67
USB1-208ENST00000563207 ZNF341Q9BYN7 854 aa19.24■□□□□ 0.67
USB1-208ENST00000563207 DDX4Q9NQI0 724 aaKnown RBP19.24■□□□□ 0.67
USB1-208ENST00000563207 HMG20BQ9P0W2 317 aa19.24■□□□□ 0.67
USB1-208ENST00000563207 BTBD19C9JJ37 291 aa19.23■□□□□ 0.67
USB1-208ENST00000563207 SURF6O75683 361 aaKnown RBP19.23■□□□□ 0.67
USB1-208ENST00000563207 ECM2O94769 699 aaPredicted RBP19.23■□□□□ 0.67
USB1-208ENST00000563207 RGS3P49796 1198 aa19.23■□□□□ 0.67
USB1-208ENST00000563207 SP3Q02447 781 aa19.23■□□□□ 0.67
USB1-208ENST00000563207 TAF1CQ15572 869 aaPredicted RBP19.23■□□□□ 0.67
USB1-208ENST00000563207 SIRT2Q8IXJ6 389 aa19.23■□□□□ 0.67
USB1-208ENST00000563207 ZNF112Q9UJU3 913 aa19.23■□□□□ 0.67
USB1-208ENST00000563207 GAKO14976 1311 aa19.23■□□□□ 0.67
USB1-208ENST00000563207 MECOMQ03112 1051 aa19.22■□□□□ 0.67
USB1-208ENST00000563207 DCAF15Q66K64 600 aa19.22■□□□□ 0.67
USB1-208ENST00000563207 DZIP1Q86YF9 867 aaKnown RBP19.22■□□□□ 0.67
USB1-208ENST00000563207 ERC1Q8IUD2 1116 aa19.22■□□□□ 0.67
USB1-208ENST00000563207 ARHGAP39Q9C0H5 1083 aa19.22■□□□□ 0.67
USB1-208ENST00000563207 AKAP2Q9Y2D5 859 aa19.22■□□□□ 0.67
USB1-208ENST00000563207 PTPN22Q9Y2R2 807 aa19.22■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms