RNA–Protein interactions for RNA: ENST00000561773.1

TIPIN-202, Transcript of TIMELESS interacting protein, humanhuman

TSL 3

Gene TIPIN, Length 729 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIPIN-202ENST00000561773 FAM163AQ96GL9 167 aaPredicted RBP13.18□□□□□ -0.3
TIPIN-202ENST00000561773 PTPN18Q99952 460 aa13.18□□□□□ -0.3
TIPIN-202ENST00000561773 VEZTQ9HBM0 779 aa13.18□□□□□ -0.3
TIPIN-202ENST00000561773 ZBTB40Q9NUA8 1239 aa13.18□□□□□ -0.3
TIPIN-202ENST00000561773 MCAMP43121 646 aa13.17□□□□□ -0.3
TIPIN-202ENST00000561773 FAM83AQ86UY5 434 aa13.17□□□□□ -0.3
TIPIN-202ENST00000561773 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.17□□□□□ -0.3
TIPIN-202ENST00000561773 WNK4Q96J92 1243 aa13.17□□□□□ -0.3
TIPIN-202ENST00000561773 MS4A4AQ96JQ5 239 aa13.17□□□□□ -0.3
TIPIN-202ENST00000561773 GPR108Q9NPR9 543 aa13.17□□□□□ -0.3
TIPIN-202ENST00000561773 SAGE1Q9NXZ1 904 aa13.17□□□□□ -0.3
TIPIN-202ENST00000561773 TLR7Q9NYK1 1049 aaKnown RBP13.17□□□□□ -0.3
TIPIN-202ENST00000561773 DENND2AQ9ULE3 1009 aa13.17□□□□□ -0.3
TIPIN-202ENST00000561773 IGF2BP3O00425 579 aaKnown RBP eCLIP13.16□□□□□ -0.3
TIPIN-202ENST00000561773 CA12O43570 354 aa13.16□□□□□ -0.3
TIPIN-202ENST00000561773 RHBDL3P58872 404 aa13.16□□□□□ -0.3
TIPIN-202ENST00000561773 MKRN3Q13064 507 aaKnown RBP13.16□□□□□ -0.3
TIPIN-202ENST00000561773 TBC1D9Q6ZT07 1266 aa13.16□□□□□ -0.3
TIPIN-202ENST00000561773 ITPRIPQ8IWB1 547 aa13.16□□□□□ -0.3
TIPIN-202ENST00000561773 EAF2Q96CJ1 260 aaPredicted RBP13.16□□□□□ -0.3
TIPIN-202ENST00000561773 DBNDD2Q9BQY9 259 aa13.16□□□□□ -0.3
TIPIN-202ENST00000561773 CFHR5Q9BXR6 569 aa13.16□□□□□ -0.3
TIPIN-202ENST00000561773 DDX4Q9NQI0 724 aaKnown RBP13.16□□□□□ -0.3
TIPIN-202ENST00000561773 DOCK1Q14185 1865 aa13.16□□□□□ -0.3
TIPIN-202ENST00000561773 RPAP1Q9BWH6 1393 aaPredicted RBP13.16□□□□□ -0.3
TIPIN-202ENST00000561773 MYH1P12882 1939 aa13.15□□□□□ -0.3
TIPIN-202ENST00000561773 MYH7P12883 1935 aa13.15□□□□□ -0.3
TIPIN-202ENST00000561773 TESPA1A2RU30 521 aaPredicted RBP13.15□□□□□ -0.3
TIPIN-202ENST00000561773 UNCXA6NJT0 531 aa13.15□□□□□ -0.3
TIPIN-202ENST00000561773 MYO1BO43795 1136 aa13.15□□□□□ -0.3
TIPIN-202ENST00000561773 FRAT2O75474 233 aaPredicted RBP13.15□□□□□ -0.3
TIPIN-202ENST00000561773 MAP3K10Q02779 954 aa13.15□□□□□ -0.3
TIPIN-202ENST00000561773 SUPT20HL1Q3ZLR7 823 aa13.15□□□□□ -0.3
TIPIN-202ENST00000561773 TNNI3KQ59H18 835 aa13.15□□□□□ -0.3
TIPIN-202ENST00000561773 ARMC9Q7Z3E5 817 aa13.15□□□□□ -0.3
TIPIN-202ENST00000561773 ZNF112Q9UJU3 913 aa13.15□□□□□ -0.3
TIPIN-202ENST00000561773 DBNLQ9UJU6 430 aaKnown RBP13.15□□□□□ -0.3
TIPIN-202ENST00000561773 RCAN3Q9UKA8 241 aa13.15□□□□□ -0.3
TIPIN-202ENST00000561773 AKAP2Q9Y2D5 859 aa13.15□□□□□ -0.3
TIPIN-202ENST00000561773 SNCAIPQ9Y6H5 919 aa13.15□□□□□ -0.3
TIPIN-202ENST00000561773 FPGT-TNNI3KV9GXZ4 949 aa13.15□□□□□ -0.3
TIPIN-202ENST00000561773 WDHD1O75717 1129 aaPredicted RBP13.14□□□□□ -0.31
TIPIN-202ENST00000561773 LDHBP07195 334 aaKnown RBP13.14□□□□□ -0.31
TIPIN-202ENST00000561773 MECOMQ03112 1051 aa13.14□□□□□ -0.31
TIPIN-202ENST00000561773 TTLL12Q14166 644 aaPredicted RBP13.14□□□□□ -0.31
TIPIN-202ENST00000561773 MVPQ14764 893 aaKnown RBP13.14□□□□□ -0.31
TIPIN-202ENST00000561773 FAM151AQ8WW52 585 aa13.14□□□□□ -0.31
TIPIN-202ENST00000561773 NSUN4Q96CB9 384 aaKnown RBP13.14□□□□□ -0.31
TIPIN-202ENST00000561773 COG6Q9Y2V7 657 aa13.14□□□□□ -0.31
TIPIN-202ENST00000561773 MAST3O60307 1309 aa13.13□□□□□ -0.31
TIPIN-202ENST00000561773 DDX60LQ5H9U9 1706 aaKnown RBP13.13□□□□□ -0.31
TIPIN-202ENST00000561773 GPR75-ASB3A0A0A6YYF3 556 aa13.13□□□□□ -0.31
TIPIN-202ENST00000561773 PHF20L1A8MW92 1017 aa13.13□□□□□ -0.31
TIPIN-202ENST00000561773 SURF6O75683 361 aaKnown RBP13.13□□□□□ -0.31
TIPIN-202ENST00000561773 TBC1D8O95759 1140 aa13.13□□□□□ -0.31
TIPIN-202ENST00000561773 CYP2E1P05181 493 aaPredicted RBP13.13□□□□□ -0.31
TIPIN-202ENST00000561773 NF2P35240 595 aa13.13□□□□□ -0.31
TIPIN-202ENST00000561773 G3BP1Q13283 466 aaKnown RBP eCLIP13.13□□□□□ -0.31
TIPIN-202ENST00000561773 VGLL4Q14135 290 aa13.13□□□□□ -0.31
TIPIN-202ENST00000561773 ADGRA1Q86SQ6 560 aa13.13□□□□□ -0.31
TIPIN-202ENST00000561773 SPATA5Q8NB90 893 aa13.13□□□□□ -0.31
TIPIN-202ENST00000561773 SLC10A4Q96EP9 437 aa13.13□□□□□ -0.31
TIPIN-202ENST00000561773 ZNF512BQ96KM6 892 aaPredicted RBP13.13□□□□□ -0.31
TIPIN-202ENST00000561773 NEUROD6Q96NK8 337 aa13.13□□□□□ -0.31
TIPIN-202ENST00000561773 IDI2Q9BXS1 227 aa13.13□□□□□ -0.31
TIPIN-202ENST00000561773 DOCK3Q8IZD9 2030 aa13.13□□□□□ -0.31
TIPIN-202ENST00000561773 MGAMO43451 1857 aa13.12□□□□□ -0.31
TIPIN-202ENST00000561773 PPP1R12BO60237 982 aaPredicted RBP13.12□□□□□ -0.31
TIPIN-202ENST00000561773 ZBTB48P10074 688 aaPredicted RBP13.12□□□□□ -0.31
TIPIN-202ENST00000561773 MOGSQ13724 837 aa13.12□□□□□ -0.31
TIPIN-202ENST00000561773 TNFAIP1Q13829 316 aa13.12□□□□□ -0.31
TIPIN-202ENST00000561773 NOM1Q5C9Z4 860 aaKnown RBP13.12□□□□□ -0.31
TIPIN-202ENST00000561773 IFNL1Q8IU54 200 aa13.12□□□□□ -0.31
TIPIN-202ENST00000561773 FTSJ3Q8IY81 847 aaKnown RBP13.12□□□□□ -0.31
TIPIN-202ENST00000561773 REM2Q8IYK8 340 aaPredicted RBP13.12□□□□□ -0.31
TIPIN-202ENST00000561773 ANKRD13AQ8IZ07 590 aa13.12□□□□□ -0.31
TIPIN-202ENST00000561773 ZKSCAN4Q969J2 545 aaPredicted RBP13.12□□□□□ -0.31
TIPIN-202ENST00000561773 ABHD8Q96I13 439 aa13.12□□□□□ -0.31
TIPIN-202ENST00000561773 MCOLN1Q9GZU1 580 aa13.12□□□□□ -0.31
TIPIN-202ENST00000561773 GNL3LQ9NVN8 582 aaKnown RBP13.12□□□□□ -0.31
TIPIN-202ENST00000561773 EXOC6BQ9Y2D4 811 aa13.12□□□□□ -0.31
TIPIN-202ENST00000561773 DDTLA6NHG4 134 aaPredicted RBP13.11□□□□□ -0.31
TIPIN-202ENST00000561773 INPP5BP32019 993 aa13.11□□□□□ -0.31
TIPIN-202ENST00000561773 MAP3K9P80192 1104 aa13.11□□□□□ -0.31
TIPIN-202ENST00000561773 TCP10Q12799 353 aa13.11□□□□□ -0.31
TIPIN-202ENST00000561773 BRI3BPQ8WY22 251 aa13.11□□□□□ -0.31
TIPIN-202ENST00000561773 BEGAINQ9BUH8 593 aa13.11□□□□□ -0.31
TIPIN-202ENST00000561773 CCDC8Q9H0W5 538 aaPredicted RBP13.11□□□□□ -0.31
TIPIN-202ENST00000561773 ELP3Q9H9T3 547 aa13.11□□□□□ -0.31
TIPIN-202ENST00000561773 PIH1D3Q9NQM4 214 aaKnown RBP13.11□□□□□ -0.31
TIPIN-202ENST00000561773 SNRKQ9NRH2 765 aa13.11□□□□□ -0.31
TIPIN-202ENST00000561773 USP40Q9NVE5 1235 aa13.11□□□□□ -0.31
TIPIN-202ENST00000561773 MROH7-TTC4A0A0A0MT08 1334 aa13.11□□□□□ -0.31
TIPIN-202ENST00000561773 SPDYE5A6NIY4 337 aa13.1□□□□□ -0.31
TIPIN-202ENST00000561773 RGS3P49796 1198 aa13.1□□□□□ -0.31
TIPIN-202ENST00000561773 RRP1BQ14684 758 aaKnown RBP13.1□□□□□ -0.31
TIPIN-202ENST00000561773 MIGA2Q7L4E1 593 aa13.1□□□□□ -0.31
TIPIN-202ENST00000561773 ZNF296Q8WUU4 475 aaPredicted RBP13.1□□□□□ -0.31
TIPIN-202ENST00000561773 OPTNQ96CV9 577 aa13.1□□□□□ -0.31
TIPIN-202ENST00000561773 ABCF2Q9UG63 623 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms